| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yfeX [H]
Identifier: 91786383
GI number: 91786383
Start: 489163
End: 490086
Strand: Direct
Name: yfeX [H]
Synonym: Bpro_0473
Alternate gene names: 91786383
Gene position: 489163-490086 (Clockwise)
Preceding gene: 91786382
Following gene: 91786384
Centisome position: 9.41
GC content: 66.88
Gene sequence:
>924_bases ATGAGCCTCTCCCAACCTGGAATTTCGCAAGCGGTGCCCACCGTCGGGCGCTATGCTTTTTTCTCGATCACAGCCCCGGC TGCCGCGCAGCCGGCGGTCCTGCGCCAAAGCCTGCAGCGCCTCGCTCCGCTGGTGGACGGCCAGGCCGTGGTGGCTGCCT TCGGCGCCAGGCTGGTTGCGGCCCTGGGCGGAACAGTCCCGGGCCTGCGCGACTTTCCGGTCCTTTCGGAGGGTGCTGTG GAGGTTCCGGCCACGCCGACCGCGCTGTGCCTGTGGCTGCGCGGCAGTGACCAGGGTGACTTGGTGTTGCTGACGCGGCG ACTGGAAAAGGCGCTGGCGCCGGCCTTTCACCTGGATCGCGTGATCGAGTCCTTTCGCCACGGCCGGGGGCCGACCGGCC ACGGCCGCGACCTCACGGGCTACGAAGATGGCACCGAAAACCCGGAAGGCGAGGCGGCCGATGCCGCCGCTTTCGTGCAG GGCCTGGGCGCGGGACTCGACGGATCGAGTTTTGTCGCTATCCAGCAGTGGCTGCATGACCTGGATGCGTTCGAAGCCAT GAGCCGGGCCGAGCAGGATAACACCGTGGGCCGGCGACGCAGCGACAACGAAGAACTGGAGGACGCACCCGAATCGTCCC ACGTCAAACGCACCGCACAGGAAAGCTTTCAACCCGAGGCTTTTGTGCTGCGCCGCTCCATGCCGTGGGCGCTGCATGCG CCGGGCGGCAGCAAGGTCGGTTTGGTGTTTGTGGCGTTTGGCTGCTCGTTCGATGCGTTTGAAGCGCAGATGCGCCGCAT GGCGGGGCTGGACGATGGCATTGTGGATGCGCTGTTTCGTATCTCCAGACCGGTCAGCGGGGCCTACCTGTGGTGTCCGC CCATGCAGGCTGGCCGGCTCGATCTGCGGCAGCTCGGCTTGTGA
Upstream 100 bases:
>100_bases TGGCGCCGCAGCTTCACGCGCTATGAAGCGATTGCGGCGTTGCGCAATGCCATTTACGCCTGCGAGTTGCCGGGTGTCAC ACGATTGTCCTGATGCAACG
Downstream 100 bases:
>100_bases TGCTGCGCCGCAAACTGGGTCTTTACCTTGCGCTGATCCGCTGGAACCGTCCGGCGGGCTGGCTGCTGCTGCTCTGGCCT ACGCTGTCGGCGCTATGGGT
Product: Dyp-type peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSLSQPGISQAVPTVGRYAFFSITAPAAAQPAVLRQSLQRLAPLVDGQAVVAAFGARLVAALGGTVPGLRDFPVLSEGAV EVPATPTALCLWLRGSDQGDLVLLTRRLEKALAPAFHLDRVIESFRHGRGPTGHGRDLTGYEDGTENPEGEAADAAAFVQ GLGAGLDGSSFVAIQQWLHDLDAFEAMSRAEQDNTVGRRRSDNEELEDAPESSHVKRTAQESFQPEAFVLRRSMPWALHA PGGSKVGLVFVAFGCSFDAFEAQMRRMAGLDDGIVDALFRISRPVSGAYLWCPPMQAGRLDLRQLGL
Sequences:
>Translated_307_residues MSLSQPGISQAVPTVGRYAFFSITAPAAAQPAVLRQSLQRLAPLVDGQAVVAAFGARLVAALGGTVPGLRDFPVLSEGAV EVPATPTALCLWLRGSDQGDLVLLTRRLEKALAPAFHLDRVIESFRHGRGPTGHGRDLTGYEDGTENPEGEAADAAAFVQ GLGAGLDGSSFVAIQQWLHDLDAFEAMSRAEQDNTVGRRRSDNEELEDAPESSHVKRTAQESFQPEAFVLRRSMPWALHA PGGSKVGLVFVAFGCSFDAFEAQMRRMAGLDDGIVDALFRISRPVSGAYLWCPPMQAGRLDLRQLGL >Mature_306_residues SLSQPGISQAVPTVGRYAFFSITAPAAAQPAVLRQSLQRLAPLVDGQAVVAAFGARLVAALGGTVPGLRDFPVLSEGAVE VPATPTALCLWLRGSDQGDLVLLTRRLEKALAPAFHLDRVIESFRHGRGPTGHGRDLTGYEDGTENPEGEAADAAAFVQG LGAGLDGSSFVAIQQWLHDLDAFEAMSRAEQDNTVGRRRSDNEELEDAPESSHVKRTAQESFQPEAFVLRRSMPWALHAP GGSKVGLVFVAFGCSFDAFEAQMRRMAGLDDGIVDALFRISRPVSGAYLWCPPMQAGRLDLRQLGL
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DyP-type peroxidase family [H]
Homologues:
Organism=Escherichia coli, GI87082102, Length=251, Percent_Identity=30.6772908366534, Blast_Score=102, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR006314 [H]
Pfam domain/function: PF04261 Dyp_perox [H]
EC number: NA
Molecular weight: Translated: 32850; Mature: 32718
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSQPGISQAVPTVGRYAFFSITAPAAAQPAVLRQSLQRLAPLVDGQAVVAAFGARLVA CCCCCCCHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ALGGTVPGLRDFPVLSEGAVEVPATPTALCLWLRGSDQGDLVLLTRRLEKALAPAFHLDR HHCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHH VIESFRHGRGPTGHGRDLTGYEDGTENPEGEAADAAAFVQGLGAGLDGSSFVAIQQWLHD HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LDAFEAMSRAEQDNTVGRRRSDNEELEDAPESSHVKRTAQESFQPEAFVLRRSMPWALHA HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEC PGGSKVGLVFVAFGCSFDAFEAQMRRMAGLDDGIVDALFRISRPVSGAYLWCPPMQAGRL CCCCCEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCH DLRQLGL HHHHHCC >Mature Secondary Structure SLSQPGISQAVPTVGRYAFFSITAPAAAQPAVLRQSLQRLAPLVDGQAVVAAFGARLVA CCCCCCHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ALGGTVPGLRDFPVLSEGAVEVPATPTALCLWLRGSDQGDLVLLTRRLEKALAPAFHLDR HHCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHH VIESFRHGRGPTGHGRDLTGYEDGTENPEGEAADAAAFVQGLGAGLDGSSFVAIQQWLHD HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LDAFEAMSRAEQDNTVGRRRSDNEELEDAPESSHVKRTAQESFQPEAFVLRRSMPWALHA HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEC PGGSKVGLVFVAFGCSFDAFEAQMRRMAGLDDGIVDALFRISRPVSGAYLWCPPMQAGRL CCCCCEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCH DLRQLGL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]