| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is iciA [H]
Identifier: 91786060
GI number: 91786060
Start: 155593
End: 156507
Strand: Direct
Name: iciA [H]
Synonym: Bpro_0149
Alternate gene names: 91786060
Gene position: 155593-156507 (Clockwise)
Preceding gene: 91786058
Following gene: 91786061
Centisome position: 2.99
GC content: 66.56
Gene sequence:
>915_bases ATGAGTACGTTTGACCCCGATGCGCTGGAGTGCCTGGCGGCGATTGTGGAAGAGGGTGGTTTTGAACGCGCAGCCCAGCG CCTGTCGATCACGCAGTCGGCGGTGTCGCAGCGTCTGCGCGCGCTGGAGGCGCAGGTCGGCACCGTGCTGATCGTGCGCA GCCGGCCGCTCAAGCCGACCTCCGCGGGCCAGCTGCTGCTCAAGCACACCAAGATGCTGCGTCTGCTGCGCGCCGACCTG GAGCGCGACCTCAAGGAGCTGGCGCCGAGCTGGCTGGGCGGCGCGCGCGAGGAAGAGCGCATCTCGATCGCCATCAACGC CGACAGCATTGCCACCTGGGCCATGCAGGCGCTGACCGACCTGGCGCAGCAGGGCCTGCCCATGGAAATCATCGCGGACG ACCAGGACTTCACCCAGGAATGGCTGCGCGAAGGCCAGGTGCTGGGTTGCGTCACCACACTCAGGCAGGCCCTGCGCGGC TGCAAGGTGGTCTCTCTGGGCGCCATGGAATATGTCGCCGTGGCCGCACCGGAATTTGCGCGGGACCGGCTGGCCCATGC GACGCTGACCGCCCACAATTTTCGCGACATCCCCTTCGTGGCGTTCAACCGCAAGGACGACATGCAGAGCGAGTTTGTCG GCAAGGCCTTCGGGCTCAAGCGTGTCACGCTCAATCAGCTGTTTGTGCCGTCGTCGGAAGGCCAGGTGCGTGCGGTGCTG GCCGGTTGGGGCGCCAGCGTGGTACCGCGGCTGCTGGCGCAAGGGCTGATTGATCAGGGTCTGCTGGTCAATGTGCTGCC GACCTGCACACTGCCGATCCAGCTGTACTGGCATTGCTGGAATCTGGAGTCCGAGGTGCTGGATGCGCTCACCGCGGCAC TGCGGCAGGCGGCGGCCCTGTCGCTGGTGCCTTGA
Upstream 100 bases:
>100_bases CCTTTCCGTGCATTCGAGTGTGCAGGATGTTGCTTTCAATTAAAAGAAAAATTAAACTCTTAGTGAAAACATCAGAACAG CTAATACTGAGGAAGCTCCC
Downstream 100 bases:
>100_bases CGCGCCGGGCGACAGCCGCCAGCCTGCATGCAACCGAGAGCCGTTCCCCGCTGCCGGCCCGGAGGCTGACGGCTCGCTGA CGCCTGTCCCTTTTTTAGGG
Product: chromosome replication initiation inhibitor protein
Products: NA
Alternate protein names: OriC replication inhibitor [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSTFDPDALECLAAIVEEGGFERAAQRLSITQSAVSQRLRALEAQVGTVLIVRSRPLKPTSAGQLLLKHTKMLRLLRADL ERDLKELAPSWLGGAREEERISIAINADSIATWAMQALTDLAQQGLPMEIIADDQDFTQEWLREGQVLGCVTTLRQALRG CKVVSLGAMEYVAVAAPEFARDRLAHATLTAHNFRDIPFVAFNRKDDMQSEFVGKAFGLKRVTLNQLFVPSSEGQVRAVL AGWGASVVPRLLAQGLIDQGLLVNVLPTCTLPIQLYWHCWNLESEVLDALTAALRQAAALSLVP
Sequences:
>Translated_304_residues MSTFDPDALECLAAIVEEGGFERAAQRLSITQSAVSQRLRALEAQVGTVLIVRSRPLKPTSAGQLLLKHTKMLRLLRADL ERDLKELAPSWLGGAREEERISIAINADSIATWAMQALTDLAQQGLPMEIIADDQDFTQEWLREGQVLGCVTTLRQALRG CKVVSLGAMEYVAVAAPEFARDRLAHATLTAHNFRDIPFVAFNRKDDMQSEFVGKAFGLKRVTLNQLFVPSSEGQVRAVL AGWGASVVPRLLAQGLIDQGLLVNVLPTCTLPIQLYWHCWNLESEVLDALTAALRQAAALSLVP >Mature_303_residues STFDPDALECLAAIVEEGGFERAAQRLSITQSAVSQRLRALEAQVGTVLIVRSRPLKPTSAGQLLLKHTKMLRLLRADLE RDLKELAPSWLGGAREEERISIAINADSIATWAMQALTDLAQQGLPMEIIADDQDFTQEWLREGQVLGCVTTLRQALRGC KVVSLGAMEYVAVAAPEFARDRLAHATLTAHNFRDIPFVAFNRKDDMQSEFVGKAFGLKRVTLNQLFVPSSEGQVRAVLA GWGASVVPRLLAQGLIDQGLLVNVLPTCTLPIQLYWHCWNLESEVLDALTAALRQAAALSLVP
Specific function: Specific inhibitor of chromosomal initiation of replication in vitro. Binds the three 13-mers in the origin (oriC) to block initiation of replication [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789283, Length=298, Percent_Identity=36.5771812080537, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1786713, Length=297, Percent_Identity=26.5993265993266, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR005119 - InterPro: IPR017685 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]
EC number: NA
Molecular weight: Translated: 33322; Mature: 33191
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFDPDALECLAAIVEEGGFERAAQRLSITQSAVSQRLRALEAQVGTVLIVRSRPLKPT CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCC SAGQLLLKHTKMLRLLRADLERDLKELAPSWLGGAREEERISIAINADSIATWAMQALTD CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHH LAQQGLPMEIIADDQDFTQEWLREGQVLGCVTTLRQALRGCKVVSLGAMEYVAVAAPEFA HHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHCCCHHH RDRLAHATLTAHNFRDIPFVAFNRKDDMQSEFVGKAFGLKRVTLNQLFVPSSEGQVRAVL HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHEECCCCCCCEEEEE AGWGASVVPRLLAQGLIDQGLLVNVLPTCTLPIQLYWHCWNLESEVLDALTAALRQAAAL ECCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHH SLVP CCCC >Mature Secondary Structure STFDPDALECLAAIVEEGGFERAAQRLSITQSAVSQRLRALEAQVGTVLIVRSRPLKPT CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCC SAGQLLLKHTKMLRLLRADLERDLKELAPSWLGGAREEERISIAINADSIATWAMQALTD CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHH LAQQGLPMEIIADDQDFTQEWLREGQVLGCVTTLRQALRGCKVVSLGAMEYVAVAAPEFA HHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHCCCHHH RDRLAHATLTAHNFRDIPFVAFNRKDDMQSEFVGKAFGLKRVTLNQLFVPSSEGQVRAVL HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHEECCCCCCCEEEEE AGWGASVVPRLLAQGLIDQGLLVNVLPTCTLPIQLYWHCWNLESEVLDALTAALRQAAAL ECCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHH SLVP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA