| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786373
Identifier: 91786373
GI number: 91786373
Start: 477880
End: 479670
Strand: Reverse
Name: 91786373
Synonym: Bpro_0463
Alternate gene names: NA
Gene position: 479670-477880 (Counterclockwise)
Preceding gene: 91786374
Following gene: 91786372
Centisome position: 9.22
GC content: 64.82
Gene sequence:
>1791_bases ATGTCCATGACAAGCCCTGAGCCACTGAAGCCCCGCCTTCCCGCCCACTTCCTCTGGATAGCGCTTGCCGTCGCTGTTGC GCTGGGCTACCTGTTTGGCCTGGGCGGCGACCATATTCCCCGCCTCGGCGATGAGCTGGTGTACGCCCACATCGCGCGCC TGACGGCGGAAACCGGCCGGTGGCTGCCGCTGGTCAGCTCTTACGACTTCATGCGCAACACCAAGCCACCGCTGCTGTTC TGGCAGGCGATGGCGGCGGGCGGCTGGGGCGAGCACTGGACGCTGCTCAACCTGCGCCTGCCCAGCGTGGTCTATTCCTG GGCGATTGCGCTCATGGTGGGCCTGCTGACCTGGAAGGTGGTTCGCAGTGAGGCCACGCCCGCCCCGGAGGCAAGCCCCG GCGCCGCGACGGCCGCGGACCGCAGCAGCCGGGCGATCACCCTGGGCGCGATTGCTGCGCTGGCTTATCTCTCTTTTTTG AGCAGCTACCGTTATGGCCGGCCCTACCTCACCAGCGCGCCCGAAACCTTCTGGCTGTTCGGTGTGTTTTTTGCCCTCGC CTGGTCCCCGGCAAAACTGCTGGCCTCGCGCTGGAAGTTTCCACTGCTCGCAGGAATCACCATCGGCATCGGTTGCCTCT ACAAATCCTTCACCATGGTGGTGCCGGTCGGCTTCGGCCTGGCGCTGTGCTACCAGGTGCTGGGCGCCCGGCAAGCCCCC TGGCAGATTTTCCGGCGCGGCATCGTCATCGACACCATCAAGGTCGCCGCCATCTGCGCAATCGCCCTGGCGGTGTTTGG CTTGTGGTTCGCCGTTGACCCGCAACCGGGCGAGGTGTGGCGCGAGTTTGTGGTTGGCGAAAACGCCGGAAAATTCAAGT CATCACCCGGCTACTTCAAGGTTGCTTTGCGCGGCAGCGGCGGGTTTCTGACGATCATCACGGGCTACTTTTCAAACGCC GGGTTTTTGCTGCCCGTCGCGGTCGGCTGCATCTGGACCGCCTGGCGCAGTTACCGTCAGGGTGTGCCCGTCAGCGATGC CGAAAAAGTCCTGTGGCTCTGGCTGCTGGCGCTGGCGCTGGTGTTCCTCCTGCCCAACCAGCGGTCTGCCCGCTACCTGA TACCGGCCATGCCAGCCCTCGCGATCCTGATGGCGCTGTACTGGAGCCGCATTGCGCGCCTCTGGTTCAGCATCGCCCTG GCGCTCTGCCTGCTGGGCGCCCTCGCCATGGGCCTGATCGGATTCGGTGCGGTGCGCGCCACGCAAACCGGCTGGCTTTA TTCGCCGCTGTTCTGGCTGTTCCTGGCAGCCCTCGCCGCAGCCTGCGTCATCGGCATGGCCCAAAAAGAGTTGACCCGCC CGATTGCCGCCGCGGCCGGGTTCGCCGTATTGTTTGCGCTGGCCTGGGCCACCGCGCCGTTCAACGGAGACATCGGCCAC TTCCGCGCAGAGACCAACGCCCTGCTCAAAGGCCAGGCCGTGTCTGTCCCCAGCAACTTCAACGGTCACTTTGAGCGTTA CGAGTTCATCATTCCCGGCGCAAAAATTGTCCCCTACTTCGCGGCGCAACCGGTGGACTACCAGGATGTCAACGCCCTGC TCAACAGCACGCGCTATGCCCTGGTGCAGCGCCGGGTCGGGCAGAAACCCTGTGACGCGTGCCGCATCGTCGACGAACGC TGGGACCTGCGCTCGCGGCAGGACGCGAATGAAGGCCTGCTGGCCGTCTTCAGAACGCCCGAGACCTACCTGTATGCCAA AGAGTACCTGGTCGAACGGCTCACACCCTGA
Upstream 100 bases:
>100_bases GTGGTGGCCAGCGTGTGCAATTTTGTCGCCAACGACCGCATGACGTTCCGCCGGCGCGCGAAAATTCAGCCGCCCAACGC TGCCACAACGCCACCTGCCG
