Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is allA [H]

Identifier: 91786296

GI number: 91786296

Start: 399637

End: 400269

Strand: Reverse

Name: allA [H]

Synonym: Bpro_0386

Alternate gene names: 91786296

Gene position: 400269-399637 (Counterclockwise)

Preceding gene: 91786297

Following gene: 91786289

Centisome position: 7.7

GC content: 63.82

Gene sequence:

>633_bases
ATGTACCCTGCATGCTGCCAAATCATGCAAATCACGAACACATCCCAATCTGGCCAGAACCCGGCTGCCGCCCGGCCCAC
CCTCCAGCCCCAGTTACTTACCGCCGGGGGTTTCGCGCCTTTCGGTACCGTGGTGGAGCCCTTTGCGCCGCCAGGCTCGC
CTGACGCCTTGCCGCCGCAGGGTGCACGCGCCATCAACAGCGGTACAACCTGGCGGCTGGATGTGGTGCACGACCTTGGA
TTGAACCATGAAGGCGGAACGCCGGGCCTGGCCGTCTACAGTGCCTCCGCGCGCCAATTTCCCATAAGACTGGAAGTACT
GGAACGCCATCAACTGGGCAGCCAGAGCTTCTTGCCACTCACGGGCGCGCGCTTCATCGTGGTGGTGGCTGCGGCAGGCC
CCGCGCCGGACGCCGCGCAACTCAAGGCCTTCTACACGACCGGACGTCAGGGCGTGGTGCTGCACCGGGGCACGTGGCAC
CACGCGCTGCTGGCGGTGGAGCCCGGAAGCTTTGCGGTGATAGAGCGTCACCAGTCATCACACGAAAGCGCTGTTGACTG
CGAAGTCGCTGCGCTGCCCTCGTCTGTATGGCTTGAGCTGCCAGGCGCCCAAGACGGAACAATTAAAGATTGA

Upstream 100 bases:

>100_bases
AACCCATCAAACTTTCCATAAGCGACGACACCGTGCGGGCTGTCGTGAGTTACGGAATCATCAATAGCAGCCAGATACTG
GCTCCTGCGCCGGTTTTGGC

Downstream 100 bases:

>100_bases
CACCCTCAGGAAGAGGCGATGCGCACCGCCAGTGCCAGCAATGAGCGATCACGGCCAGCCGGGCCCAACAGCGACAGGCC
CAGGGGCGCGCCTTCATGCC

Product: ureidoglycolate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MYPACCQIMQITNTSQSGQNPAAARPTLQPQLLTAGGFAPFGTVVEPFAPPGSPDALPPQGARAINSGTTWRLDVVHDLG
LNHEGGTPGLAVYSASARQFPIRLEVLERHQLGSQSFLPLTGARFIVVVAAAGPAPDAAQLKAFYTTGRQGVVLHRGTWH
HALLAVEPGSFAVIERHQSSHESAVDCEVAALPSSVWLELPGAQDGTIKD

Sequences:

>Translated_210_residues
MYPACCQIMQITNTSQSGQNPAAARPTLQPQLLTAGGFAPFGTVVEPFAPPGSPDALPPQGARAINSGTTWRLDVVHDLG
LNHEGGTPGLAVYSASARQFPIRLEVLERHQLGSQSFLPLTGARFIVVVAAAGPAPDAAQLKAFYTTGRQGVVLHRGTWH
HALLAVEPGSFAVIERHQSSHESAVDCEVAALPSSVWLELPGAQDGTIKD
>Mature_210_residues
MYPACCQIMQITNTSQSGQNPAAARPTLQPQLLTAGGFAPFGTVVEPFAPPGSPDALPPQGARAINSGTTWRLDVVHDLG
LNHEGGTPGLAVYSASARQFPIRLEVLERHQLGSQSFLPLTGARFIVVVAAAGPAPDAAQLKAFYTTGRQGVVLHRGTWH
HALLAVEPGSFAVIERHQSSHESAVDCEVAALPSSVWLELPGAQDGTIKD

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]

COG id: COG3194

COG function: function code F; Ureidoglycolate hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureidoglycolate hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1786714, Length=170, Percent_Identity=33.5294117647059, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR007247 [H]

Pfam domain/function: PF04115 Ureidogly_hydro [H]

EC number: =3.5.3.19 [H]

Molecular weight: Translated: 22100; Mature: 22100

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPACCQIMQITNTSQSGQNPAAARPTLQPQLLTAGGFAPFGTVVEPFAPPGSPDALPPQ
CCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCC
GARAINSGTTWRLDVVHDLGLNHEGGTPGLAVYSASARQFPIRLEVLERHQLGSQSFLPL
CCEEECCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHCCCCCCCEE
TGARFIVVVAAAGPAPDAAQLKAFYTTGRQGVVLHRGTWHHALLAVEPGSFAVIERHQSS
CCCEEEEEEEECCCCCCHHHEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEECCCCC
HESAVDCEVAALPSSVWLELPGAQDGTIKD
CCCCCEEEEEECCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MYPACCQIMQITNTSQSGQNPAAARPTLQPQLLTAGGFAPFGTVVEPFAPPGSPDALPPQ
CCHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCCCCC
GARAINSGTTWRLDVVHDLGLNHEGGTPGLAVYSASARQFPIRLEVLERHQLGSQSFLPL
CCEEECCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHCCCCCCCEE
TGARFIVVVAAAGPAPDAAQLKAFYTTGRQGVVLHRGTWHHALLAVEPGSFAVIERHQSS
CCCEEEEEEEECCCCCCHHHEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEECCCCC
HESAVDCEVAALPSSVWLELPGAQDGTIKD
CCCCCEEEEEECCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA