Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is creD [H]

Identifier: 91786146

GI number: 91786146

Start: 257516

End: 258895

Strand: Direct

Name: creD [H]

Synonym: Bpro_0235

Alternate gene names: 91786146

Gene position: 257516-258895 (Clockwise)

Preceding gene: 91786145

Following gene: 91786151

Centisome position: 4.95

GC content: 63.41

Gene sequence:

>1380_bases
ATGAAACAAAAATTCGCGGCACTGGCCCTGGTGCTGATACTGCTGGTCCTCGCTCTGCTGAAAATCAGCGACGTGGTGCA
GGACCGCCAGAATCACCGGCAGATCGCCATCCAGAGCGTGGCCCAAAGCCTGGCCGGCCCACAGACGCTGACGGGTCCGC
TCATCCACATGGCCTGCACCGAGGAATGGGAGGTCAGGAATTCCGACAGGCAGGTGCACAGCGAGCGGCGCGAATTCCTG
CTGGTTGCTGCGCCGGCTTCGCTCACCCTCAAGGGCAGCAGCAAGCTGGAGCCGCGCGCCCGCGGGCTGCATGCGACGCA
GGTGTTCAGCCTGAAGGCCGACCTGGTGGCCGAATGGACCGACACGGAGGCGCTCAAACCTGTCGCTGAACATGCAGGCT
CGCGCATGAATTGCGGCCAACCACTGCTGATGCTGGCGGTGTCCGATTCGCGCGGCATCCGCCATGCCAGCGTGAAGGTC
GGCGACCAGGTGTTGGCACTCAAGCCGGGCACGTTTTACGGCAGCTACCCGCGCGGCGTGCATGCACCGCTGCCGCCGGC
CATGGTGCGCTTCCTGCCGCTGCAGGTACAGCTCGGACTGGAACTGGTGGGCACCGAAAGCATTTCGGTGGTGCCACTGG
GTGGCGATACCCGGATGCAGCTCACGTCCAACTGGCCGCACCCGAGTTTCGGCGGCCAATTTTTGCCGGTGGACCGCAAG
ATCACACCGCAAGGGTTCGAGGCCAACTGGCGCGTCAGCTCGCTGGCAAGCACGGCGCAGCAGGACGTCGCGCAAAAGGA
TGCGGCCAGGCGCAAGGGGGCCTGCCCGTCTTACGGCGATGGTTCGGCCCACGGCTCCTGCGTGGAGGCCTTTAGCGTGA
CTTTTGTCGATCCGTCCAATACCTACGCGCTCAGTGACCGGGCCACCAAATACGGTCTGCTCTTCATTGGCCTTACTTTT
CTGGCGGTGGGGCTGTTTGAGTTCATGAAATCACTGCGCGTGCATCCCATCCAGTATTTGCTGGTCGGTGCGGCAATGAG
CATGTTCTTTCTGCTGCTGGTGAGCCTGTCCGAGCACATGCCGTTCGAAAGCGCCTATGTGGTTGCCTCTGCGGCCTGCG
TGCTGCTGCTGACCTATTACGCCAGCCACATGCTGGGCCGCTGGTCGCGCGGCCTGCCTTTTGGCCTGGGTATCGCCATG
CTTTACGGCATGCTGTTTGTGTTGCTGAGGATGGAGCAGACCGCCTTGGTGCTGGGCGCCGTGGCATTGTTCGCCGTGCT
GGCTGCGATCATGATGCTGACCCGCCGGGTTGACTGGTACGCACGCTTTACGCAGGCGGGGCACGTCGGGCAGGCGGAAG
CTGCAAAGGTGGCCGGCTGA

Upstream 100 bases:

>100_bases
GTGGGGGCTTCACATTGACTTCACACAGGCGGGCGGCACCTCATCCGGACTTCACACGCGGTTTGCACACTTCCTTTCGT
TGTCAATACGAAAGGAAGTC

Downstream 100 bases:

>100_bases
TGCGCGCGCCAGGCATTCGAGCAGCCTTAGAAGTGCAGCTCGACCCGCAGCCCGGGGTGGGTGTTGCGCACCACCATGCG
GCCGCCGTGCAGCAGCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MKQKFAALALVLILLVLALLKISDVVQDRQNHRQIAIQSVAQSLAGPQTLTGPLIHMACTEEWEVRNSDRQVHSERREFL
LVAAPASLTLKGSSKLEPRARGLHATQVFSLKADLVAEWTDTEALKPVAEHAGSRMNCGQPLLMLAVSDSRGIRHASVKV
GDQVLALKPGTFYGSYPRGVHAPLPPAMVRFLPLQVQLGLELVGTESISVVPLGGDTRMQLTSNWPHPSFGGQFLPVDRK
ITPQGFEANWRVSSLASTAQQDVAQKDAARRKGACPSYGDGSAHGSCVEAFSVTFVDPSNTYALSDRATKYGLLFIGLTF
LAVGLFEFMKSLRVHPIQYLLVGAAMSMFFLLLVSLSEHMPFESAYVVASAACVLLLTYYASHMLGRWSRGLPFGLGIAM
LYGMLFVLLRMEQTALVLGAVALFAVLAAIMMLTRRVDWYARFTQAGHVGQAEAAKVAG

Sequences:

>Translated_459_residues
MKQKFAALALVLILLVLALLKISDVVQDRQNHRQIAIQSVAQSLAGPQTLTGPLIHMACTEEWEVRNSDRQVHSERREFL
LVAAPASLTLKGSSKLEPRARGLHATQVFSLKADLVAEWTDTEALKPVAEHAGSRMNCGQPLLMLAVSDSRGIRHASVKV
GDQVLALKPGTFYGSYPRGVHAPLPPAMVRFLPLQVQLGLELVGTESISVVPLGGDTRMQLTSNWPHPSFGGQFLPVDRK
ITPQGFEANWRVSSLASTAQQDVAQKDAARRKGACPSYGDGSAHGSCVEAFSVTFVDPSNTYALSDRATKYGLLFIGLTF
LAVGLFEFMKSLRVHPIQYLLVGAAMSMFFLLLVSLSEHMPFESAYVVASAACVLLLTYYASHMLGRWSRGLPFGLGIAM
LYGMLFVLLRMEQTALVLGAVALFAVLAAIMMLTRRVDWYARFTQAGHVGQAEAAKVAG
>Mature_459_residues
MKQKFAALALVLILLVLALLKISDVVQDRQNHRQIAIQSVAQSLAGPQTLTGPLIHMACTEEWEVRNSDRQVHSERREFL
LVAAPASLTLKGSSKLEPRARGLHATQVFSLKADLVAEWTDTEALKPVAEHAGSRMNCGQPLLMLAVSDSRGIRHASVKV
GDQVLALKPGTFYGSYPRGVHAPLPPAMVRFLPLQVQLGLELVGTESISVVPLGGDTRMQLTSNWPHPSFGGQFLPVDRK
ITPQGFEANWRVSSLASTAQQDVAQKDAARRKGACPSYGDGSAHGSCVEAFSVTFVDPSNTYALSDRATKYGLLFIGLTF
LAVGLFEFMKSLRVHPIQYLLVGAAMSMFFLLLVSLSEHMPFESAYVVASAACVLLLTYYASHMLGRWSRGLPFGLGIAM
LYGMLFVLLRMEQTALVLGAVALFAVLAAIMMLTRRVDWYARFTQAGHVGQAEAAKVAG

Specific function: Unknown

COG id: COG4452

COG function: function code V; Inner membrane protein involved in colicin E2 resistance

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790862, Length=422, Percent_Identity=36.0189573459716, Blast_Score=262, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010364 [H]

Pfam domain/function: PF06123 CreD [H]

EC number: NA

Molecular weight: Translated: 49850; Mature: 49850

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKFAALALVLILLVLALLKISDVVQDRQNHRQIAIQSVAQSLAGPQTLTGPLIHMACT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
EEWEVRNSDRQVHSERREFLLVAAPASLTLKGSSKLEPRARGLHATQVFSLKADLVAEWT
CCHHCCCCHHHHHHHHHCEEEEECCCEEEECCCCCCCHHHCCCCHHHHEEEHHHHHCCCC
DTEALKPVAEHAGSRMNCGQPLLMLAVSDSRGIRHASVKVGDQVLALKPGTFYGSYPRGV
CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCC
HAPLPPAMVRFLPLQVQLGLELVGTESISVVPLGGDTRMQLTSNWPHPSFGGQFLPVDRK
CCCCCHHHHHHHHHEEEECEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCEEECCCCC
ITPQGFEANWRVSSLASTAQQDVAQKDAARRKGACPSYGDGSAHGSCVEAFSVTFVDPSN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCC
TYALSDRATKYGLLFIGLTFLAVGLFEFMKSLRVHPIQYLLVGAAMSMFFLLLVSLSEHM
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PFESAYVVASAACVLLLTYYASHMLGRWSRGLPFGLGIAMLYGMLFVLLRMEQTALVLGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALFAVLAAIMMLTRRVDWYARFTQAGHVGQAEAAKVAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
>Mature Secondary Structure
MKQKFAALALVLILLVLALLKISDVVQDRQNHRQIAIQSVAQSLAGPQTLTGPLIHMACT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
EEWEVRNSDRQVHSERREFLLVAAPASLTLKGSSKLEPRARGLHATQVFSLKADLVAEWT
CCHHCCCCHHHHHHHHHCEEEEECCCEEEECCCCCCCHHHCCCCHHHHEEEHHHHHCCCC
DTEALKPVAEHAGSRMNCGQPLLMLAVSDSRGIRHASVKVGDQVLALKPGTFYGSYPRGV
CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCC
HAPLPPAMVRFLPLQVQLGLELVGTESISVVPLGGDTRMQLTSNWPHPSFGGQFLPVDRK
CCCCCHHHHHHHHHEEEECEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCEEECCCCC
ITPQGFEANWRVSSLASTAQQDVAQKDAARRKGACPSYGDGSAHGSCVEAFSVTFVDPSN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCC
TYALSDRATKYGLLFIGLTFLAVGLFEFMKSLRVHPIQYLLVGAAMSMFFLLLVSLSEHM
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PFESAYVVASAACVLLLTYYASHMLGRWSRGLPFGLGIAMLYGMLFVLLRMEQTALVLGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALFAVLAAIMMLTRRVDWYARFTQAGHVGQAEAAKVAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]