Downstream 100 bases:
>100_bases GCGCCGTCTGGCGCCCCACCTTTTTTTCAACAAGGAACTGACCATGCAATACCGCCGCCTCGGAACCAGCAACCTCAAAG TCTCCACCCTCTGCCTGGGC
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 596; Mature: 595
Protein sequence:
>596_residues MSMTSPEPLKPRLPAHFLWIALAVAVALGYLFGLGGDHIPRLGDELVYAHIARLTAETGRWLPLVSSYDFMRNTKPPLLF WQAMAAGGWGEHWTLLNLRLPSVVYSWAIALMVGLLTWKVVRSEATPAPEASPGAATAADRSSRAITLGAIAALAYLSFL SSYRYGRPYLTSAPETFWLFGVFFALAWSPAKLLASRWKFPLLAGITIGIGCLYKSFTMVVPVGFGLALCYQVLGARQAP WQIFRRGIVIDTIKVAAICAIALAVFGLWFAVDPQPGEVWREFVVGENAGKFKSSPGYFKVALRGSGGFLTIITGYFSNA GFLLPVAVGCIWTAWRSYRQGVPVSDAEKVLWLWLLALALVFLLPNQRSARYLIPAMPALAILMALYWSRIARLWFSIAL ALCLLGALAMGLIGFGAVRATQTGWLYSPLFWLFLAALAAACVIGMAQKELTRPIAAAAGFAVLFALAWATAPFNGDIGH FRAETNALLKGQAVSVPSNFNGHFERYEFIIPGAKIVPYFAAQPVDYQDVNALLNSTRYALVQRRVGQKPCDACRIVDER WDLRSRQDANEGLLAVFRTPETYLYAKEYLVERLTP
Sequences:
>Translated_596_residues MSMTSPEPLKPRLPAHFLWIALAVAVALGYLFGLGGDHIPRLGDELVYAHIARLTAETGRWLPLVSSYDFMRNTKPPLLF WQAMAAGGWGEHWTLLNLRLPSVVYSWAIALMVGLLTWKVVRSEATPAPEASPGAATAADRSSRAITLGAIAALAYLSFL SSYRYGRPYLTSAPETFWLFGVFFALAWSPAKLLASRWKFPLLAGITIGIGCLYKSFTMVVPVGFGLALCYQVLGARQAP WQIFRRGIVIDTIKVAAICAIALAVFGLWFAVDPQPGEVWREFVVGENAGKFKSSPGYFKVALRGSGGFLTIITGYFSNA GFLLPVAVGCIWTAWRSYRQGVPVSDAEKVLWLWLLALALVFLLPNQRSARYLIPAMPALAILMALYWSRIARLWFSIAL ALCLLGALAMGLIGFGAVRATQTGWLYSPLFWLFLAALAAACVIGMAQKELTRPIAAAAGFAVLFALAWATAPFNGDIGH FRAETNALLKGQAVSVPSNFNGHFERYEFIIPGAKIVPYFAAQPVDYQDVNALLNSTRYALVQRRVGQKPCDACRIVDER WDLRSRQDANEGLLAVFRTPETYLYAKEYLVERLTP >Mature_595_residues SMTSPEPLKPRLPAHFLWIALAVAVALGYLFGLGGDHIPRLGDELVYAHIARLTAETGRWLPLVSSYDFMRNTKPPLLFW QAMAAGGWGEHWTLLNLRLPSVVYSWAIALMVGLLTWKVVRSEATPAPEASPGAATAADRSSRAITLGAIAALAYLSFLS SYRYGRPYLTSAPETFWLFGVFFALAWSPAKLLASRWKFPLLAGITIGIGCLYKSFTMVVPVGFGLALCYQVLGARQAPW QIFRRGIVIDTIKVAAICAIALAVFGLWFAVDPQPGEVWREFVVGENAGKFKSSPGYFKVALRGSGGFLTIITGYFSNAG FLLPVAVGCIWTAWRSYRQGVPVSDAEKVLWLWLLALALVFLLPNQRSARYLIPAMPALAILMALYWSRIARLWFSIALA LCLLGALAMGLIGFGAVRATQTGWLYSPLFWLFLAALAAACVIGMAQKELTRPIAAAAGFAVLFALAWATAPFNGDIGHF RAETNALLKGQAVSVPSNFNGHFERYEFIIPGAKIVPYFAAQPVDYQDVNALLNSTRYALVQRRVGQKPCDACRIVDERW DLRSRQDANEGLLAVFRTPETYLYAKEYLVERLTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65525; Mature: 65394
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTSPEPLKPRLPAHFLWIALAVAVALGYLFGLGGDHIPRLGDELVYAHIARLTAETGR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC WLPLVSSYDFMRNTKPPLLFWQAMAAGGWGEHWTLLNLRLPSVVYSWAIALMVGLLTWKV CEEHHHCHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH VRSEATPAPEASPGAATAADRSSRAITLGAIAALAYLSFLSSYRYGRPYLTSAPETFWLF HHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH GVFFALAWSPAKLLASRWKFPLLAGITIGIGCLYKSFTMVVPVGFGLALCYQVLGARQAP HHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WQIFRRGIVIDTIKVAAICAIALAVFGLWFAVDPQPGEVWREFVVGENAGKFKSSPGYFK HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEE VALRGSGGFLTIITGYFSNAGFLLPVAVGCIWTAWRSYRQGVPVSDAEKVLWLWLLALAL EEEECCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VFLLPNQRSARYLIPAMPALAILMALYWSRIARLWFSIALALCLLGALAMGLIGFGAVRA HHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQTGWLYSPLFWLFLAALAAACVIGMAQKELTRPIAAAAGFAVLFALAWATAPFNGDIGH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH FRAETNALLKGQAVSVPSNFNGHFERYEFIIPGAKIVPYFAAQPVDYQDVNALLNSTRYA HHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHH LVQRRVGQKPCDACRIVDERWDLRSRQDANEGLLAVFRTPETYLYAKEYLVERLTP HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure SMTSPEPLKPRLPAHFLWIALAVAVALGYLFGLGGDHIPRLGDELVYAHIARLTAETGR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC WLPLVSSYDFMRNTKPPLLFWQAMAAGGWGEHWTLLNLRLPSVVYSWAIALMVGLLTWKV CEEHHHCHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH VRSEATPAPEASPGAATAADRSSRAITLGAIAALAYLSFLSSYRYGRPYLTSAPETFWLF HHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH GVFFALAWSPAKLLASRWKFPLLAGITIGIGCLYKSFTMVVPVGFGLALCYQVLGARQAP HHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC WQIFRRGIVIDTIKVAAICAIALAVFGLWFAVDPQPGEVWREFVVGENAGKFKSSPGYFK HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEE VALRGSGGFLTIITGYFSNAGFLLPVAVGCIWTAWRSYRQGVPVSDAEKVLWLWLLALAL EEEECCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VFLLPNQRSARYLIPAMPALAILMALYWSRIARLWFSIALALCLLGALAMGLIGFGAVRA HHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQTGWLYSPLFWLFLAALAAACVIGMAQKELTRPIAAAAGFAVLFALAWATAPFNGDIGH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH FRAETNALLKGQAVSVPSNFNGHFERYEFIIPGAKIVPYFAAQPVDYQDVNALLNSTRYA HHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHH LVQRRVGQKPCDACRIVDERWDLRSRQDANEGLLAVFRTPETYLYAKEYLVERLTP HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA