| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786318
Identifier: 91786318
GI number: 91786318
Start: 421908
End: 422393
Strand: Direct
Name: 91786318
Synonym: Bpro_0408
Alternate gene names: NA
Gene position: 421908-422393 (Clockwise)
Preceding gene: 91786316
Following gene: 91786319
Centisome position: 8.11
GC content: 57.61
Gene sequence:
>486_bases ATGCAACTCATCACTGTGAAAATCGACAAGCCGGAAGCGACCAACTTCATTCTGGGGCAGACCCACTTCATCAAGTCCGT CGAGGACCTCCACGAAGCGCTGGTGGGCGCCGTGCCGGGCATCAAGTTTGGCCTGGCCTTTTGCGAAGCTTCCGGCAAAT GCCTGGTGCGGTGGTCGGGTACCGACCCCGCCATGGTCGAACTTGCCCGGAATAACGCAAAGACTCTTGCTGCGGGCCAT TGCTTCATCATTTTCCTGGGGGAAGGCTTCTACCCGCTGAATGTGTTGAACACCGTCAAAATGGTGCCGGAGGTATGCCG CATTTTCTGCGCAACAGCCAATCCAACCGAAGTGATTCTTGCGGAGACGGAGCAGGGACGCGGCGTCCTGGGCGTGGTGG ACGGTTTTCCAACCAAAGGGGTCGAGGACGAGGACGACATCAGCTGGCGCAAGAATCTGTTGCGGCAGATCGGCTACAAG CTTTGA
Upstream 100 bases:
>100_bases CAGGGGGTTGAATTTTCCATGCGTTAGAGGTCTTGGCAGTCAGGTATGTTGTGCCGCCTCACCGCTCTGGCAAGTCAAGC CGGGAAAGAAGGAGTTCGAT
Downstream 100 bases:
>100_bases TTGAAGAGCCGGCGCGGCTGGAGGGGATCCGATAAATCATTGCCGGATTGCCGGATTGCCGGATTGCCGGATTGCCGGAT TGCCGGCTTCGGCGGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MQLITVKIDKPEATNFILGQTHFIKSVEDLHEALVGAVPGIKFGLAFCEASGKCLVRWSGTDPAMVELARNNAKTLAAGH CFIIFLGEGFYPLNVLNTVKMVPEVCRIFCATANPTEVILAETEQGRGVLGVVDGFPTKGVEDEDDISWRKNLLRQIGYK L
Sequences:
>Translated_161_residues MQLITVKIDKPEATNFILGQTHFIKSVEDLHEALVGAVPGIKFGLAFCEASGKCLVRWSGTDPAMVELARNNAKTLAAGH CFIIFLGEGFYPLNVLNTVKMVPEVCRIFCATANPTEVILAETEQGRGVLGVVDGFPTKGVEDEDDISWRKNLLRQIGYK L >Mature_161_residues MQLITVKIDKPEATNFILGQTHFIKSVEDLHEALVGAVPGIKFGLAFCEASGKCLVRWSGTDPAMVELARNNAKTLAAGH CFIIFLGEGFYPLNVLNTVKMVPEVCRIFCATANPTEVILAETEQGRGVLGVVDGFPTKGVEDEDDISWRKNLLRQIGYK L
Specific function: Unknown
COG id: COG1839
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17609; Mature: 17609
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLITVKIDKPEATNFILGQTHFIKSVEDLHEALVGAVPGIKFGLAFCEASGKCLVRWSG CEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCEEEEECC TDPAMVELARNNAKTLAAGHCFIIFLGEGFYPLNVLNTVKMVPEVCRIFCATANPTEVIL CCHHHHHHHHCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE AETEQGRGVLGVVDGFPTKGVEDEDDISWRKNLLRQIGYKL EECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MQLITVKIDKPEATNFILGQTHFIKSVEDLHEALVGAVPGIKFGLAFCEASGKCLVRWSG CEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCEEEEECC TDPAMVELARNNAKTLAAGHCFIIFLGEGFYPLNVLNTVKMVPEVCRIFCATANPTEVIL CCHHHHHHHHCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE AETEQGRGVLGVVDGFPTKGVEDEDDISWRKNLLRQIGYKL EECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA