Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91786360

Identifier: 91786360

GI number: 91786360

Start: 467046

End: 468338

Strand: Direct

Name: 91786360

Synonym: Bpro_0450

Alternate gene names: NA

Gene position: 467046-468338 (Clockwise)

Preceding gene: 91786359

Following gene: 91786366

Centisome position: 8.98

GC content: 67.29

Gene sequence:

>1293_bases
ATGAAGCTTTTTCCCTATGGCCATGCCACCCATCCGCAATGGCAGATGGCGGCCGGCCTTGTGCTCGCCCAGTTGCGTGC
CCACATGACCTTGCCCGGTTATGCCCGTGCGCCCACACTGGCATTGCTCTACATCACCGATCATTACGCCGTCCATGCGC
AGGACATCCTCGATCACCTGAGCGCCGAGCTGCCCGACATCACCGACTGGAGTGGCACGGTGGGCGTGGGTATCGCGTCG
AACAACGTCGAGTATTTTGACGAGCCCGCGCTGGCGGTGATGCTCTGCGAACTGCCGCACGACCAGTACCGCGTGTTTTC
CGGCGTGTCGCCCTTGCCCCCGGCGGCCAGCGGCCGCTTCAAGGCGCATACCGCGCTGGTGCATGCCGATGCCGGCACCC
CCGACGTTGCAGAACTGATTGACGAGATGGCCCAGCGGACCGAGAGCGGTTACGTCTTTGGCGGTCTGGCGTCGAGCCGC
TCCAGCACGGTGCAGTTTGCCTTCAGCGGCCACGGCAACGTCAAGGGGCACGGCGCGGCCGGCGGTGTGTTCAACGGCGG
CCTGAGTGGTGTCGCGTTCGCGCGCGACCCATCGGGCGGCATGGTCCTGATGTCGCGCATCACGCAGGGCTGCCAGCCCG
TCTCGGCAAATCACGACATCACCGCCTGCGAGAGCAATGTGGTGACCGGGCTGGACGGCCAGCCGGCACTGGATGTGATG
CTGGAAGATCTGAAAGTATCGCTGGACCAGCCGCGCGAGGCCCTGGCCCGGGTGCGCACGACGCTGGTGGGCCTGAGCCG
CCCCGAAGACAGCCTGCATGATGCCCGCAGCCGGCGGGCGGGGCAGTTTGGCGCGGAAGTGGTGGTGCGCCACGTGATCG
GACTGGACCCGGCGCGCAAAGGTATCGCGATCGCCGAAGTCCCCCACGTGGGCATGAAGCTGGCTTTTTGCGAACGCAAT
GCGCAGGCCGCGCGTGCCGACCTGATTCGGGTCTGCGCCGAAATCCGCGAAGAGCTGGAGCCTGAAGAAGTCACGCTGGA
TGTCGCCAGCGCCCTCGGCGGTGTGCCAGCCGACGCCGCGCCGCACCCGGCCCGGCGAATCGCCGGCGCCATCTATGTCA
GCTGCTCGGGTCGCGGCGGCCCGCACTTTGGCGCGCCCAGTGCCGAGCTGCAGATCGTGCGGCGTGCGCTGGGCGATGTG
CCGCTGGTGGGGTTTTTTGCGGGCGGTGAAATCGCGCGCCACCACCTGTATGGCTACACCGGCGTGCTCACGGTGTTCGC
CGCGGCGGACTGA

Upstream 100 bases:

>100_bases
CCGTCAGGCCCCAAAGCCAAAACGCCGGCGCGCAAGACCGCGCGCAGTACGGTCCGAAAAACCACACCTTGAACGCCTTG
AATTCGTCTGCCGGGATCCC

Downstream 100 bases:

>100_bases
GCGTGTGAGCGTGCTGGGGAAACCTGGGTTCAGTTTTCACTCAGTGTTTCGGTTCAGCGCTGCTACGTCCCCTCGGCGCG
CATTCGTCGGCGAGAGGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKLFPYGHATHPQWQMAAGLVLAQLRAHMTLPGYARAPTLALLYITDHYAVHAQDILDHLSAELPDITDWSGTVGVGIAS
NNVEYFDEPALAVMLCELPHDQYRVFSGVSPLPPAASGRFKAHTALVHADAGTPDVAELIDEMAQRTESGYVFGGLASSR
SSTVQFAFSGHGNVKGHGAAGGVFNGGLSGVAFARDPSGGMVLMSRITQGCQPVSANHDITACESNVVTGLDGQPALDVM
LEDLKVSLDQPREALARVRTTLVGLSRPEDSLHDARSRRAGQFGAEVVVRHVIGLDPARKGIAIAEVPHVGMKLAFCERN
AQAARADLIRVCAEIREELEPEEVTLDVASALGGVPADAAPHPARRIAGAIYVSCSGRGGPHFGAPSAELQIVRRALGDV
PLVGFFAGGEIARHHLYGYTGVLTVFAAAD

Sequences:

>Translated_430_residues
MKLFPYGHATHPQWQMAAGLVLAQLRAHMTLPGYARAPTLALLYITDHYAVHAQDILDHLSAELPDITDWSGTVGVGIAS
NNVEYFDEPALAVMLCELPHDQYRVFSGVSPLPPAASGRFKAHTALVHADAGTPDVAELIDEMAQRTESGYVFGGLASSR
SSTVQFAFSGHGNVKGHGAAGGVFNGGLSGVAFARDPSGGMVLMSRITQGCQPVSANHDITACESNVVTGLDGQPALDVM
LEDLKVSLDQPREALARVRTTLVGLSRPEDSLHDARSRRAGQFGAEVVVRHVIGLDPARKGIAIAEVPHVGMKLAFCERN
AQAARADLIRVCAEIREELEPEEVTLDVASALGGVPADAAPHPARRIAGAIYVSCSGRGGPHFGAPSAELQIVRRALGDV
PLVGFFAGGEIARHHLYGYTGVLTVFAAAD
>Mature_430_residues
MKLFPYGHATHPQWQMAAGLVLAQLRAHMTLPGYARAPTLALLYITDHYAVHAQDILDHLSAELPDITDWSGTVGVGIAS
NNVEYFDEPALAVMLCELPHDQYRVFSGVSPLPPAASGRFKAHTALVHADAGTPDVAELIDEMAQRTESGYVFGGLASSR
SSTVQFAFSGHGNVKGHGAAGGVFNGGLSGVAFARDPSGGMVLMSRITQGCQPVSANHDITACESNVVTGLDGQPALDVM
LEDLKVSLDQPREALARVRTTLVGLSRPEDSLHDARSRRAGQFGAEVVVRHVIGLDPARKGIAIAEVPHVGMKLAFCERN
AQAARADLIRVCAEIREELEPEEVTLDVASALGGVPADAAPHPARRIAGAIYVSCSGRGGPHFGAPSAELQIVRRALGDV
PLVGFFAGGEIARHHLYGYTGVLTVFAAAD

Specific function: Unknown

COG id: COG4398

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv0628c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019494
- InterPro:   IPR013702
- InterPro:   IPR016741 [H]

Pfam domain/function: PF08495 FIST; PF10442 FIST_C [H]

EC number: NA

Molecular weight: Translated: 45348; Mature: 45348

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFPYGHATHPQWQMAAGLVLAQLRAHMTLPGYARAPTLALLYITDHYAVHAQDILDHL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEHHHHHHHHH
SAELPDITDWSGTVGVGIASNNVEYFDEPALAVMLCELPHDQYRVFSGVSPLPPAASGRF
HHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCC
KAHTALVHADAGTPDVAELIDEMAQRTESGYVFGGLASSRSSTVQFAFSGHGNVKGHGAA
EEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCC
GGVFNGGLSGVAFARDPSGGMVLMSRITQGCQPVSANHDITACESNVVTGLDGQPALDVM
CCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEECCCCCEECCCCCHHHHHH
LEDLKVSLDQPREALARVRTTLVGLSRPEDSLHDARSRRAGQFGAEVVVRHVIGLDPARK
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC
GIAIAEVPHVGMKLAFCERNAQAARADLIRVCAEIREELEPEEVTLDVASALGGVPADAA
CEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHCCCCCCCC
PHPARRIAGAIYVSCSGRGGPHFGAPSAELQIVRRALGDVPLVGFFAGGEIARHHLYGYT
CCHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
GVLTVFAAAD
HHHHEEEECC
>Mature Secondary Structure
MKLFPYGHATHPQWQMAAGLVLAQLRAHMTLPGYARAPTLALLYITDHYAVHAQDILDHL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCEEHHHHHHHHH
SAELPDITDWSGTVGVGIASNNVEYFDEPALAVMLCELPHDQYRVFSGVSPLPPAASGRF
HHCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCC
KAHTALVHADAGTPDVAELIDEMAQRTESGYVFGGLASSRSSTVQFAFSGHGNVKGHGAA
EEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCC
GGVFNGGLSGVAFARDPSGGMVLMSRITQGCQPVSANHDITACESNVVTGLDGQPALDVM
CCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEECCCCCEECCCCCHHHHHH
LEDLKVSLDQPREALARVRTTLVGLSRPEDSLHDARSRRAGQFGAEVVVRHVIGLDPARK
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC
GIAIAEVPHVGMKLAFCERNAQAARADLIRVCAEIREELEPEEVTLDVASALGGVPADAA
CEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHCCCCCCCC
PHPARRIAGAIYVSCSGRGGPHFGAPSAELQIVRRALGDVPLVGFFAGGEIARHHLYGYT
CCHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
GVLTVFAAAD
HHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]