| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786102
Identifier: 91786102
GI number: 91786102
Start: 208867
End: 209796
Strand: Reverse
Name: 91786102
Synonym: Bpro_0191
Alternate gene names: NA
Gene position: 209796-208867 (Counterclockwise)
Preceding gene: 91786103
Following gene: 91786101
Centisome position: 4.03
GC content: 67.63
Gene sequence:
>930_bases ATGCCGGCCGACGCGAGCCTTGGTGGGAAGGTACCCGCAGTAAACGACCGTGGGGCCTTATTACCCGCAGGCGCACTGGT CCTCAACGCCTTTGTCTGGGGCGTCTCCTGGTGGCCGTTTCGCGAGTTGCTGGCCTATGGCCTGCACCCGCTGTGGGCCA CCGTTCTGATCTACGGCGTGGCCACCCTCAGCGTGCTGGCGTGGCGACCGCAGGCCTGGCGTGGCCTGCTGAAATACCCG GCGCTGCTGCTGCTGCTGGCTGCAGCGGGCCTGACCAATGTCGGCTTCAACTGGGCCGTGACAGTGGGCGACGTCGTGCG GGTGGTGCTGCTGTTTTACCTGATGCCGGCCTGGTCCGTACTGATCGCCTGGGCCGTACTGGGTGAAAAACCAACACCCG CATCGCTGTTCAGGCTGGCACTGGCGCTGACGGGCGTGGTGATTGTGCTGAAGTCGCCCGGCGCGCCGTGGCCGGTGCCG CAAAGTGCTGCCGACTGGCTGAGCCTGATGGGCGGCCTCTGCTTTGCCGTCACCAATGTGCTGCTGCGCAAGCTGGGCTC AACGCCGAGCGAGTCGCGCATGCTGGCGATGTTTGGCGGAGGTGCGGTGATGGCCTGCACAGCCGCGTTGGCCGGCATGG CCTGGCAGATCGTTCCCGCCCCGGCTTTTCAGGCCGGTGGCGTGGGCGTGGCCGTGGGCCTGTGCGTCGCCTTTCTCGCC AGCAATACTGCGCTGCAGTACGGCGCGGCGCGGCTGGCGGCCAGCACTACAGCCATCGTGATGCTGACGGAGATTTTGTT TGCCAGCGGGTCGGCGGCGCTGCTGGGCGCGGCCGATTTCAGCACGCGCACGCTGGCGGGTGGCGGCCTGATTGTGCTGG CCGCCCTGCTGGCCGCGCTGGCGCCGCCACCGCAAACTGGCGCAAAATGA
Upstream 100 bases:
>100_bases TCATGTGGCTGATCCAGCGCTGGCACAAAAGCAACTGCATCAAATACAAGGAGCAGGTGGATCACCTGCTCAGCATCGCC CGCAGCGACAAATTCCACTG
Downstream 100 bases:
>100_bases CTATGAGCCAAGCCGGCTCCGGCAAGGAGCAATCCCATGAACACCGTTTACGCTTTTGAAGCCCGCCAGATCAATGGCCA GAACATCCCGCTTTCCGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPADASLGGKVPAVNDRGALLPAGALVLNAFVWGVSWWPFRELLAYGLHPLWATVLIYGVATLSVLAWRPQAWRGLLKYP ALLLLLAAAGLTNVGFNWAVTVGDVVRVVLLFYLMPAWSVLIAWAVLGEKPTPASLFRLALALTGVVIVLKSPGAPWPVP QSAADWLSLMGGLCFAVTNVLLRKLGSTPSESRMLAMFGGGAVMACTAALAGMAWQIVPAPAFQAGGVGVAVGLCVAFLA SNTALQYGAARLAASTTAIVMLTEILFASGSAALLGAADFSTRTLAGGGLIVLAALLAALAPPPQTGAK
Sequences:
>Translated_309_residues MPADASLGGKVPAVNDRGALLPAGALVLNAFVWGVSWWPFRELLAYGLHPLWATVLIYGVATLSVLAWRPQAWRGLLKYP ALLLLLAAAGLTNVGFNWAVTVGDVVRVVLLFYLMPAWSVLIAWAVLGEKPTPASLFRLALALTGVVIVLKSPGAPWPVP QSAADWLSLMGGLCFAVTNVLLRKLGSTPSESRMLAMFGGGAVMACTAALAGMAWQIVPAPAFQAGGVGVAVGLCVAFLA SNTALQYGAARLAASTTAIVMLTEILFASGSAALLGAADFSTRTLAGGGLIVLAALLAALAPPPQTGAK >Mature_308_residues PADASLGGKVPAVNDRGALLPAGALVLNAFVWGVSWWPFRELLAYGLHPLWATVLIYGVATLSVLAWRPQAWRGLLKYPA LLLLLAAAGLTNVGFNWAVTVGDVVRVVLLFYLMPAWSVLIAWAVLGEKPTPASLFRLALALTGVVIVLKSPGAPWPVPQ SAADWLSLMGGLCFAVTNVLLRKLGSTPSESRMLAMFGGGAVMACTAALAGMAWQIVPAPAFQAGGVGVAVGLCVAFLAS NTALQYGAARLAASTTAIVMLTEILFASGSAALLGAADFSTRTLAGGGLIVLAALLAALAPPPQTGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31711; Mature: 31580
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADASLGGKVPAVNDRGALLPAGALVLNAFVWGVSWWPFRELLAYGLHPLWATVLIYGV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHH ATLSVLAWRPQAWRGLLKYPALLLLLAAAGLTNVGFNWAVTVGDVVRVVLLFYLMPAWSV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHH LIAWAVLGEKPTPASLFRLALALTGVVIVLKSPGAPWPVPQSAADWLSLMGGLCFAVTNV HHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH LLRKLGSTPSESRMLAMFGGGAVMACTAALAGMAWQIVPAPAFQAGGVGVAVGLCVAFLA HHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHH SNTALQYGAARLAASTTAIVMLTEILFASGSAALLGAADFSTRTLAGGGLIVLAALLAAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHCCCCHHHHHHHHHHHH APPPQTGAK CCCCCCCCC >Mature Secondary Structure PADASLGGKVPAVNDRGALLPAGALVLNAFVWGVSWWPFRELLAYGLHPLWATVLIYGV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHH ATLSVLAWRPQAWRGLLKYPALLLLLAAAGLTNVGFNWAVTVGDVVRVVLLFYLMPAWSV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHH LIAWAVLGEKPTPASLFRLALALTGVVIVLKSPGAPWPVPQSAADWLSLMGGLCFAVTNV HHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH LLRKLGSTPSESRMLAMFGGGAVMACTAALAGMAWQIVPAPAFQAGGVGVAVGLCVAFLA HHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHH SNTALQYGAARLAASTTAIVMLTEILFASGSAALLGAADFSTRTLAGGGLIVLAALLAAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHCCCCHHHHHHHHHHHH APPPQTGAK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA