| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786082
Identifier: 91786082
GI number: 91786082
Start: 186019
End: 186456
Strand: Reverse
Name: 91786082
Synonym: Bpro_0171
Alternate gene names: NA
Gene position: 186456-186019 (Counterclockwise)
Preceding gene: 91786084
Following gene: 91786081
Centisome position: 3.59
GC content: 62.1
Gene sequence:
>438_bases GTGGGGGCCCCATCAGCCACAATAGCGGGCATTGACCCTCCGCACATGAAAAACCTCCAACCCAAAGAAGCCTGGACCTG GCTGCAGGCGCACCCCGACACCCTGTTCGTGGATGTGCGCATGGAAATCGAGTCGCTGTATGTCGGCCGCCCGCCCGGTG TGGTCCATGTGCCGTGGTATGAATACCCCGACTTGCAGCCTGATCCGCAGAAATTTGCCGAAGCTGTGGTTCGCGAGGCC ACCGGCAAAACCCAGCCGGTATTGCTGATCTGCCGCTCTGGCAAGCGCACGCTGGACGCCGGCAAGGCGCTGGAGGCCGC CGGATTTTCCGACGTGCAGCATGTGGTGCATGGCTTTGAAGGAGAGCTCGACGAGCAGTTTCGCAGGTCTACGCTCTCGG GCTGGCGCTTTGACGGCCTGCCCTGGGAGCAGATGTAA
Upstream 100 bases:
>100_bases GGGGCTCTATTCCACCAGCAGGGGCCGCGGAACCGGCTTCGCCGGGCCGCAGGTGCAGCGGCCCCCTCGGGGGGCAGGGA GCTACACGCAGTGAGCGACC
Downstream 100 bases:
>100_bases CCCGCCTTCGGCATCAAATCCGGCTGCAACCCCTGTTTCTTTTGAACTTGCAGCTATTATTTTCATAACAAACCTGCATC CGCAGCATCCCCTTGTCTTC
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Sulfide Dehydrogenase; Rhodanese-Like Domain Protein; Rhodanese-Related Sulfurtransferase Protein; Sulfurtransferase Protein; Rhodanese/Cdc25 Fold; Rhodanese-Like Domain-Containing Protein; Sulfate Permease Andrelated Transporter; Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MGAPSATIAGIDPPHMKNLQPKEAWTWLQAHPDTLFVDVRMEIESLYVGRPPGVVHVPWYEYPDLQPDPQKFAEAVVREA TGKTQPVLLICRSGKRTLDAGKALEAAGFSDVQHVVHGFEGELDEQFRRSTLSGWRFDGLPWEQM
Sequences:
>Translated_145_residues MGAPSATIAGIDPPHMKNLQPKEAWTWLQAHPDTLFVDVRMEIESLYVGRPPGVVHVPWYEYPDLQPDPQKFAEAVVREA TGKTQPVLLICRSGKRTLDAGKALEAAGFSDVQHVVHGFEGELDEQFRRSTLSGWRFDGLPWEQM >Mature_144_residues GAPSATIAGIDPPHMKNLQPKEAWTWLQAHPDTLFVDVRMEIESLYVGRPPGVVHVPWYEYPDLQPDPQKFAEAVVREAT GKTQPVLLICRSGKRTLDAGKALEAAGFSDVQHVVHGFEGELDEQFRRSTLSGWRFDGLPWEQM
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16280; Mature: 16148
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPSATIAGIDPPHMKNLQPKEAWTWLQAHPDTLFVDVRMEIESLYVGRPPGVVHVPWY CCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCEEECCCC EYPDLQPDPQKFAEAVVREATGKTQPVLLICRSGKRTLDAGKALEAAGFSDVQHVVHGFE CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHCCC GELDEQFRRSTLSGWRFDGLPWEQM CCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GAPSATIAGIDPPHMKNLQPKEAWTWLQAHPDTLFVDVRMEIESLYVGRPPGVVHVPWY CCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCEEECCCC EYPDLQPDPQKFAEAVVREATGKTQPVLLICRSGKRTLDAGKALEAAGFSDVQHVVHGFE CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHCCC GELDEQFRRSTLSGWRFDGLPWEQM CCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA