| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is lplT [H]
Identifier: 91786103
GI number: 91786103
Start: 209796
End: 211076
Strand: Reverse
Name: lplT [H]
Synonym: Bpro_0192
Alternate gene names: 91786103
Gene position: 211076-209796 (Counterclockwise)
Preceding gene: 91786106
Following gene: 91786102
Centisome position: 4.06
GC content: 63.39
Gene sequence:
>1281_bases ATGAAGCGCGGTTTTTACACCATCATGGCGGCCCAGTTTTTCAGCTCGCTGGCTGATAACGCGCTGTTTGTAGCCGCCGT GGAACTGCTGAAAACCAGCGGGGCGCCCAAGTGGCAGCCCGCGGCGCTGGTGCCCATGTTCGCGCTGTTTTACGTGGTGC TGGCGCCTTTTGTCGGCGCCTTCGCCGATGCGCGGCCCAAGGGCCAGGTGATGTTTGTGAGCAATGGCATCAAGGTCGTG GGTTGCCTGATGATGCTGTTTGGCTCGCACCCCCTGTTGGCCTATGCCATCGTCGGGCTCGGCGCTGCCGCCTACTCGCC GGCCAAATACGGCATCCTGACCGAACTGCTGCCGGCCTCGCAACTGGTCAAGGCCAATGGCTGGATCGAGGGCCTGACCA TCTCGTCGATCATTCTGGGCGTGCTGCTGGGGGGACAACTGGTGGGCCACTCGGTGTCCAGCCTGCTGCTGTCGATCGAC TTGCCCGTCATCAATACCGGCGTCGACACCGCCCCCGAAGCCGCCATTGCCGTGCTGATCCTGCTGTACAGCATTGCCGC CTGGTTCAACACCCGCATCCCCGACACCGGCGTCGAAATGCGTCCCATGCCGCGCAACAAGCTGGAGCTGCTGCCCGACT TCTGGAACTGCAACGCGGCGCTGTGGCGCGACAAGCTGGGCCAGATCTCGCTGGCCACCACCACGCTGTTCTGGGGCGTG TCGGGCAACCTGCGCTATATCGTGCTGGCCTGGAGTGCGGCCGCCCTGGGCTACAGCACCACGCAGGCCTCTTCGCTGGT GGGTGTGGTGGCCATCGGCACCGCCGTGGGTGCGATCCTGGCCTCGATGCGCATGCGCCTGGACCAGGCCGCGACCGTGA TGCCGCTGGGCATTGCCATGGGTCTTCTGGTCATCCTGATGAATTTCATTGGCAACGTCTGGATCGCCGCGCCCTTTCTG ATCCTGCTGGGCGGCCTGGGCGGTTTTCTGGTGGTGCCCATGAATGCGCTGCTGCAGCACCGGGGCCACAACCTCATGGG CGCAGGCCGCTCGATCGCCGTGCAGAATTTCAACGAACAGGCCTGCATCCTGAGCCTGGGCGCTTTCTACAGCCTGTCCA CCGGCATGGGCCTGTCGGCCTTCGGTGCCATCACCGCCTTTGGCATGGTGGTGGCCAGCTTCATGTGGCTGATCCAGCGC TGGCACAAAAGCAACTGCATCAAATACAAGGAGCAGGTGGATCACCTGCTCAGCATCGCCCGCAGCGACAAATTCCACTG A
Upstream 100 bases:
>100_bases CAGCCCCCATGCTATAAACCAGAATCATTTGGAGACATTCACCCTTATCTTGCGGTATCAGCCCGGCTGATGCAAATCAG GCAGTGATCAACACAATTTA
Downstream 100 bases:
>100_bases TGCCGGCCGACGCGAGCCTTGGTGGGAAGGTACCCGCAGTAAACGACCGTGGGGCCTTATTACCCGCAGGCGCACTGGTC CTCAACGCCTTTGTCTGGGG
Product: lysophospholipid transporter LplT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MKRGFYTIMAAQFFSSLADNALFVAAVELLKTSGAPKWQPAALVPMFALFYVVLAPFVGAFADARPKGQVMFVSNGIKVV GCLMMLFGSHPLLAYAIVGLGAAAYSPAKYGILTELLPASQLVKANGWIEGLTISSIILGVLLGGQLVGHSVSSLLLSID LPVINTGVDTAPEAAIAVLILLYSIAAWFNTRIPDTGVEMRPMPRNKLELLPDFWNCNAALWRDKLGQISLATTTLFWGV SGNLRYIVLAWSAAALGYSTTQASSLVGVVAIGTAVGAILASMRMRLDQAATVMPLGIAMGLLVILMNFIGNVWIAAPFL ILLGGLGGFLVVPMNALLQHRGHNLMGAGRSIAVQNFNEQACILSLGAFYSLSTGMGLSAFGAITAFGMVVASFMWLIQR WHKSNCIKYKEQVDHLLSIARSDKFH
Sequences:
>Translated_426_residues MKRGFYTIMAAQFFSSLADNALFVAAVELLKTSGAPKWQPAALVPMFALFYVVLAPFVGAFADARPKGQVMFVSNGIKVV GCLMMLFGSHPLLAYAIVGLGAAAYSPAKYGILTELLPASQLVKANGWIEGLTISSIILGVLLGGQLVGHSVSSLLLSID LPVINTGVDTAPEAAIAVLILLYSIAAWFNTRIPDTGVEMRPMPRNKLELLPDFWNCNAALWRDKLGQISLATTTLFWGV SGNLRYIVLAWSAAALGYSTTQASSLVGVVAIGTAVGAILASMRMRLDQAATVMPLGIAMGLLVILMNFIGNVWIAAPFL ILLGGLGGFLVVPMNALLQHRGHNLMGAGRSIAVQNFNEQACILSLGAFYSLSTGMGLSAFGAITAFGMVVASFMWLIQR WHKSNCIKYKEQVDHLLSIARSDKFH >Mature_426_residues MKRGFYTIMAAQFFSSLADNALFVAAVELLKTSGAPKWQPAALVPMFALFYVVLAPFVGAFADARPKGQVMFVSNGIKVV GCLMMLFGSHPLLAYAIVGLGAAAYSPAKYGILTELLPASQLVKANGWIEGLTISSIILGVLLGGQLVGHSVSSLLLSID LPVINTGVDTAPEAAIAVLILLYSIAAWFNTRIPDTGVEMRPMPRNKLELLPDFWNCNAALWRDKLGQISLATTTLFWGV SGNLRYIVLAWSAAALGYSTTQASSLVGVVAIGTAVGAILASMRMRLDQAATVMPLGIAMGLLVILMNFIGNVWIAAPFL ILLGGLGGFLVVPMNALLQHRGHNLMGAGRSIAVQNFNEQACILSLGAFYSLSTGMGLSAFGAITAFGMVVASFMWLIQR WHKSNCIKYKEQVDHLLSIARSDKFH
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=405, Percent_Identity=37.7777777777778, Blast_Score=222, Evalue=3e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45472; Mature: 45472
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRGFYTIMAAQFFSSLADNALFVAAVELLKTSGAPKWQPAALVPMFALFYVVLAPFVGA CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FADARPKGQVMFVSNGIKVVGCLMMLFGSHPLLAYAIVGLGAAAYSPAKYGILTELLPAS HHCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHCCHH QLVKANGWIEGLTISSIILGVLLGGQLVGHSVSSLLLSIDLPVINTGVDTAPEAAIAVLI HHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH LLYSIAAWFNTRIPDTGVEMRPMPRNKLELLPDFWNCNAALWRDKLGQISLATTTLFWGV HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCEEEEHHEEEECC SGNLRYIVLAWSAAALGYSTTQASSLVGVVAIGTAVGAILASMRMRLDQAATVMPLGIAM CCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLVILMNFIGNVWIAAPFLILLGGLGGFLVVPMNALLQHRGHNLMGAGRSIAVQNFNEQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC ACILSLGAFYSLSTGMGLSAFGAITAFGMVVASFMWLIQRWHKSNCIKYKEQVDHLLSIA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RSDKFH HCCCCC >Mature Secondary Structure MKRGFYTIMAAQFFSSLADNALFVAAVELLKTSGAPKWQPAALVPMFALFYVVLAPFVGA CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH FADARPKGQVMFVSNGIKVVGCLMMLFGSHPLLAYAIVGLGAAAYSPAKYGILTELLPAS HHCCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHCCHH QLVKANGWIEGLTISSIILGVLLGGQLVGHSVSSLLLSIDLPVINTGVDTAPEAAIAVLI HHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH LLYSIAAWFNTRIPDTGVEMRPMPRNKLELLPDFWNCNAALWRDKLGQISLATTTLFWGV HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCEEEEHHEEEECC SGNLRYIVLAWSAAALGYSTTQASSLVGVVAIGTAVGAILASMRMRLDQAATVMPLGIAM CCCEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLVILMNFIGNVWIAAPFLILLGGLGGFLVVPMNALLQHRGHNLMGAGRSIAVQNFNEQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC ACILSLGAFYSLSTGMGLSAFGAITAFGMVVASFMWLIQRWHKSNCIKYKEQVDHLLSIA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RSDKFH HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA