| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786360
Identifier: 91786360
GI number: 91786360
Start: 467046
End: 468338
Strand: Direct
Name: 91786360
Synonym: Bpro_0450
Alternate gene names: NA
Gene position: 467046-468338 (Clockwise)
Preceding gene: 91786359
Following gene: 91786366
Centisome position: 8.98
GC content: 67.29
Gene sequence:
>1293_bases ATGAAGCTTTTTCCCTATGGCCATGCCACCCATCCGCAATGGCAGATGGCGGCCGGCCTTGTGCTCGCCCAGTTGCGTGC CCACATGACCTTGCCCGGTTATGCCCGTGCGCCCACACTGGCATTGCTCTACATCACCGATCATTACGCCGTCCATGCGC AGGACATCCTCGATCACCTGAGCGCCGAGCTGCCCGACATCACCGACTGGAGTGGCACGGTGGGCGTGGGTATCGCGTCG AACAACGTCGAGTATTTTGACGAGCCCGCGCTGGCGGTGATGCTCTGCGAACTGCCGCACGACCAGTACCGCGTGTTTTC CGGCGTGTCGCCCTTGCCCCCGGCGGCCAGCGGCCGCTTCAAGGCGCATACCGCGCTGGTGCATGCCGATGCCGGCACCC CCGACGTTGCAGAACTGATTGACGAGATGGCCCAGCGGACCGAGAGCGGTTACGTCTTTGGCGGTCTGGCGTCGAGCCGC TCCAGCACGGTGCAGTTTGCCTTCAGCGGCCACGGCAACGTCAAGGGGCACGGCGCGGCCGGCGGTGTGTTCAACGGCGG CCTGAGTGGTGTCGCGTTCGCGCGCGACCCATCGGGCGGCATGGTCCTGATGTCGCGCATCACGCAGGGCTGCCAGCCCG TCTCGGCAAATCACGACATCACCGCCTGCGAGAGCAATGTGGTGACCGGGCTGGACGGCCAGCCGGCACTGGATGTGATG CTGGAAGATCTGAAAGTATCGCTGGACCAGCCGCGCGAGGCCCTGGCCCGGGTGCGCACGACGCTGGTGGGCCTGAGCCG CCCCGAAGACAGCCTGCATGATGCCCGCAGCCGGCGGGCGGGGCAGTTTGGCGCGGAAGTGGTGGTGCGCCACGTGATCG GACTGGACCCGGCGCGCAAAGGTATCGCGATCGCCGAAGTCCCCCACGTGGGCATGAAGCTGGCTTTTTGCGAACGCAAT GCGCAGGCCGCGCGTGCCGACCTGATTCGGGTCTGCGCCGAAATCCGCGAAGAGCTGGAGCCTGAAGAAGTCACGCTGGA TGTCGCCAGCGCCCTCGGCGGTGTGCCAGCCGACGCCGCGCCGCACCCGGCCCGGCGAATCGCCGGCGCCATCTATGTCA GCTGCTCGGGTCGCGGCGGCCCGCACTTTGGCGCGCCCAGTGCCGAGCTGCAGATCGTGCGGCGTGCGCTGGGCGATGTG CCGCTGGTGGGGTTTTTTGCGGGCGGTGAAATCGCGCGCCACCACCTGTATGGCTACACCGGCGTGCTCACGGTGTTCGC CGCGGCGGACTGA
Upstream 100 bases:
>100_bases CCGTCAGGCCCCAAAGCCAAAACGCCGGCGCGCAAGACCGCGCGCAGTACGGTCCGAAAAACCACACCTTGAACGCCTTG AATTCGTCTGCCGGGATCCC
Downstream 100 bases:
>100_bases GCGTGTGAGCGTGCTGGGGAAACCTGGGTTCAGTTTTCACTCAGTGTTTCGGTTCAGCGCTGCTACGTCCCCTCGGCGCG CATTCGTCGGCGAGAGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKLFPYGHATHPQWQMAAGLVLAQLRAHMTLPGYARAPTLALLYITDHYAVHAQDILDHLSAELPDITDWSGTVGVGIAS NNVEYFDEPALAVMLCELPHDQYRVFSGVSPLPPAASGRFKAHTALVHADAGTPDVAELIDEMAQRTESGYVFGGLASSR SSTVQFAFSGHGNVKGHGAAGGVFNGGLSGVAFARDPSGGMVLMSRITQGCQPVSANHDITACESNVVTGLDGQPALDVM LEDLKVSLDQPREALARVRTTLVGLSRPEDSLHDARSRRAGQFGAEVVVRHVIGLDPARKGIAIAEVPHVGMKLAFCERN AQAARADLIRVCAEIREELEPEEVTLDVASALGGVPADAAPHPARRIAGAIYVSCSGRGGPHFGAPSAELQIVRRALGDV PLVGFFAGGEIARHHLYGYTGVLTVFAAAD
Sequences:
>Translated_430_residues MKLFPYGHATHPQWQMAAGLVLAQLRAHMTLPGYARAPTLALLYITDHYAVHAQDILDHLSAELPDITDWSGTVGVGIAS NNVEYFDEPALAVMLCELPHDQYRVFSGVSPLPPAASGRFKAHTALVHADAGTPDVAELIDEMAQRTESGYVFGGLASSR SSTVQFAFSGHGNVKGHGAAGGVFNGGLSGVAFARDPSGGMVLMSRITQGCQPVSANHDITACESNVVTGLDGQPALDVM LEDLKVSLDQPREALARVRTTLVGLSRPEDSLHDARSRRAGQFGAEVVVRHVIGLDPARKGIAIAEVPHVGMKLAFCERN AQAARADLIRVCAEIREELEPEEVTLDVASALGGVPADAAPHPARRIAGAIYVSCSGRGGPHFGAPSAELQIVRRALGDV PLVGFFAGGEIARHHLYGYTGVLTVFAAAD >Mature_430_residues MKLFPYGHATHPQWQMAAGLVLAQLRAHMTLPGYARAPTLALLYITDHYAVHAQDILDHLSAELPDITDWSGTVGVGIAS NNVEYFDEPALAVMLCELPHDQYRVFSGVSPLPPAASGRFKAHTALVHADAGTPDVAELIDEMAQRTESGYVFGGLASSR SSTVQFAFSGHGNVKGHGAAGGVFNGGLSGVAFARDPSGGMVLMSRITQGCQPVSANHDITACESNVVTGLDGQPALDVM LEDLKVSLDQPREALARVRTTLVGLSRPEDSLHDARSRRAGQFGAEVVVRHVIGLDPARKGIAIAEVPHVGMKLAFCERN AQAARADLIRVCAEIREELEPEEVTLDVASALGGVPADAAPHPARRIAGAIYVSCSGRGGPHFGAPSAELQIVRRALGDV PLVGFFAGGEIARHHLYGYTGVLTVFAAAD
Specific function: Unknown
COG id: COG4398
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0628c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019494 - InterPro: IPR013702 - InterPro: IPR016741 [H]
Pfam domain/function: PF08495 FIST; PF10442 FIST_C [H]
EC number: NA
Molecular weight: Translated: 45348; Mature: 45348
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFPYGHATHPQWQMAAGLVLAQLRAHMTLPGYARAPTLALLYITDHYAVHAQDILDHL CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEHHHHHHHHH SAELPDITDWSGTVGVGIASNNVEYFDEPALAVMLCELPHDQYRVFSGVSPLPPAASGRF HHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCC KAHTALVHADAGTPDVAELIDEMAQRTESGYVFGGLASSRSSTVQFAFSGHGNVKGHGAA EEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCC GGVFNGGLSGVAFARDPSGGMVLMSRITQGCQPVSANHDITACESNVVTGLDGQPALDVM CCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEECCCCCEECCCCCHHHHHH LEDLKVSLDQPREALARVRTTLVGLSRPEDSLHDARSRRAGQFGAEVVVRHVIGLDPARK HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC GIAIAEVPHVGMKLAFCERNAQAARADLIRVCAEIREELEPEEVTLDVASALGGVPADAA CEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHCCCCCCCC PHPARRIAGAIYVSCSGRGGPHFGAPSAELQIVRRALGDVPLVGFFAGGEIARHHLYGYT CCHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH GVLTVFAAAD HHHHEEEECC >Mature Secondary Structure MKLFPYGHATHPQWQMAAGLVLAQLRAHMTLPGYARAPTLALLYITDHYAVHAQDILDHL CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEHHHHHHHHH SAELPDITDWSGTVGVGIASNNVEYFDEPALAVMLCELPHDQYRVFSGVSPLPPAASGRF HHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCC KAHTALVHADAGTPDVAELIDEMAQRTESGYVFGGLASSRSSTVQFAFSGHGNVKGHGAA EEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCC GGVFNGGLSGVAFARDPSGGMVLMSRITQGCQPVSANHDITACESNVVTGLDGQPALDVM CCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEECCCCCEECCCCCHHHHHH LEDLKVSLDQPREALARVRTTLVGLSRPEDSLHDARSRRAGQFGAEVVVRHVIGLDPARK HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC GIAIAEVPHVGMKLAFCERNAQAARADLIRVCAEIREELEPEEVTLDVASALGGVPADAA CEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHCCCCCCCC PHPARRIAGAIYVSCSGRGGPHFGAPSAELQIVRRALGDVPLVGFFAGGEIARHHLYGYT CCHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH GVLTVFAAAD HHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]