| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786374
Identifier: 91786374
GI number: 91786374
Start: 479651
End: 480181
Strand: Reverse
Name: 91786374
Synonym: Bpro_0464
Alternate gene names: NA
Gene position: 480181-479651 (Counterclockwise)
Preceding gene: 91786375
Following gene: 91786373
Centisome position: 9.23
GC content: 59.89
Gene sequence:
>531_bases ATGGGAACACTGCGATCCCTTGCGGAGGCGCTGATCAGCCGCCTGCCACCACGGCTTCAGCCCATGGCGCGCTGGCGTTT CATCAAGTTTGGCGCGGTGGGTGCCAGCGGCACGGTGATCAATATCGCCGTGCTGTATGTCGCGCAGGAGTTTTTGCTCA CCTTCATCGCAGACTTCCACTCGCGGCTCAATTACTCGATTGCACTGGCCATCACCTGCGCGACCATCAGCAACTTTTAC TGGAACCGGCGCCTGACCTGGCGGGACCGCAAGCACGAGGTCCACCATTCAGCGCTGTTCCTGTTCTTCAAATATGTGAT GGCGGCGGGCCTGTCGATTGTTGTTCAGTCCCTGCTGACCAAATGGCTGGCCATCTACCTGCACTACATCCTGGCCAACC TGGTGGCCATCGTGGTGGCCAGCGTGTGCAATTTTGTCGCCAACGACCGCATGACGTTCCGCCGGCGCGCGAAAATTCAG CCGCCCAACGCTGCCACAACGCCACCTGCCGATGTCCATGACAAGCCCTGA
Upstream 100 bases:
>100_bases CCTACTGCGACGGCGACAACCAGTGCCTCAAGGTCATTGCGCCCGCCACCGTGCTGGCCAAGGCGCGGGAATGCCTGGCC GAAACTCCGGTGACGGCCTG
Downstream 100 bases:
>100_bases GCCACTGAAGCCCCGCCTTCCCGCCCACTTCCTCTGGATAGCGCTTGCCGTCGCTGTTGCGCTGGGCTACCTGTTTGGCC TGGGCGGCGACCATATTCCC
Product: GtrA-like protein
Products: NA
Alternate protein names: GtrA-Like Protein
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MGTLRSLAEALISRLPPRLQPMARWRFIKFGAVGASGTVINIAVLYVAQEFLLTFIADFHSRLNYSIALAITCATISNFY WNRRLTWRDRKHEVHHSALFLFFKYVMAAGLSIVVQSLLTKWLAIYLHYILANLVAIVVASVCNFVANDRMTFRRRAKIQ PPNAATTPPADVHDKP
Sequences:
>Translated_176_residues MGTLRSLAEALISRLPPRLQPMARWRFIKFGAVGASGTVINIAVLYVAQEFLLTFIADFHSRLNYSIALAITCATISNFY WNRRLTWRDRKHEVHHSALFLFFKYVMAAGLSIVVQSLLTKWLAIYLHYILANLVAIVVASVCNFVANDRMTFRRRAKIQ PPNAATTPPADVHDKP >Mature_175_residues GTLRSLAEALISRLPPRLQPMARWRFIKFGAVGASGTVINIAVLYVAQEFLLTFIADFHSRLNYSIALAITCATISNFYW NRRLTWRDRKHEVHHSALFLFFKYVMAAGLSIVVQSLLTKWLAIYLHYILANLVAIVVASVCNFVANDRMTFRRRAKIQP PNAATTPPADVHDKP
Specific function: Unknown
COG id: COG2246
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19960; Mature: 19829
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLRSLAEALISRLPPRLQPMARWRFIKFGAVGASGTVINIAVLYVAQEFLLTFIADFH CCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SRLNYSIALAITCATISNFYWNRRLTWRDRKHEVHHSALFLFFKYVMAAGLSIVVQSLLT HHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KWLAIYLHYILANLVAIVVASVCNFVANDRMTFRRRAKIQPPNAATTPPADVHDKP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GTLRSLAEALISRLPPRLQPMARWRFIKFGAVGASGTVINIAVLYVAQEFLLTFIADFH CHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SRLNYSIALAITCATISNFYWNRRLTWRDRKHEVHHSALFLFFKYVMAAGLSIVVQSLLT HHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KWLAIYLHYILANLVAIVVASVCNFVANDRMTFRRRAKIQPPNAATTPPADVHDKP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA