| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786064
Identifier: 91786064
GI number: 91786064
Start: 163013
End: 163594
Strand: Direct
Name: 91786064
Synonym: Bpro_0153
Alternate gene names: NA
Gene position: 163013-163594 (Clockwise)
Preceding gene: 91786062
Following gene: 91786065
Centisome position: 3.13
GC content: 64.26
Gene sequence:
>582_bases GTGCAGATGTTGCAGGCGCGCGAGGAGGCGATTGTCCAGGCCACCAATCGCCTGCTGGCCGAAAAAGGCTTCGACCTGAT GACGGTTGACGAGGTTGCCGCCGAAGTCGGTATTGCCAAGGCCAGTCTTTACAAGCACTTTTCCAGCAAGGAAGACCTCG CGGCGGCCGCCATGGTGCGGGTGTTGGGGCATGCCCGGACGTTTCTGGCCGGGCTGGCCGCCGACGCGCGGCCGATCGAG CAGCTCAAGGCCGTGGTGCGCTGGATGATGCAGATGCGGCTGGCCGGCGAGATGCCCTCCCTGCCCAGCCAGAACTCCAG CCTGCGTGCGGCGCTGATGGCCAACAAGGCCTATCTTGACGGGTTGATGGTGATCAGCGACCAGATCGGCGGCTGGATTG AACAGGCGCAGCAGGATGGCAGTCTGAACCCGGCCTTGCCCCCCATTCTGGTGCTCTACACGCTCTATGCGCGGGCCTGC GACCCGGTGCTGGAGTTTCTGAAGGCCGGTGGACAGCACAGCGACGCGGAGATCGTCGAGCTGGTGGTGGGCACCTGTTT CGAGGGGTTGAGCAGTCGGTAA
Upstream 100 bases:
>100_bases CGCCATGCCCCCCCGTAGCTCCGTCACCGTCAACCGTGCCGTACCTGCCGCTGCAAAAATCAGTGCGCTCAAAGCCGGCC CGGCCAGGGTTTCCTTCAAG
Downstream 100 bases:
>100_bases CCACGCCTGTGCAGCTGTGCCAGCGCCCGATTCGCCTGACATTGCATAACCTTTCTTGCGTGACCTTTCGGGCGTCACTG CTGTCCCGCAGGTGGGGGCT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcription Regulator TetR Family; Transcriptional Regulator TetR Family; Transcriptional Regulator Tetr Family; TetR Family Transcription Regulator Protein; Regulatory Protein TetR
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MQMLQAREEAIVQATNRLLAEKGFDLMTVDEVAAEVGIAKASLYKHFSSKEDLAAAAMVRVLGHARTFLAGLAADARPIE QLKAVVRWMMQMRLAGEMPSLPSQNSSLRAALMANKAYLDGLMVISDQIGGWIEQAQQDGSLNPALPPILVLYTLYARAC DPVLEFLKAGGQHSDAEIVELVVGTCFEGLSSR
Sequences:
>Translated_193_residues MQMLQAREEAIVQATNRLLAEKGFDLMTVDEVAAEVGIAKASLYKHFSSKEDLAAAAMVRVLGHARTFLAGLAADARPIE QLKAVVRWMMQMRLAGEMPSLPSQNSSLRAALMANKAYLDGLMVISDQIGGWIEQAQQDGSLNPALPPILVLYTLYARAC DPVLEFLKAGGQHSDAEIVELVVGTCFEGLSSR >Mature_193_residues MQMLQAREEAIVQATNRLLAEKGFDLMTVDEVAAEVGIAKASLYKHFSSKEDLAAAAMVRVLGHARTFLAGLAADARPIE QLKAVVRWMMQMRLAGEMPSLPSQNSSLRAALMANKAYLDGLMVISDQIGGWIEQAQQDGSLNPALPPILVLYTLYARAC DPVLEFLKAGGQHSDAEIVELVVGTCFEGLSSR
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20904; Mature: 20904
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMLQAREEAIVQATNRLLAEKGFDLMTVDEVAAEVGIAKASLYKHFSSKEDLAAAAMVR CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VLGHARTFLAGLAADARPIEQLKAVVRWMMQMRLAGEMPSLPSQNSSLRAALMANKAYLD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH GLMVISDQIGGWIEQAQQDGSLNPALPPILVLYTLYARACDPVLEFLKAGGQHSDAEIVE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LVVGTCFEGLSSR HHHHHHHHHHCCC >Mature Secondary Structure MQMLQAREEAIVQATNRLLAEKGFDLMTVDEVAAEVGIAKASLYKHFSSKEDLAAAAMVR CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VLGHARTFLAGLAADARPIEQLKAVVRWMMQMRLAGEMPSLPSQNSSLRAALMANKAYLD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH GLMVISDQIGGWIEQAQQDGSLNPALPPILVLYTLYARACDPVLEFLKAGGQHSDAEIVE HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LVVGTCFEGLSSR HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA