| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is nahD [H]
Identifier: 91786151
GI number: 91786151
Start: 263126
End: 263731
Strand: Direct
Name: nahD [H]
Synonym: Bpro_0240
Alternate gene names: 91786151
Gene position: 263126-263731 (Clockwise)
Preceding gene: 91786146
Following gene: 91786152
Centisome position: 5.06
GC content: 65.84
Gene sequence:
>606_bases TTGAGCATTTCAGTGGACTATTACTTTTCGGTGCAGAGCCCGTGGACCTATCTGGGCCATGAGCGCTTTGCACAGTTGGC GCGTGCCAGCGGCGCTGCCTTGCGCGTGATGCCGGTGGACCTGGGCGGCAAGGTTTTTCCCGTTTCGGGCGGGCTGCCGC TGGGCCAGCGCGCCCCGCAGCGGCAGGCCTACCGGCTGCTCGAATTGCGGCGCTTCTCGGACCACCTGGGCATGCCGCTG AACCTCAAGCCCAGGTACTTTCCGGTGGCCGGGGACGATGCCTCGCGCCTCATCATCGCGGTGGATCTGCATGACGGCAG CGACGCGGCCATGAAAATAGGCGGCGCAATCTTCACCGCGGTGTGGGTGCGCGAGCGCAACATCGCCGATGCGCAAGTGC TGGCCGAACTGCTTGCCGAATGCGGTTTGAGTGCCGGGCGCCTGGAGCAGTCCCGCGACCCGGCCGTGCAGGCGCATTAC GAGGCCAATACGCGGCGGGCCATTGACGCCGGCGTGTTCGGCGCGCCCAGCTACGTGGTTGACGGAGAGCTGTTCTGGGG TCAGGATAGGCTCGATTTCGTGGAGCGCAAGCTCAGGGCAGGGTAG
Upstream 100 bases:
>100_bases TCCTGCAAAAATGGGCAATCCCGTGTACAAACCGGGCTTGAAGCCGATCAATGTACTTCAATTGGTGCCGGATGGCGCGC ACTTTCAACCGGAGACTGTC
Downstream 100 bases:
>100_bases GGCTGAGCGGTCCCCTGCAGCCTTGCCCTTCCATTTCCTGATTCCAGTTTTCAGTCCCGGCATCGCCGGTTTCCAACAGA GGAGTAAGCATCTCATGGGT
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: HCCA isomerase [H]
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSISVDYYFSVQSPWTYLGHERFAQLARASGAALRVMPVDLGGKVFPVSGGLPLGQRAPQRQAYRLLELRRFSDHLGMPL NLKPRYFPVAGDDASRLIIAVDLHDGSDAAMKIGGAIFTAVWVRERNIADAQVLAELLAECGLSAGRLEQSRDPAVQAHY EANTRRAIDAGVFGAPSYVVDGELFWGQDRLDFVERKLRAG
Sequences:
>Translated_201_residues MSISVDYYFSVQSPWTYLGHERFAQLARASGAALRVMPVDLGGKVFPVSGGLPLGQRAPQRQAYRLLELRRFSDHLGMPL NLKPRYFPVAGDDASRLIIAVDLHDGSDAAMKIGGAIFTAVWVRERNIADAQVLAELLAECGLSAGRLEQSRDPAVQAHY EANTRRAIDAGVFGAPSYVVDGELFWGQDRLDFVERKLRAG >Mature_200_residues SISVDYYFSVQSPWTYLGHERFAQLARASGAALRVMPVDLGGKVFPVSGGLPLGQRAPQRQAYRLLELRRFSDHLGMPLN LKPRYFPVAGDDASRLIIAVDLHDGSDAAMKIGGAIFTAVWVRERNIADAQVLAELLAECGLSAGRLEQSRDPAVQAHYE ANTRRAIDAGVFGAPSYVVDGELFWGQDRLDFVERKLRAG
Specific function: Catalyzes the isomerization of 2-hydroxychromene-2- carboxylate (HCCA) to trans-O-hydroxybenzylidenepyruvate (THBPA). The reaction is reversible [H]
COG id: COG3917
COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR014440 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 22088; Mature: 21957
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISVDYYFSVQSPWTYLGHERFAQLARASGAALRVMPVDLGGKVFPVSGGLPLGQRAPQ CEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCH RQAYRLLELRRFSDHLGMPLNLKPRYFPVAGDDASRLIIAVDLHDGSDAAMKIGGAIFTA HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHEEH VWVRERNIADAQVLAELLAECGLSAGRLEQSRDPAVQAHYEANTRRAIDAGVFGAPSYVV EEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEHHCCCCCCCCEEE DGELFWGQDRLDFVERKLRAG CCEEEECCCHHHHHHHHHHCC >Mature Secondary Structure SISVDYYFSVQSPWTYLGHERFAQLARASGAALRVMPVDLGGKVFPVSGGLPLGQRAPQ EEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCCH RQAYRLLELRRFSDHLGMPLNLKPRYFPVAGDDASRLIIAVDLHDGSDAAMKIGGAIFTA HHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHEEH VWVRERNIADAQVLAELLAECGLSAGRLEQSRDPAVQAHYEANTRRAIDAGVFGAPSYVV EEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEHHCCCCCCCCEEE DGELFWGQDRLDFVERKLRAG CCEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8002605; 1447127 [H]