| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is allA [H]
Identifier: 91786296
GI number: 91786296
Start: 399637
End: 400269
Strand: Reverse
Name: allA [H]
Synonym: Bpro_0386
Alternate gene names: 91786296
Gene position: 400269-399637 (Counterclockwise)
Preceding gene: 91786297
Following gene: 91786289
Centisome position: 7.7
GC content: 63.82
Gene sequence:
>633_bases ATGTACCCTGCATGCTGCCAAATCATGCAAATCACGAACACATCCCAATCTGGCCAGAACCCGGCTGCCGCCCGGCCCAC CCTCCAGCCCCAGTTACTTACCGCCGGGGGTTTCGCGCCTTTCGGTACCGTGGTGGAGCCCTTTGCGCCGCCAGGCTCGC CTGACGCCTTGCCGCCGCAGGGTGCACGCGCCATCAACAGCGGTACAACCTGGCGGCTGGATGTGGTGCACGACCTTGGA TTGAACCATGAAGGCGGAACGCCGGGCCTGGCCGTCTACAGTGCCTCCGCGCGCCAATTTCCCATAAGACTGGAAGTACT GGAACGCCATCAACTGGGCAGCCAGAGCTTCTTGCCACTCACGGGCGCGCGCTTCATCGTGGTGGTGGCTGCGGCAGGCC CCGCGCCGGACGCCGCGCAACTCAAGGCCTTCTACACGACCGGACGTCAGGGCGTGGTGCTGCACCGGGGCACGTGGCAC CACGCGCTGCTGGCGGTGGAGCCCGGAAGCTTTGCGGTGATAGAGCGTCACCAGTCATCACACGAAAGCGCTGTTGACTG CGAAGTCGCTGCGCTGCCCTCGTCTGTATGGCTTGAGCTGCCAGGCGCCCAAGACGGAACAATTAAAGATTGA
Upstream 100 bases:
>100_bases AACCCATCAAACTTTCCATAAGCGACGACACCGTGCGGGCTGTCGTGAGTTACGGAATCATCAATAGCAGCCAGATACTG GCTCCTGCGCCGGTTTTGGC
Downstream 100 bases:
>100_bases CACCCTCAGGAAGAGGCGATGCGCACCGCCAGTGCCAGCAATGAGCGATCACGGCCAGCCGGGCCCAACAGCGACAGGCC CAGGGGCGCGCCTTCATGCC
Product: ureidoglycolate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MYPACCQIMQITNTSQSGQNPAAARPTLQPQLLTAGGFAPFGTVVEPFAPPGSPDALPPQGARAINSGTTWRLDVVHDLG LNHEGGTPGLAVYSASARQFPIRLEVLERHQLGSQSFLPLTGARFIVVVAAAGPAPDAAQLKAFYTTGRQGVVLHRGTWH HALLAVEPGSFAVIERHQSSHESAVDCEVAALPSSVWLELPGAQDGTIKD
Sequences:
>Translated_210_residues MYPACCQIMQITNTSQSGQNPAAARPTLQPQLLTAGGFAPFGTVVEPFAPPGSPDALPPQGARAINSGTTWRLDVVHDLG LNHEGGTPGLAVYSASARQFPIRLEVLERHQLGSQSFLPLTGARFIVVVAAAGPAPDAAQLKAFYTTGRQGVVLHRGTWH HALLAVEPGSFAVIERHQSSHESAVDCEVAALPSSVWLELPGAQDGTIKD >Mature_210_residues MYPACCQIMQITNTSQSGQNPAAARPTLQPQLLTAGGFAPFGTVVEPFAPPGSPDALPPQGARAINSGTTWRLDVVHDLG LNHEGGTPGLAVYSASARQFPIRLEVLERHQLGSQSFLPLTGARFIVVVAAAGPAPDAAQLKAFYTTGRQGVVLHRGTWH HALLAVEPGSFAVIERHQSSHESAVDCEVAALPSSVWLELPGAQDGTIKD
Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]
COG id: COG3194
COG function: function code F; Ureidoglycolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureidoglycolate hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786714, Length=170, Percent_Identity=33.5294117647059, Blast_Score=86, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR007247 [H]
Pfam domain/function: PF04115 Ureidogly_hydro [H]
EC number: =3.5.3.19 [H]
Molecular weight: Translated: 22100; Mature: 22100
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPACCQIMQITNTSQSGQNPAAARPTLQPQLLTAGGFAPFGTVVEPFAPPGSPDALPPQ CCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCC GARAINSGTTWRLDVVHDLGLNHEGGTPGLAVYSASARQFPIRLEVLERHQLGSQSFLPL CCEEECCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHCCCCCCCEE TGARFIVVVAAAGPAPDAAQLKAFYTTGRQGVVLHRGTWHHALLAVEPGSFAVIERHQSS CCCEEEEEEEECCCCCCHHHEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEECCCCC HESAVDCEVAALPSSVWLELPGAQDGTIKD CCCCCEEEEEECCCEEEEECCCCCCCCCCC >Mature Secondary Structure MYPACCQIMQITNTSQSGQNPAAARPTLQPQLLTAGGFAPFGTVVEPFAPPGSPDALPPQ CCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCC GARAINSGTTWRLDVVHDLGLNHEGGTPGLAVYSASARQFPIRLEVLERHQLGSQSFLPL CCEEECCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHCCCCCCCEE TGARFIVVVAAAGPAPDAAQLKAFYTTGRQGVVLHRGTWHHALLAVEPGSFAVIERHQSS CCCEEEEEEEECCCCCCHHHEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEECCCCC HESAVDCEVAALPSSVWLELPGAQDGTIKD CCCCCEEEEEECCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA