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The map label for this gene is yohK [H]

Identifier: 91786341

GI number: 91786341

Start: 447409

End: 448134

Strand: Reverse

Name: yohK [H]

Synonym: Bpro_0431

Alternate gene names: 91786341

Gene position: 448134-447409 (Counterclockwise)

Preceding gene: 91786342

Following gene: 91786338

Centisome position: 8.62

GC content: 68.32

Gene sequence:

>726_bases
ATGCCTAAGTTCGTGGAGCTGTGGGTCTACCTCTCGGCCTCGCCGCTGTTCGGACTGACTGCCACGCTGGTGGTGTATGT
GCTGGCCCAGGCAGCGTATGCGCGCCTGGGGCATGCCCCCTGGGCCAACCCGGTGTTGTGGACCATGGTGTGCATTGCCA
GCGGCCTGCTGCTGACTGACGTGCCCTACCCCAGCTATTTCGCCGGCGCGCAATTCATCCATTTCCTGCTGGGCCCGGCC
GTGGTGGCGCTGGCCTGGCCGCTTTGGCAGCGGCGCGAGGAACTGCGTCGACGCTGGTGGCGCCTGCTGCTCGCCGCACT
GGCAGGCGGGGCAGCTGCGAGCGGCTCGGCACTGCTGCTGGCGTGGGCTCTCGGCTTGCCGGCGGAAGTCGCGCTATCGC
TGGTGCCGAAGTCCGTGACCGCACCCGTCGCCATGGGGATCGCTGAAAAAATAGGCGGCATTCCGGCGCTCGCCGCCGTG
TTTGCCGTCATCACCGGCCTGGTGGGGGCGCTCGCCGGCAAGTACCTGTTCGACGCCTTGCGCATACCGGCAAACCAGGC
GGGATGGGCAGCACGCGGCTTCGCCCTGGGCACAGCGTCCCATGGGATTGGCGCGGCGCGCGCCCTGCAGGTCAACGCCG
ATGCCGGCGCTTATGCCGGCCTGGCGCTGGGCCTGCAAGTCGTGCTCGCTTCCCTGTTGATACCGCTGGCCTTTCGCTGG
TTCTAG

Upstream 100 bases:

>100_bases
GCAGTCATTGTGCTGTCCACGCTGGCCGGTCTGGCGGTGACTGTTTTGAGCCTGCACCTGCTGCAGGGCCGCCTCGACCC
CCTCGGGAAGGAGGACCCGC

Downstream 100 bases:

>100_bases
CGCTGGCTTTAGGTTTCCCGGGTAAGCTCTGCCGGAGTGGCCGGAACGCCTGGACCGCTAGACCGCCTGCAAACCAGGCT
TGACCATGGCCGCAGGCTTG

Product: LrgB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MPKFVELWVYLSASPLFGLTATLVVYVLAQAAYARLGHAPWANPVLWTMVCIASGLLLTDVPYPSYFAGAQFIHFLLGPA
VVALAWPLWQRREELRRRWWRLLLAALAGGAAASGSALLLAWALGLPAEVALSLVPKSVTAPVAMGIAEKIGGIPALAAV
FAVITGLVGALAGKYLFDALRIPANQAGWAARGFALGTASHGIGAARALQVNADAGAYAGLALGLQVVLASLLIPLAFRW
F

Sequences:

>Translated_241_residues
MPKFVELWVYLSASPLFGLTATLVVYVLAQAAYARLGHAPWANPVLWTMVCIASGLLLTDVPYPSYFAGAQFIHFLLGPA
VVALAWPLWQRREELRRRWWRLLLAALAGGAAASGSALLLAWALGLPAEVALSLVPKSVTAPVAMGIAEKIGGIPALAAV
FAVITGLVGALAGKYLFDALRIPANQAGWAARGFALGTASHGIGAARALQVNADAGAYAGLALGLQVVLASLLIPLAFRW
F
>Mature_240_residues
PKFVELWVYLSASPLFGLTATLVVYVLAQAAYARLGHAPWANPVLWTMVCIASGLLLTDVPYPSYFAGAQFIHFLLGPAV
VALAWPLWQRREELRRRWWRLLLAALAGGAAASGSALLLAWALGLPAEVALSLVPKSVTAPVAMGIAEKIGGIPALAAVF
AVITGLVGALAGKYLFDALRIPANQAGWAARGFALGTASHGIGAARALQVNADAGAYAGLALGLQVVLASLLIPLAFRWF

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=217, Percent_Identity=41.0138248847926, Blast_Score=157, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 25251; Mature: 25120

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKFVELWVYLSASPLFGLTATLVVYVLAQAAYARLGHAPWANPVLWTMVCIASGLLLTD
CCCHHEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEC
VPYPSYFAGAQFIHFLLGPAVVALAWPLWQRREELRRRWWRLLLAALAGGAAASGSALLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
AWALGLPAEVALSLVPKSVTAPVAMGIAEKIGGIPALAAVFAVITGLVGALAGKYLFDAL
HHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPANQAGWAARGFALGTASHGIGAARALQVNADAGAYAGLALGLQVVLASLLIPLAFRW
HCCCCCCCCHHHCCCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC
F
C
>Mature Secondary Structure 
PKFVELWVYLSASPLFGLTATLVVYVLAQAAYARLGHAPWANPVLWTMVCIASGLLLTD
CCHHEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEC
VPYPSYFAGAQFIHFLLGPAVVALAWPLWQRREELRRRWWRLLLAALAGGAAASGSALLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
AWALGLPAEVALSLVPKSVTAPVAMGIAEKIGGIPALAAVFAVITGLVGALAGKYLFDAL
HHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPANQAGWAARGFALGTASHGIGAARALQVNADAGAYAGLALGLQVVLASLLIPLAFRW
HCCCCCCCCHHHCCCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]