| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786080
Identifier: 91786080
GI number: 91786080
Start: 183255
End: 183566
Strand: Reverse
Name: 91786080
Synonym: Bpro_0169
Alternate gene names: NA
Gene position: 183566-183255 (Counterclockwise)
Preceding gene: 91786081
Following gene: 91786079
Centisome position: 3.53
GC content: 62.82
Gene sequence:
>312_bases ATGCACAAATTAGCCCCGCCGGAAATCCAGCAACTGCGCGCCGCCCTGCCCGACTGGCAGTTCAGCGAGGCACGCGGTGG CCTGATCAGCCGTGAATTCAGCTTCGCCGACTTTGTCCAGGCTTTCGGGTTCATGGCCCAGGTCGCCCTGGTTGCCGAAA AGCTCAACCACCACCCCGAATGGTCCAACGTCTACAACCGGGTGGCCATCACCCTGACCACCCACGACGTCCAGGGCCTG TCGACCAACGACGTCGACCTGGCACAACAGGTCGATGCCATCTACGCCCCCTTGAACACCCCGCGCGCTTAG
Upstream 100 bases:
>100_bases CCCCACAGCGCATGGCAACGTGCCCCGTCAAAACTCGCGTCTTCAAACCATCGCTTCGCCCCGCCCTGCCGCCATACCTG CCCTTTCAGGAAGTTCTGCC
Downstream 100 bases:
>100_bases GCAAGACACCATGCAGACACTCCCAGACACCAGCAGCAAACACGGCCTGGCGGCCGGCGACACGGCCCAGCCGGAGCGGG CCGACTGGACCATGGACCAG
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MHKLAPPEIQQLRAALPDWQFSEARGGLISREFSFADFVQAFGFMAQVALVAEKLNHHPEWSNVYNRVAITLTTHDVQGL STNDVDLAQQVDAIYAPLNTPRA
Sequences:
>Translated_103_residues MHKLAPPEIQQLRAALPDWQFSEARGGLISREFSFADFVQAFGFMAQVALVAEKLNHHPEWSNVYNRVAITLTTHDVQGL STNDVDLAQQVDAIYAPLNTPRA >Mature_103_residues MHKLAPPEIQQLRAALPDWQFSEARGGLISREFSFADFVQAFGFMAQVALVAEKLNHHPEWSNVYNRVAITLTTHDVQGL STNDVDLAQQVDAIYAPLNTPRA
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI4557831, Length=102, Percent_Identity=47.0588235294118, Blast_Score=91, Evalue=1e-19, Organism=Homo sapiens, GI134133240, Length=98, Percent_Identity=48.9795918367347, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI115533705, Length=76, Percent_Identity=57.8947368421053, Blast_Score=97, Evalue=2e-21, Organism=Drosophila melanogaster, GI45549100, Length=74, Percent_Identity=52.7027027027027, Blast_Score=88, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 11504; Mature: 11504
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKLAPPEIQQLRAALPDWQFSEARGGLISREFSFADFVQAFGFMAQVALVAEKLNHHPE CCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC WSNVYNRVAITLTTHDVQGLSTNDVDLAQQVDAIYAPLNTPRA HHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHKLAPPEIQQLRAALPDWQFSEARGGLISREFSFADFVQAFGFMAQVALVAEKLNHHPE CCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC WSNVYNRVAITLTTHDVQGLSTNDVDLAQQVDAIYAPLNTPRA HHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA