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The map label for this gene is amaB [H]

Identifier: 91786289

GI number: 91786289

Start: 391055

End: 392302

Strand: Reverse

Name: amaB [H]

Synonym: Bpro_0379

Alternate gene names: 91786289

Gene position: 392302-391055 (Counterclockwise)

Preceding gene: 91786296

Following gene: 91786285

Centisome position: 7.54

GC content: 64.82

Gene sequence:

>1248_bases
ATGGATACAGGCGTCACCCCCCGAATCGATGCAACCCGGCTGTGGCAGTCGCTCATGGACCTGGCCCAGATTGGTGCAAC
GCCCAAAGGTGGTGTGCGGCGCCTTGCCCTGACCGATGAAGACCGGCAAGGCCGCGACCTGGTCGCTCGCTGGTGCCGCG
AGGCCGGACTGGAAGTGCGCATCGACGAAGTGGGCAACATGTTTGCCCGTCGCGCTGGACGGGACCCGCAAGCGCGGGCC
GTTGCCACGGGCAGTCATATCGACACCCAGCCATCCGGCGGCAAGTTCGACGGCAACTATGGTGTGCTGGCCGGCCTGGA
GGTGATGCGCACGCTCGACGATTTGGGTATTGAGACCCGCGCGCCACTCGAAGTGGTGGTGTGGACCAACGAGGAAGGCT
CACGTTTCACGCCGGTCATGATGGGTTCTGGTGCATTTGCCGGCCTATTCAATCCTGATTTTGTGCATACCCAGAAAGAC
AGGGCGGGCATCTCCGTCGGCGACGAGTTGCAACGCATCGGTTACCGCGGCACCCAGCCCTGCGGCGCCGTGCCGGGGGG
CATGTTTGCCGCTTACTTTGAGGCGCACATTGAGCAGGGGCCAGTGCTGGAGGCGCAGGGACTGCCCATCGGCATCGTGA
GCGGCGCCCTGGGGCAGCAGTGGTATGACGTGACGGTGACGGGTATGGATGCCCATGCCGGTCCCACCCCGATGGAACTG
CGCCGTGATGCCATGCTGGCTGCGGCACGCATGGTGGAAGCAGTCAATCGCATTGCGCTCGACGAGGCACCGCATGGGCG
CGGCACCGTGGGGTTTGTGCAGGTGCAGCCGAACTCCCGCAACGTGATCCCCGGGTGCGTCCAGTTTTCGGTCGATTTCC
GCAATCCCTCGCAGGGCGGGCTTGACCGCATGGATGCCGCGATGCACGCGCAATTCACACGCATTGCCGGCGATGGCAAG
GTGGCCGTGGAAATTCGCCAGGTGGTGAAGTTTGAGCCCTGCCTGTTTGACAGCGCTTGCGTTGCGAGCGTGCGCCGCGC
GGCGCAAGCGCTGGGGCTACCGCATATGGACGTGGTCAGCGGCGCCGGGCACGACGCCGTCTATGTCGCTGGCGTGGCAC
CTGCCGGCATGATCTTTGTGCCCTGCAAAGACGGCATCAGCCACAACGAAATCGAGGACGCCCTGCCCGAACACATTGCC
GCCGGGGCCAACGTGTTGCTGCTGGCCATGCTGGAGCGGGCGCAGTGA

Upstream 100 bases:

>100_bases
TTTACCGTTGACTCTGGCTTGTTAATTGCTAACTTTGTGACTGATCGCAGCACCCCCTTTTCTCCTACGCTTCTACGCAC
TTCTTCTTTATAGGAACCTC

Downstream 100 bases:

>100_bases
AGGGAAATCGAGAGCGTTGACTGGAGAGCGCGGCGTCCGCTGTTTAATGCGCGATGGACTGCGAGATAGCCCGTGCGCAC
TCGATCACCATGGGCGACAA

Product: amidase, hydantoinase/carbamoylase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MDTGVTPRIDATRLWQSLMDLAQIGATPKGGVRRLALTDEDRQGRDLVARWCREAGLEVRIDEVGNMFARRAGRDPQARA
VATGSHIDTQPSGGKFDGNYGVLAGLEVMRTLDDLGIETRAPLEVVVWTNEEGSRFTPVMMGSGAFAGLFNPDFVHTQKD
RAGISVGDELQRIGYRGTQPCGAVPGGMFAAYFEAHIEQGPVLEAQGLPIGIVSGALGQQWYDVTVTGMDAHAGPTPMEL
RRDAMLAAARMVEAVNRIALDEAPHGRGTVGFVQVQPNSRNVIPGCVQFSVDFRNPSQGGLDRMDAAMHAQFTRIAGDGK
VAVEIRQVVKFEPCLFDSACVASVRRAAQALGLPHMDVVSGAGHDAVYVAGVAPAGMIFVPCKDGISHNEIEDALPEHIA
AGANVLLLAMLERAQ

Sequences:

>Translated_415_residues
MDTGVTPRIDATRLWQSLMDLAQIGATPKGGVRRLALTDEDRQGRDLVARWCREAGLEVRIDEVGNMFARRAGRDPQARA
VATGSHIDTQPSGGKFDGNYGVLAGLEVMRTLDDLGIETRAPLEVVVWTNEEGSRFTPVMMGSGAFAGLFNPDFVHTQKD
RAGISVGDELQRIGYRGTQPCGAVPGGMFAAYFEAHIEQGPVLEAQGLPIGIVSGALGQQWYDVTVTGMDAHAGPTPMEL
RRDAMLAAARMVEAVNRIALDEAPHGRGTVGFVQVQPNSRNVIPGCVQFSVDFRNPSQGGLDRMDAAMHAQFTRIAGDGK
VAVEIRQVVKFEPCLFDSACVASVRRAAQALGLPHMDVVSGAGHDAVYVAGVAPAGMIFVPCKDGISHNEIEDALPEHIA
AGANVLLLAMLERAQ
>Mature_415_residues
MDTGVTPRIDATRLWQSLMDLAQIGATPKGGVRRLALTDEDRQGRDLVARWCREAGLEVRIDEVGNMFARRAGRDPQARA
VATGSHIDTQPSGGKFDGNYGVLAGLEVMRTLDDLGIETRAPLEVVVWTNEEGSRFTPVMMGSGAFAGLFNPDFVHTQKD
RAGISVGDELQRIGYRGTQPCGAVPGGMFAAYFEAHIEQGPVLEAQGLPIGIVSGALGQQWYDVTVTGMDAHAGPTPMEL
RRDAMLAAARMVEAVNRIALDEAPHGRGTVGFVQVQPNSRNVIPGCVQFSVDFRNPSQGGLDRMDAAMHAQFTRIAGDGK
VAVEIRQVVKFEPCLFDSACVASVRRAAQALGLPHMDVVSGAGHDAVYVAGVAPAGMIFVPCKDGISHNEIEDALPEHIA
AGANVLLLAMLERAQ

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=403, Percent_Identity=35.2357320099256, Blast_Score=208, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44304; Mature: 44304

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTGVTPRIDATRLWQSLMDLAQIGATPKGGVRRLALTDEDRQGRDLVARWCREAGLEVR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEE
IDEVGNMFARRAGRDPQARAVATGSHIDTQPSGGKFDGNYGVLAGLEVMRTLDDLGIETR
EHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
APLEVVVWTNEEGSRFTPVMMGSGAFAGLFNPDFVHTQKDRAGISVGDELQRIGYRGTQP
CCEEEEEEECCCCCEECCEEECCCCEECCCCCCCEECCCCCCCCCCCHHHHHCCCCCCCC
CGAVPGGMFAAYFEAHIEQGPVLEAQGLPIGIVSGALGQQWYDVTVTGMDAHAGPTPMEL
CCCCCCHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCCEEEEEEEECCCCCCCCHHHH
RRDAMLAAARMVEAVNRIALDEAPHGRGTVGFVQVQPNSRNVIPGCVQFSVDFRNPSQGG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCC
LDRMDAAMHAQFTRIAGDGKVAVEIRQVVKFEPCLFDSACVASVRRAAQALGLPHMDVVS
HHHHHHHHHHHHHEECCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHC
GAGHDAVYVAGVAPAGMIFVPCKDGISHNEIEDALPEHIAAGANVLLLAMLERAQ
CCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDTGVTPRIDATRLWQSLMDLAQIGATPKGGVRRLALTDEDRQGRDLVARWCREAGLEVR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEE
IDEVGNMFARRAGRDPQARAVATGSHIDTQPSGGKFDGNYGVLAGLEVMRTLDDLGIETR
EHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
APLEVVVWTNEEGSRFTPVMMGSGAFAGLFNPDFVHTQKDRAGISVGDELQRIGYRGTQP
CCEEEEEEECCCCCEECCEEECCCCEECCCCCCCEECCCCCCCCCCCHHHHHCCCCCCCC
CGAVPGGMFAAYFEAHIEQGPVLEAQGLPIGIVSGALGQQWYDVTVTGMDAHAGPTPMEL
CCCCCCHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCCEEEEEEEECCCCCCCCHHHH
RRDAMLAAARMVEAVNRIALDEAPHGRGTVGFVQVQPNSRNVIPGCVQFSVDFRNPSQGG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCC
LDRMDAAMHAQFTRIAGDGKVAVEIRQVVKFEPCLFDSACVASVRRAAQALGLPHMDVVS
HHHHHHHHHHHHHEECCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHC
GAGHDAVYVAGVAPAGMIFVPCKDGISHNEIEDALPEHIAAGANVLLLAMLERAQ
CCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]