| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is ysgA [C]
Identifier: 91786152
GI number: 91786152
Start: 263826
End: 264515
Strand: Direct
Name: ysgA [C]
Synonym: Bpro_0241
Alternate gene names: 91786152
Gene position: 263826-264515 (Clockwise)
Preceding gene: 91786151
Following gene: 91786153
Centisome position: 5.07
GC content: 67.25
Gene sequence:
>690_bases ATGGGTCAATTCATCGAACTCAAGTCTGCCGACGGTTTCGCCGTCCCGGCGTACGTGGCACAACCAGACGGCAAGCCCCG CGCTGCCGTCGTGGTGTTGCAGGAAATTTTCGGCGTCAACTCGCACATCCGGGCCGTCGCCGACCGCTTTGCGGCCGAGG GCTACCTGGCGGTGGCGCCGGCCACCTTTGCGCGCGTCAAGCCCGGCGTGGATCTGGGCTACACCGAGGCCGACATGGCG GCCGGTTTCGAGCTGAAAACCGCCGTGGCCGCGTTGCCGGGCGCCGGTGTGCTGCCCGACATTCAGGCCGCGATTGACCA TGCGGCCCAGGCCAGCGGCGGCAAGGTCGGCATCGTCGGGTTTTGCTGGGGCGGCCTGCTGACCTGGCATGCCGCCTGCA TGCTCAAGGGCCTGAGCGCGGCCGTCGCCTATTACGGCGGCGGCATCACGGCCGAGGACGAAATTGCGCGTCAGCCGCTG TGCCCGGTCATGGCGCACTTCGGTGACCAGGACCACTGGATCCCGATGGAAGGCATTGCAGCGTTCACCAAGGCGCACCC GGAGGTGGAAGTGCATGTGTACGCGGCCAACCACGGCTTCAATTGCGACCAGCGCGGCTCCTACAACGAAGCGGCGGCCA AGCTGGCGCGCGAGCGGTCGCTGGCCTTTTTTGCTGCCAGGCTGGCCTGA
Upstream 100 bases:
>100_bases GGGTAGGGCTGAGCGGTCCCCTGCAGCCTTGCCCTTCCATTTCCTGATTCCAGTTTTCAGTCCCGGCATCGCCGGTTTCC AACAGAGGAGTAAGCATCTC
Downstream 100 bases:
>100_bases CGGCCCCATGCCGACGACGGCGGGTTTCAGGCCGATGTGGCTTGCAGCCCATGTGGGACGGGTGTGTGCAGCGATCGCCT TGATGGCGCTCGGTGCCCCC
Product: carboxymethylenebutenolidase
Products: NA
Alternate protein names: Dienelactone hydrolase; DLH [H]
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MGQFIELKSADGFAVPAYVAQPDGKPRAAVVVLQEIFGVNSHIRAVADRFAAEGYLAVAPATFARVKPGVDLGYTEADMA AGFELKTAVAALPGAGVLPDIQAAIDHAAQASGGKVGIVGFCWGGLLTWHAACMLKGLSAAVAYYGGGITAEDEIARQPL CPVMAHFGDQDHWIPMEGIAAFTKAHPEVEVHVYAANHGFNCDQRGSYNEAAAKLARERSLAFFAARLA
Sequences:
>Translated_229_residues MGQFIELKSADGFAVPAYVAQPDGKPRAAVVVLQEIFGVNSHIRAVADRFAAEGYLAVAPATFARVKPGVDLGYTEADMA AGFELKTAVAALPGAGVLPDIQAAIDHAAQASGGKVGIVGFCWGGLLTWHAACMLKGLSAAVAYYGGGITAEDEIARQPL CPVMAHFGDQDHWIPMEGIAAFTKAHPEVEVHVYAANHGFNCDQRGSYNEAAAKLARERSLAFFAARLA >Mature_228_residues GQFIELKSADGFAVPAYVAQPDGKPRAAVVVLQEIFGVNSHIRAVADRFAAEGYLAVAPATFARVKPGVDLGYTEADMAA GFELKTAVAALPGAGVLPDIQAAIDHAAQASGGKVGIVGFCWGGLLTWHAACMLKGLSAAVAYYGGGITAEDEIARQPLC PVMAHFGDQDHWIPMEGIAAFTKAHPEVEVHVYAANHGFNCDQRGSYNEAAAKLARERSLAFFAARLA
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dienelactone hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI48994982, Length=234, Percent_Identity=37.1794871794872, Blast_Score=118, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: =3.1.1.45 [H]
Molecular weight: Translated: 23999; Mature: 23867
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQFIELKSADGFAVPAYVAQPDGKPRAAVVVLQEIFGVNSHIRAVADRFAAEGYLAVAP CCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECC ATFARVKPGVDLGYTEADMAAGFELKTAVAALPGAGVLPDIQAAIDHAAQASGGKVGIVG HHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEHH FCWGGLLTWHAACMLKGLSAAVAYYGGGITAEDEIARQPLCPVMAHFGDQDHWIPMEGIA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCCCCEECHHHHH AFTKAHPEVEVHVYAANHGFNCDQRGSYNEAAAKLARERSLAFFAARLA HHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GQFIELKSADGFAVPAYVAQPDGKPRAAVVVLQEIFGVNSHIRAVADRFAAEGYLAVAP CCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECC ATFARVKPGVDLGYTEADMAAGFELKTAVAALPGAGVLPDIQAAIDHAAQASGGKVGIVG HHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEHH FCWGGLLTWHAACMLKGLSAAVAYYGGGITAEDEIARQPLCPVMAHFGDQDHWIPMEGIA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCCCCEECHHHHH AFTKAHPEVEVHVYAANHGFNCDQRGSYNEAAAKLARERSLAFFAARLA HHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]