| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786351
Identifier: 91786351
GI number: 91786351
Start: 458935
End: 459816
Strand: Reverse
Name: 91786351
Synonym: Bpro_0441
Alternate gene names: NA
Gene position: 459816-458935 (Counterclockwise)
Preceding gene: 91786353
Following gene: 91786348
Centisome position: 8.84
GC content: 66.1
Gene sequence:
>882_bases ATGCTTCATGTCCCTTTGCTAGCCTTGTCAGCGTTGTCAGGCTTCCCCGGTGCACTGATCTGCGTCGCCGCCATGGCGCT GGCCGGTGGCTGCGCCAGCCGCCCCGGCCCGCCGGAAGCGCCCATCCTCCAGCCCCCCAGTGGCAGTGCTGCCGCAGCCA CGGTCGCCCGCCTTGATGCATTGCTGCCCATCGATGCGCTGCTGATCGGCGAACAACACGATGCCGCAGAACACCAGCAG ATAGCGCAGCAGGTCGTCGCACGCCTGGCGGCACGCGGCCTGCTGGGGGCCCTGGCGCTGGAAATGGCCGATGCCGGGGT GAGCACCGCCGCTCTGCAGCCCAGCGCCTCCGAAGAACAGACACGCCATGCGCTGAAATGGAACGACAAGGCCTGGCCCT GGACGGCGTACGGACCGGCCGTGATGACAGCCGTGCGCGCCGGCGTGCCGGTGCTGGGCGCCAACCTGCCGCGCGCGCAG ATGCAAGGCAGCATGGACGACAGCAAGCTCGACGTTCAATTGCCCGGCCCGGCGCTGAAGGCGCAGCAGCAGCTGATTCG CCTTGGCCATTGCAACCTGCTGCCCGAGAGCCAGATCACGCCGATGACGCGCGTCCAGATTGCCAGGGACATCACCATGG CCCATACCTTGAGTCAGGCGGCACTGCCCGGCAAGGTGGTGGTGTTGCTGGCCGGCAGCGGCCATGTGGACCGCCACCTG GGTGTGCCGCAGCACCTGCCCTCGAACCTCAGTAGTAAGTCTATCGGCCTCCTTGCCGAAACACTGCGGAACGCCACTGA ACACATAGCAAAATTTGATGCGATTTGGCCCGCACGGCCGGCGCCCGAGAAAGACTATTGCGCCGAATTCAGGATGCGTT GA
Upstream 100 bases:
>100_bases TAGGCGTTTGGCAGCGTCAGGAAGCATGGACGTGTAAGCGGAAAATGACAAGTTGGAAGCATGCCGGGCGGAGCCGGGCC GAAGGCATTAGTATCCACCG
Downstream 100 bases:
>100_bases CAGACCCGATCTGCGCACGTGCAACGACCATCACGGAGGGACGGCCGGATTACCTAACCTGGATAAAACCGGGCATGCCC ACGGGGTCCTCCTGAAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MLHVPLLALSALSGFPGALICVAAMALAGGCASRPGPPEAPILQPPSGSAAAATVARLDALLPIDALLIGEQHDAAEHQQ IAQQVVARLAARGLLGALALEMADAGVSTAALQPSASEEQTRHALKWNDKAWPWTAYGPAVMTAVRAGVPVLGANLPRAQ MQGSMDDSKLDVQLPGPALKAQQQLIRLGHCNLLPESQITPMTRVQIARDITMAHTLSQAALPGKVVVLLAGSGHVDRHL GVPQHLPSNLSSKSIGLLAETLRNATEHIAKFDAIWPARPAPEKDYCAEFRMR
Sequences:
>Translated_293_residues MLHVPLLALSALSGFPGALICVAAMALAGGCASRPGPPEAPILQPPSGSAAAATVARLDALLPIDALLIGEQHDAAEHQQ IAQQVVARLAARGLLGALALEMADAGVSTAALQPSASEEQTRHALKWNDKAWPWTAYGPAVMTAVRAGVPVLGANLPRAQ MQGSMDDSKLDVQLPGPALKAQQQLIRLGHCNLLPESQITPMTRVQIARDITMAHTLSQAALPGKVVVLLAGSGHVDRHL GVPQHLPSNLSSKSIGLLAETLRNATEHIAKFDAIWPARPAPEKDYCAEFRMR >Mature_293_residues MLHVPLLALSALSGFPGALICVAAMALAGGCASRPGPPEAPILQPPSGSAAAATVARLDALLPIDALLIGEQHDAAEHQQ IAQQVVARLAARGLLGALALEMADAGVSTAALQPSASEEQTRHALKWNDKAWPWTAYGPAVMTAVRAGVPVLGANLPRAQ MQGSMDDSKLDVQLPGPALKAQQQLIRLGHCNLLPESQITPMTRVQIARDITMAHTLSQAALPGKVVVLLAGSGHVDRHL GVPQHLPSNLSSKSIGLLAETLRNATEHIAKFDAIWPARPAPEKDYCAEFRMR
Specific function: Unknown
COG id: COG3016
COG function: function code S; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30745; Mature: 30745
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHVPLLALSALSGFPGALICVAAMALAGGCASRPGPPEAPILQPPSGSAAAATVARLDA CCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHH LLPIDALLIGEQHDAAEHQQIAQQVVARLAARGLLGALALEMADAGVSTAALQPSASEEQ HCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHH TRHALKWNDKAWPWTAYGPAVMTAVRAGVPVLGANLPRAQMQGSMDDSKLDVQLPGPALK HHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEECCCHHHH AQQQLIRLGHCNLLPESQITPMTRVQIARDITMAHTLSQAALPGKVVVLLAGSGHVDRHL HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHC GVPQHLPSNLSSKSIGLLAETLRNATEHIAKFDAIWPARPAPEKDYCAEFRMR CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MLHVPLLALSALSGFPGALICVAAMALAGGCASRPGPPEAPILQPPSGSAAAATVARLDA CCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHH LLPIDALLIGEQHDAAEHQQIAQQVVARLAARGLLGALALEMADAGVSTAALQPSASEEQ HCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHH TRHALKWNDKAWPWTAYGPAVMTAVRAGVPVLGANLPRAQMQGSMDDSKLDVQLPGPALK HHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEECCCHHHH AQQQLIRLGHCNLLPESQITPMTRVQIARDITMAHTLSQAALPGKVVVLLAGSGHVDRHL HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHC GVPQHLPSNLSSKSIGLLAETLRNATEHIAKFDAIWPARPAPEKDYCAEFRMR CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA