| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is creD [H]
Identifier: 91786146
GI number: 91786146
Start: 257516
End: 258895
Strand: Direct
Name: creD [H]
Synonym: Bpro_0235
Alternate gene names: 91786146
Gene position: 257516-258895 (Clockwise)
Preceding gene: 91786145
Following gene: 91786151
Centisome position: 4.95
GC content: 63.41
Gene sequence:
>1380_bases ATGAAACAAAAATTCGCGGCACTGGCCCTGGTGCTGATACTGCTGGTCCTCGCTCTGCTGAAAATCAGCGACGTGGTGCA GGACCGCCAGAATCACCGGCAGATCGCCATCCAGAGCGTGGCCCAAAGCCTGGCCGGCCCACAGACGCTGACGGGTCCGC TCATCCACATGGCCTGCACCGAGGAATGGGAGGTCAGGAATTCCGACAGGCAGGTGCACAGCGAGCGGCGCGAATTCCTG CTGGTTGCTGCGCCGGCTTCGCTCACCCTCAAGGGCAGCAGCAAGCTGGAGCCGCGCGCCCGCGGGCTGCATGCGACGCA GGTGTTCAGCCTGAAGGCCGACCTGGTGGCCGAATGGACCGACACGGAGGCGCTCAAACCTGTCGCTGAACATGCAGGCT CGCGCATGAATTGCGGCCAACCACTGCTGATGCTGGCGGTGTCCGATTCGCGCGGCATCCGCCATGCCAGCGTGAAGGTC GGCGACCAGGTGTTGGCACTCAAGCCGGGCACGTTTTACGGCAGCTACCCGCGCGGCGTGCATGCACCGCTGCCGCCGGC CATGGTGCGCTTCCTGCCGCTGCAGGTACAGCTCGGACTGGAACTGGTGGGCACCGAAAGCATTTCGGTGGTGCCACTGG GTGGCGATACCCGGATGCAGCTCACGTCCAACTGGCCGCACCCGAGTTTCGGCGGCCAATTTTTGCCGGTGGACCGCAAG ATCACACCGCAAGGGTTCGAGGCCAACTGGCGCGTCAGCTCGCTGGCAAGCACGGCGCAGCAGGACGTCGCGCAAAAGGA TGCGGCCAGGCGCAAGGGGGCCTGCCCGTCTTACGGCGATGGTTCGGCCCACGGCTCCTGCGTGGAGGCCTTTAGCGTGA CTTTTGTCGATCCGTCCAATACCTACGCGCTCAGTGACCGGGCCACCAAATACGGTCTGCTCTTCATTGGCCTTACTTTT CTGGCGGTGGGGCTGTTTGAGTTCATGAAATCACTGCGCGTGCATCCCATCCAGTATTTGCTGGTCGGTGCGGCAATGAG CATGTTCTTTCTGCTGCTGGTGAGCCTGTCCGAGCACATGCCGTTCGAAAGCGCCTATGTGGTTGCCTCTGCGGCCTGCG TGCTGCTGCTGACCTATTACGCCAGCCACATGCTGGGCCGCTGGTCGCGCGGCCTGCCTTTTGGCCTGGGTATCGCCATG CTTTACGGCATGCTGTTTGTGTTGCTGAGGATGGAGCAGACCGCCTTGGTGCTGGGCGCCGTGGCATTGTTCGCCGTGCT GGCTGCGATCATGATGCTGACCCGCCGGGTTGACTGGTACGCACGCTTTACGCAGGCGGGGCACGTCGGGCAGGCGGAAG CTGCAAAGGTGGCCGGCTGA
Upstream 100 bases:
>100_bases GTGGGGGCTTCACATTGACTTCACACAGGCGGGCGGCACCTCATCCGGACTTCACACGCGGTTTGCACACTTCCTTTCGT TGTCAATACGAAAGGAAGTC
Downstream 100 bases:
>100_bases TGCGCGCGCCAGGCATTCGAGCAGCCTTAGAAGTGCAGCTCGACCCGCAGCCCGGGGTGGGTGTTGCGCACCACCATGCG GCCGCCGTGCAGCAGCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MKQKFAALALVLILLVLALLKISDVVQDRQNHRQIAIQSVAQSLAGPQTLTGPLIHMACTEEWEVRNSDRQVHSERREFL LVAAPASLTLKGSSKLEPRARGLHATQVFSLKADLVAEWTDTEALKPVAEHAGSRMNCGQPLLMLAVSDSRGIRHASVKV GDQVLALKPGTFYGSYPRGVHAPLPPAMVRFLPLQVQLGLELVGTESISVVPLGGDTRMQLTSNWPHPSFGGQFLPVDRK ITPQGFEANWRVSSLASTAQQDVAQKDAARRKGACPSYGDGSAHGSCVEAFSVTFVDPSNTYALSDRATKYGLLFIGLTF LAVGLFEFMKSLRVHPIQYLLVGAAMSMFFLLLVSLSEHMPFESAYVVASAACVLLLTYYASHMLGRWSRGLPFGLGIAM LYGMLFVLLRMEQTALVLGAVALFAVLAAIMMLTRRVDWYARFTQAGHVGQAEAAKVAG
Sequences:
>Translated_459_residues MKQKFAALALVLILLVLALLKISDVVQDRQNHRQIAIQSVAQSLAGPQTLTGPLIHMACTEEWEVRNSDRQVHSERREFL LVAAPASLTLKGSSKLEPRARGLHATQVFSLKADLVAEWTDTEALKPVAEHAGSRMNCGQPLLMLAVSDSRGIRHASVKV GDQVLALKPGTFYGSYPRGVHAPLPPAMVRFLPLQVQLGLELVGTESISVVPLGGDTRMQLTSNWPHPSFGGQFLPVDRK ITPQGFEANWRVSSLASTAQQDVAQKDAARRKGACPSYGDGSAHGSCVEAFSVTFVDPSNTYALSDRATKYGLLFIGLTF LAVGLFEFMKSLRVHPIQYLLVGAAMSMFFLLLVSLSEHMPFESAYVVASAACVLLLTYYASHMLGRWSRGLPFGLGIAM LYGMLFVLLRMEQTALVLGAVALFAVLAAIMMLTRRVDWYARFTQAGHVGQAEAAKVAG >Mature_459_residues MKQKFAALALVLILLVLALLKISDVVQDRQNHRQIAIQSVAQSLAGPQTLTGPLIHMACTEEWEVRNSDRQVHSERREFL LVAAPASLTLKGSSKLEPRARGLHATQVFSLKADLVAEWTDTEALKPVAEHAGSRMNCGQPLLMLAVSDSRGIRHASVKV GDQVLALKPGTFYGSYPRGVHAPLPPAMVRFLPLQVQLGLELVGTESISVVPLGGDTRMQLTSNWPHPSFGGQFLPVDRK ITPQGFEANWRVSSLASTAQQDVAQKDAARRKGACPSYGDGSAHGSCVEAFSVTFVDPSNTYALSDRATKYGLLFIGLTF LAVGLFEFMKSLRVHPIQYLLVGAAMSMFFLLLVSLSEHMPFESAYVVASAACVLLLTYYASHMLGRWSRGLPFGLGIAM LYGMLFVLLRMEQTALVLGAVALFAVLAAIMMLTRRVDWYARFTQAGHVGQAEAAKVAG
Specific function: Unknown
COG id: COG4452
COG function: function code V; Inner membrane protein involved in colicin E2 resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790862, Length=422, Percent_Identity=36.0189573459716, Blast_Score=262, Evalue=4e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010364 [H]
Pfam domain/function: PF06123 CreD [H]
EC number: NA
Molecular weight: Translated: 49850; Mature: 49850
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKFAALALVLILLVLALLKISDVVQDRQNHRQIAIQSVAQSLAGPQTLTGPLIHMACT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC EEWEVRNSDRQVHSERREFLLVAAPASLTLKGSSKLEPRARGLHATQVFSLKADLVAEWT CCHHCCCCHHHHHHHHHCEEEEECCCEEEECCCCCCCHHHCCCCHHHHEEEHHHHHCCCC DTEALKPVAEHAGSRMNCGQPLLMLAVSDSRGIRHASVKVGDQVLALKPGTFYGSYPRGV CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCC HAPLPPAMVRFLPLQVQLGLELVGTESISVVPLGGDTRMQLTSNWPHPSFGGQFLPVDRK CCCCCHHHHHHHHHEEEECEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCEEECCCCC ITPQGFEANWRVSSLASTAQQDVAQKDAARRKGACPSYGDGSAHGSCVEAFSVTFVDPSN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCC TYALSDRATKYGLLFIGLTFLAVGLFEFMKSLRVHPIQYLLVGAAMSMFFLLLVSLSEHM CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC PFESAYVVASAACVLLLTYYASHMLGRWSRGLPFGLGIAMLYGMLFVLLRMEQTALVLGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VALFAVLAAIMMLTRRVDWYARFTQAGHVGQAEAAKVAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC >Mature Secondary Structure MKQKFAALALVLILLVLALLKISDVVQDRQNHRQIAIQSVAQSLAGPQTLTGPLIHMACT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC EEWEVRNSDRQVHSERREFLLVAAPASLTLKGSSKLEPRARGLHATQVFSLKADLVAEWT CCHHCCCCHHHHHHHHHCEEEEECCCEEEECCCCCCCHHHCCCCHHHHEEEHHHHHCCCC DTEALKPVAEHAGSRMNCGQPLLMLAVSDSRGIRHASVKVGDQVLALKPGTFYGSYPRGV CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCC HAPLPPAMVRFLPLQVQLGLELVGTESISVVPLGGDTRMQLTSNWPHPSFGGQFLPVDRK CCCCCHHHHHHHHHEEEECEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCEEECCCCC ITPQGFEANWRVSSLASTAQQDVAQKDAARRKGACPSYGDGSAHGSCVEAFSVTFVDPSN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCC TYALSDRATKYGLLFIGLTFLAVGLFEFMKSLRVHPIQYLLVGAAMSMFFLLLVSLSEHM CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC PFESAYVVASAACVLLLTYYASHMLGRWSRGLPFGLGIAMLYGMLFVLLRMEQTALVLGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VALFAVLAAIMMLTRRVDWYARFTQAGHVGQAEAAKVAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]