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The map label for this gene is yraN [C]

Identifier: 91786301

GI number: 91786301

Start: 404221

End: 404670

Strand: Direct

Name: yraN [C]

Synonym: Bpro_0391

Alternate gene names: 91786301

Gene position: 404221-404670 (Clockwise)

Preceding gene: 91786298

Following gene: 91786302

Centisome position: 7.77

GC content: 66.44

Gene sequence:

>450_bases
ATGTGGTTTTCCAGAAAACAGGTTGTCAAGCCGCCGCCGGACGGTTCCCGGGCGCAGCCAGGGCAGGTTACCACCAAGTC
CCGGGGTGATGCTGCAGAGTCGGCCGCGCAGGTCTTTCTGGCGCGGGCCGGTTTGATTCCCGTGGAAAGCAATTATCGGA
CGCCGGGGCGCGGTGGAGGCGAGATTGACCTGGTGATGCGCACGCCCGACGGCACGCTGGTGTTCGTCGAGGTCCGCCAG
CGTTCGGGCGCCTCGCATGGAGGCGCCGCCGCCAGCATCAGCCCGGCCAAGCAGCAACGCATCATTTTTGCGGCACGCCA
CTACCTGATGCGCTTTGCCAGCCCCCCGCCTTGCCGCTTTGATGTGGTGCTGGTACACGGAGGGCCGGGGCAGGGCCCCG
TTGAGAATGGCCGCCTCGAGTGGCTGCCCGCAGCGTTCGATGCTTCCTGA

Upstream 100 bases:

>100_bases
CCAATCGGCGTGGCAACGACATACAGCATGGCTTCCGGATAATGCTGCATACCTGCTGCGGCGCGTGCCGCGGCGAGAGC
CAAGTCGAAAGAAGCGTTCA

Downstream 100 bases:

>100_bases
CGAGCGCTGGCGAGGACACCCGCTGCAGCGCAGCCCGGTGCGGCGTATTTTGTAACCAGGATTGTCTTTGCCGGCTCCCC
CGGCCGGATCCATGCCCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MWFSRKQVVKPPPDGSRAQPGQVTTKSRGDAAESAAQVFLARAGLIPVESNYRTPGRGGGEIDLVMRTPDGTLVFVEVRQ
RSGASHGGAAASISPAKQQRIIFAARHYLMRFASPPPCRFDVVLVHGGPGQGPVENGRLEWLPAAFDAS

Sequences:

>Translated_149_residues
MWFSRKQVVKPPPDGSRAQPGQVTTKSRGDAAESAAQVFLARAGLIPVESNYRTPGRGGGEIDLVMRTPDGTLVFVEVRQ
RSGASHGGAAASISPAKQQRIIFAARHYLMRFASPPPCRFDVVLVHGGPGQGPVENGRLEWLPAAFDAS
>Mature_149_residues
MWFSRKQVVKPPPDGSRAQPGQVTTKSRGDAAESAAQVFLARAGLIPVESNYRTPGRGGGEIDLVMRTPDGTLVFVEVRQ
RSGASHGGAAASISPAKQQRIIFAARHYLMRFASPPPCRFDVVLVHGGPGQGPVENGRLEWLPAAFDAS

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=140, Percent_Identity=40, Blast_Score=84, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y391_POLSJ (Q12GI7)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_547253.1
- STRING:   Q12GI7
- GeneID:   4011570
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_0391
- NMPDR:   fig|296591.1.peg.4394
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   RNYRTPG
- PhylomeDB:   Q12GI7
- ProtClustDB:   PRK14673
- BioCyc:   PSP296591:BPRO_0391-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 15905; Mature: 15905

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFSRKQVVKPPPDGSRAQPGQVTTKSRGDAAESAAQVFLARAGLIPVESNYRTPGRGGG
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCC
EIDLVMRTPDGTLVFVEVRQRSGASHGGAAASISPAKQQRIIFAARHYLMRFASPPPCRF
EEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE
DVVLVHGGPGQGPVENGRLEWLPAAFDAS
EEEEEECCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MWFSRKQVVKPPPDGSRAQPGQVTTKSRGDAAESAAQVFLARAGLIPVESNYRTPGRGGG
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCC
EIDLVMRTPDGTLVFVEVRQRSGASHGGAAASISPAKQQRIIFAARHYLMRFASPPPCRF
EEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE
DVVLVHGGPGQGPVENGRLEWLPAAFDAS
EEEEEECCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA