Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is nahD [H]

Identifier: 91786151

GI number: 91786151

Start: 263126

End: 263731

Strand: Direct

Name: nahD [H]

Synonym: Bpro_0240

Alternate gene names: 91786151

Gene position: 263126-263731 (Clockwise)

Preceding gene: 91786146

Following gene: 91786152

Centisome position: 5.06

GC content: 65.84

Gene sequence:

>606_bases
TTGAGCATTTCAGTGGACTATTACTTTTCGGTGCAGAGCCCGTGGACCTATCTGGGCCATGAGCGCTTTGCACAGTTGGC
GCGTGCCAGCGGCGCTGCCTTGCGCGTGATGCCGGTGGACCTGGGCGGCAAGGTTTTTCCCGTTTCGGGCGGGCTGCCGC
TGGGCCAGCGCGCCCCGCAGCGGCAGGCCTACCGGCTGCTCGAATTGCGGCGCTTCTCGGACCACCTGGGCATGCCGCTG
AACCTCAAGCCCAGGTACTTTCCGGTGGCCGGGGACGATGCCTCGCGCCTCATCATCGCGGTGGATCTGCATGACGGCAG
CGACGCGGCCATGAAAATAGGCGGCGCAATCTTCACCGCGGTGTGGGTGCGCGAGCGCAACATCGCCGATGCGCAAGTGC
TGGCCGAACTGCTTGCCGAATGCGGTTTGAGTGCCGGGCGCCTGGAGCAGTCCCGCGACCCGGCCGTGCAGGCGCATTAC
GAGGCCAATACGCGGCGGGCCATTGACGCCGGCGTGTTCGGCGCGCCCAGCTACGTGGTTGACGGAGAGCTGTTCTGGGG
TCAGGATAGGCTCGATTTCGTGGAGCGCAAGCTCAGGGCAGGGTAG

Upstream 100 bases:

>100_bases
TCCTGCAAAAATGGGCAATCCCGTGTACAAACCGGGCTTGAAGCCGATCAATGTACTTCAATTGGTGCCGGATGGCGCGC
ACTTTCAACCGGAGACTGTC

Downstream 100 bases:

>100_bases
GGCTGAGCGGTCCCCTGCAGCCTTGCCCTTCCATTTCCTGATTCCAGTTTTCAGTCCCGGCATCGCCGGTTTCCAACAGA
GGAGTAAGCATCTCATGGGT

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: HCCA isomerase [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSISVDYYFSVQSPWTYLGHERFAQLARASGAALRVMPVDLGGKVFPVSGGLPLGQRAPQRQAYRLLELRRFSDHLGMPL
NLKPRYFPVAGDDASRLIIAVDLHDGSDAAMKIGGAIFTAVWVRERNIADAQVLAELLAECGLSAGRLEQSRDPAVQAHY
EANTRRAIDAGVFGAPSYVVDGELFWGQDRLDFVERKLRAG

Sequences:

>Translated_201_residues
MSISVDYYFSVQSPWTYLGHERFAQLARASGAALRVMPVDLGGKVFPVSGGLPLGQRAPQRQAYRLLELRRFSDHLGMPL
NLKPRYFPVAGDDASRLIIAVDLHDGSDAAMKIGGAIFTAVWVRERNIADAQVLAELLAECGLSAGRLEQSRDPAVQAHY
EANTRRAIDAGVFGAPSYVVDGELFWGQDRLDFVERKLRAG
>Mature_200_residues
SISVDYYFSVQSPWTYLGHERFAQLARASGAALRVMPVDLGGKVFPVSGGLPLGQRAPQRQAYRLLELRRFSDHLGMPLN
LKPRYFPVAGDDASRLIIAVDLHDGSDAAMKIGGAIFTAVWVRERNIADAQVLAELLAECGLSAGRLEQSRDPAVQAHYE
ANTRRAIDAGVFGAPSYVVDGELFWGQDRLDFVERKLRAG

Specific function: Catalyzes the isomerization of 2-hydroxychromene-2- carboxylate (HCCA) to trans-O-hydroxybenzylidenepyruvate (THBPA). The reaction is reversible [H]

COG id: COG3917

COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR014440
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 22088; Mature: 21957

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISVDYYFSVQSPWTYLGHERFAQLARASGAALRVMPVDLGGKVFPVSGGLPLGQRAPQ
CEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCH
RQAYRLLELRRFSDHLGMPLNLKPRYFPVAGDDASRLIIAVDLHDGSDAAMKIGGAIFTA
HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHEEH
VWVRERNIADAQVLAELLAECGLSAGRLEQSRDPAVQAHYEANTRRAIDAGVFGAPSYVV
EEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEHHCCCCCCCCEEE
DGELFWGQDRLDFVERKLRAG
CCEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure 
SISVDYYFSVQSPWTYLGHERFAQLARASGAALRVMPVDLGGKVFPVSGGLPLGQRAPQ
EEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCH
RQAYRLLELRRFSDHLGMPLNLKPRYFPVAGDDASRLIIAVDLHDGSDAAMKIGGAIFTA
HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHEEH
VWVRERNIADAQVLAELLAECGLSAGRLEQSRDPAVQAHYEANTRRAIDAGVFGAPSYVV
EEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEHHCCCCCCCCEEE
DGELFWGQDRLDFVERKLRAG
CCEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002605; 1447127 [H]