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The map label for this gene is atpH

Identifier: 91786235

GI number: 91786235

Start: 346032

End: 346562

Strand: Direct

Name: atpH

Synonym: Bpro_0324

Alternate gene names: 91786235

Gene position: 346032-346562 (Clockwise)

Preceding gene: 91786234

Following gene: 91786236

Centisome position: 6.65

GC content: 61.58

Gene sequence:

>531_bases
ATGGCCGAACTAGCCACCATTGCCCGTCCCTACGCTGAAGCGCTGTTCAAGGCCTCCGGGTCTGATCTGGGCGCCGCCGC
TGCCTGGCTCGATGAACTGGCGGCCATTGCCGCCAACGTGCAACTGCAGCAGTTTGCCGGCAATCCCGGCGTCACGGTGA
CCCAGACTTTTGACGTGATCTCCGGCGTTGCCAAAAGCCAGCTGCCGGACGCCGCGAAGAATTTCCTGCGCACCGTCATC
GAGAACGGCCGCATCAGCGTCCTGCCGGAAATTGCCGCCCAGTTCCGCGTGCTGAAAAATGCGCAGAGCGGTTCCTCCGA
TGCCACCGTATACAGCGCATTTCCGCTGGAAGGTCCGGCATTGGCTGATCTGGCTGCAACGCTGGAAAAGCGCTTCGGCC
GCAAGCTCAACTTCGCGGTGGAGCTGGAGCCGGCCCTGATTGGCGGCGTACGTGTCGTGGTGGGTGACGAGGTGCTGGAC
ACCTCGGTGAAAGCCCGTTTAGAGCAAATGAAAGTGGCGCTGATTTCTTGA

Upstream 100 bases:

>100_bases
CGTCAAGGGTGCCGAGCAGATTCTGCGCAAGGAAGTCAATGCCGGCGTGCATGCTGACTTGCTGGGCCGCCTGAAGACCG
AACTTTAAGCGAGCGTATAC

Downstream 100 bases:

>100_bases
GCCGGCGCCTTCGCGCATCTCCCAAGTCTTTAGCCAACAACCTAGAAAGAAGGAAAGAGTCATGCAACTCAATCCCGCAG
AAATTTCTGAACTGATCAAG

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MAELATIARPYAEALFKASGSDLGAAAAWLDELAAIAANVQLQQFAGNPGVTVTQTFDVISGVAKSQLPDAAKNFLRTVI
ENGRISVLPEIAAQFRVLKNAQSGSSDATVYSAFPLEGPALADLAATLEKRFGRKLNFAVELEPALIGGVRVVVGDEVLD
TSVKARLEQMKVALIS

Sequences:

>Translated_176_residues
MAELATIARPYAEALFKASGSDLGAAAAWLDELAAIAANVQLQQFAGNPGVTVTQTFDVISGVAKSQLPDAAKNFLRTVI
ENGRISVLPEIAAQFRVLKNAQSGSSDATVYSAFPLEGPALADLAATLEKRFGRKLNFAVELEPALIGGVRVVVGDEVLD
TSVKARLEQMKVALIS
>Mature_175_residues
AELATIARPYAEALFKASGSDLGAAAAWLDELAAIAANVQLQQFAGNPGVTVTQTFDVISGVAKSQLPDAAKNFLRTVIE
NGRISVLPEIAAQFRVLKNAQSGSSDATVYSAFPLEGPALADLAATLEKRFGRKLNFAVELEPALIGGVRVVVGDEVLDT
SVKARLEQMKVALIS

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=175, Percent_Identity=31.4285714285714, Blast_Score=92, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6320504, Length=173, Percent_Identity=26.5895953757225, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_POLSJ (Q12GQ3)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_547187.1
- ProteinModelPortal:   Q12GQ3
- SMR:   Q12GQ3
- STRING:   Q12GQ3
- GeneID:   4011656
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_0324
- NMPDR:   fig|296591.1.peg.3514
- eggNOG:   COG0712
- HOGENOM:   HBG668108
- OMA:   ASLERKF
- PhylomeDB:   Q12GQ3
- ProtClustDB:   PRK05758
- BioCyc:   PSP296591:BPRO_0324-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 18484; Mature: 18353

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELATIARPYAEALFKASGSDLGAAAAWLDELAAIAANVQLQQFAGNPGVTVTQTFDVI
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHEECCCCCCCEEEHHHHHH
SGVAKSQLPDAAKNFLRTVIENGRISVLPEIAAQFRVLKNAQSGSSDATVYSAFPLEGPA
HHHHHHCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCH
LADLAATLEKRFGRKLNFAVELEPALIGGVRVVVGDEVLDTSVKARLEQMKVALIS
HHHHHHHHHHHCCCCCCEEEEECHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AELATIARPYAEALFKASGSDLGAAAAWLDELAAIAANVQLQQFAGNPGVTVTQTFDVI
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHEECCCCCCCEEEHHHHHH
SGVAKSQLPDAAKNFLRTVIENGRISVLPEIAAQFRVLKNAQSGSSDATVYSAFPLEGPA
HHHHHHCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCH
LADLAATLEKRFGRKLNFAVELEPALIGGVRVVVGDEVLDTSVKARLEQMKVALIS
HHHHHHHHHHHCCCCCCEEEEECHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA