| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786359
Identifier: 91786359
GI number: 91786359
Start: 466073
End: 467017
Strand: Direct
Name: 91786359
Synonym: Bpro_0449
Alternate gene names: NA
Gene position: 466073-467017 (Clockwise)
Preceding gene: 91786356
Following gene: 91786360
Centisome position: 8.96
GC content: 62.01
Gene sequence:
>945_bases ATGGCAACTTATCCGGACCCGCAACAGTGCCCAACCTGGCAGGAGACAACCATGAGTGACGCAGACAACAATTCTTTTGC CGGCTTCGGCAAGCTTGTGCCCGGTTTTGACTTCCTGCAAAACCTGGCGAAACAGGCGGCGGACAGTGCGTCGCAAAGCA TTCCGCAGTTGCCCAAGCTGGGGAGTTGGGTCGCACCCACGCTCAATGTCGAAGAGCTGGACAAGCGCATCGACGAGCTC AAGGCCGTGCAGTTCTGGCTCGACCAGAATGCCACCGCACTCAAGGCCACCATCCAGGCGCTGGAAGTGCAGAAGATGAC CCTGGCGACGCTCCGGGGCATGAACTTCAACATGGGCGACATGGCCAACGCCTTCAAGCTCAAGGTAGCCGACGGTGTGG CCGACAAGGCCAAGACTTTTTCCGGGCTGGAGATTCCGCCTTCGGCTTTTAACGGCCATCAGGCGAATGCACAAGCCAGC GAAGACACGGCGGAAAAAGCCAGGGCCAAGGCCAAGGCAAAAGCCAAAGTGGCGGCAGCCAAATCTTCCGATGCGACTGC TGCCGCGGGCGGTGTGGTCGACCCGATGCAGTGGTGGGGCGCCCTGACCCAGCAGTTCCAGACCATTGCAGCGGATGCAA TGAAAGATGTCGCCCGAAAGACCGCCGTGGACACCACCAAAAACATGGCCGCCGGGCTGGCCAAGGATGCGGTGAAAACG GCCACCGACATGGCCACGGGTCTGGCCAAAGGCATGGCTGAAAGCGCCGGGAAAACGGTGGCCGGCGGGGCGCGTGCCGC CATGAACACCGCGCTGCGCAGTGCCCAGGACTGGCCTACACCGGCCTCCATGGCGTCGTCGGCTGCGCAATCCCCGTCAG GCCCCAAAGCCAAAACGCCGGCGCGCAAGACCGCGCGCAGTACGGTCCGAAAAACCACACCTTGA
Upstream 100 bases:
>100_bases TGTCCCGGTCGCCGTCCCGCCGTACAAAAATCGGTTGACGTGCCGCCATGACGTTGCACAATGAAGGCGCATCCTGGCCT CATTTCATGAGGCTCATGGC
Downstream 100 bases:
>100_bases ACGCCTTGAATTCGTCTGCCGGGATCCCATGAAGCTTTTTCCCTATGGCCATGCCACCCATCCGCAATGGCAGATGGCGG CCGGCCTTGTGCTCGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MATYPDPQQCPTWQETTMSDADNNSFAGFGKLVPGFDFLQNLAKQAADSASQSIPQLPKLGSWVAPTLNVEELDKRIDEL KAVQFWLDQNATALKATIQALEVQKMTLATLRGMNFNMGDMANAFKLKVADGVADKAKTFSGLEIPPSAFNGHQANAQAS EDTAEKARAKAKAKAKVAAAKSSDATAAAGGVVDPMQWWGALTQQFQTIAADAMKDVARKTAVDTTKNMAAGLAKDAVKT ATDMATGLAKGMAESAGKTVAGGARAAMNTALRSAQDWPTPASMASSAAQSPSGPKAKTPARKTARSTVRKTTP
Sequences:
>Translated_314_residues MATYPDPQQCPTWQETTMSDADNNSFAGFGKLVPGFDFLQNLAKQAADSASQSIPQLPKLGSWVAPTLNVEELDKRIDEL KAVQFWLDQNATALKATIQALEVQKMTLATLRGMNFNMGDMANAFKLKVADGVADKAKTFSGLEIPPSAFNGHQANAQAS EDTAEKARAKAKAKAKVAAAKSSDATAAAGGVVDPMQWWGALTQQFQTIAADAMKDVARKTAVDTTKNMAAGLAKDAVKT ATDMATGLAKGMAESAGKTVAGGARAAMNTALRSAQDWPTPASMASSAAQSPSGPKAKTPARKTARSTVRKTTP >Mature_313_residues ATYPDPQQCPTWQETTMSDADNNSFAGFGKLVPGFDFLQNLAKQAADSASQSIPQLPKLGSWVAPTLNVEELDKRIDELK AVQFWLDQNATALKATIQALEVQKMTLATLRGMNFNMGDMANAFKLKVADGVADKAKTFSGLEIPPSAFNGHQANAQASE DTAEKARAKAKAKAKVAAAKSSDATAAAGGVVDPMQWWGALTQQFQTIAADAMKDVARKTAVDTTKNMAAGLAKDAVKTA TDMATGLAKGMAESAGKTVAGGARAAMNTALRSAQDWPTPASMASSAAQSPSGPKAKTPARKTARSTVRKTTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32853; Mature: 32722
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATYPDPQQCPTWQETTMSDADNNSFAGFGKLVPGFDFLQNLAKQAADSASQSIPQLPKL CCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC GSWVAPTLNVEELDKRIDELKAVQFWLDQNATALKATIQALEVQKMTLATLRGMNFNMGD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MANAFKLKVADGVADKAKTFSGLEIPPSAFNGHQANAQASEDTAEKARAKAKAKAKVAAA HCCHHEEEHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KSSDATAAAGGVVDPMQWWGALTQQFQTIAADAMKDVARKTAVDTTKNMAAGLAKDAVKT CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATDMATGLAKGMAESAGKTVAGGARAAMNTALRSAQDWPTPASMASSAAQSPSGPKAKTP HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC ARKTARSTVRKTTP HHHHHHHHHHCCCC >Mature Secondary Structure ATYPDPQQCPTWQETTMSDADNNSFAGFGKLVPGFDFLQNLAKQAADSASQSIPQLPKL CCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC GSWVAPTLNVEELDKRIDELKAVQFWLDQNATALKATIQALEVQKMTLATLRGMNFNMGD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH MANAFKLKVADGVADKAKTFSGLEIPPSAFNGHQANAQASEDTAEKARAKAKAKAKVAAA HCCHHEEEHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KSSDATAAAGGVVDPMQWWGALTQQFQTIAADAMKDVARKTAVDTTKNMAAGLAKDAVKT CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATDMATGLAKGMAESAGKTVAGGARAAMNTALRSAQDWPTPASMASSAAQSPSGPKAKTP HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC ARKTARSTVRKTTP HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA