| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786319
Identifier: 91786319
GI number: 91786319
Start: 422608
End: 423051
Strand: Direct
Name: 91786319
Synonym: Bpro_0409
Alternate gene names: NA
Gene position: 422608-423051 (Clockwise)
Preceding gene: 91786318
Following gene: 91786320
Centisome position: 8.13
GC content: 60.36
Gene sequence:
>444_bases ATGCCCAACACCACCTGGATTTTGGTAGCCAACGCAAGCACCGCCAAAATCTATGCCAACCACGGCACCAAGAAAGGACT CAAGATTCTGAAGGAGACCGAACACCCGGAAAGCCGACAAAAAAGTGCCGATCTGGCCACCGACCGCCCCGGACACATGC CGGGCATTGGCAATGGCCACGGCGCCTGCCAGCCCCAGACCGACCCCAAGCGCAACGCCGCGCAGCATTTCGCCCAGGAG CTGGCGCGCGAGTTCAATCATGGCCGCAGCACCAACCAGTTCGGGCGCGCCATCCTCATCGCCCCGTCTTCTTTCATGGG CCTGCTCAACGACAAGCTGGACGGCCCCACCGCCAAGCTGGTCAGCGACCGCTTCGAAAAGGATTACACCAAGGCGAGCG AAAAGGAGCTCACCGGACATCTGGAGTCCTGCATCTATCTTTGA
Upstream 100 bases:
>100_bases ATGGGGTTGATTTGTCAGCCCGCTTGCATTCGGCGGCGCTGGCGACTAACGTAAGAGGGCAACATGACTGGTTGCCCGTT TACTTCAAAGGAGCATGCAT
Downstream 100 bases:
>100_bases CCGGCCCTAATCGACGCTCCCGGTATGCAGTGCGTACTCGGGGCGCCGGATTTTTCGCTGCGGGCGTGGTGACAGCCAAG GCGCTGGCGGCTAGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Host Cell Attachment-Required Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPNTTWILVANASTAKIYANHGTKKGLKILKETEHPESRQKSADLATDRPGHMPGIGNGHGACQPQTDPKRNAAQHFAQE LAREFNHGRSTNQFGRAILIAPSSFMGLLNDKLDGPTAKLVSDRFEKDYTKASEKELTGHLESCIYL
Sequences:
>Translated_147_residues MPNTTWILVANASTAKIYANHGTKKGLKILKETEHPESRQKSADLATDRPGHMPGIGNGHGACQPQTDPKRNAAQHFAQE LAREFNHGRSTNQFGRAILIAPSSFMGLLNDKLDGPTAKLVSDRFEKDYTKASEKELTGHLESCIYL >Mature_146_residues PNTTWILVANASTAKIYANHGTKKGLKILKETEHPESRQKSADLATDRPGHMPGIGNGHGACQPQTDPKRNAAQHFAQEL AREFNHGRSTNQFGRAILIAPSSFMGLLNDKLDGPTAKLVSDRFEKDYTKASEKELTGHLESCIYL
Specific function: Unknown
COG id: COG5622
COG function: function code N; Protein required for attachment to host cells
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16155; Mature: 16024
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTTWILVANASTAKIYANHGTKKGLKILKETEHPESRQKSADLATDRPGHMPGIGNGH CCCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC GACQPQTDPKRNAAQHFAQELAREFNHGRSTNQFGRAILIAPSSFMGLLNDKLDGPTAKL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCCCHHHH VSDRFEKDYTKASEKELTGHLESCIYL HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PNTTWILVANASTAKIYANHGTKKGLKILKETEHPESRQKSADLATDRPGHMPGIGNGH CCCEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC GACQPQTDPKRNAAQHFAQELAREFNHGRSTNQFGRAILIAPSSFMGLLNDKLDGPTAKL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCCCHHHH VSDRFEKDYTKASEKELTGHLESCIYL HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA