| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is livK [C]
Identifier: 91786061
GI number: 91786061
Start: 156670
End: 157923
Strand: Direct
Name: livK [C]
Synonym: Bpro_0150
Alternate gene names: 91786061
Gene position: 156670-157923 (Clockwise)
Preceding gene: 91786060
Following gene: 91786062
Centisome position: 3.01
GC content: 61.8
Gene sequence:
>1254_bases ATGTTCATCAACTCACGTCTTGCCGGCTTCGGCGTTGCCGGTGCCGTTGCCGCCATCGTGGCGCTGGGCACCGCGCTGCC GGCGGCAGCCCAGGGGGTTTCCGCTGCGGCGGCACCTCCGTCCCCGGCCGCCAACACGCTCAAGATTGGCGTGATAGGTC CCTTCACCGGTGCGTCATCCGACTTCGGCGTGCCCATGCTCAACGGCATCCAGCAGGCTGTGGACGAGATCAATGCGGTG GGCGGCTACCTGGGCCGCAAGCTGGAGATTGTGCGCAAGGACGACAAGGCCAACCCCGATGTGGGCCTGAAAATGTCGCA GGAACTGGTCGCCGAAAAAGTGTCTGTAACCCTTGGCTTTTGCAATACCGGCGTGGCCGCCAAGTCGCTGGAGGTCTACC AGGCCAACAAGCTGCCACTGATCATTCCGTGCGCCACCGGCTCGCCGCTCACGGCGAAATACCCCGCAGCGGAGAGCTAT ATCTTTCGCACGTCGGCCAGCGACAGCATCCAGGCCCCGTTCGTCGTGGAGGACATCCTCAAGCGCGGCTGGAACAGGGT GGCGGTGTTTGCCGACACCACCGGGTATGGCGAAGCCGGCCTGCAGGATGTGGAAAAGGCGTTGGCCGCCAAAAACCTCA AGCCCGTTTATGTCGCCCGTTTTGCGCTGGGCGTGAAGGACCTCGGCGAAGAATTGAAGGCCGCCAAAGCGGCGGGCGCC AACGTGGTGTTCAGCTATACCGTGGGACCGGAGAACGCCGTGATCGCGCATGGCCGCCAGGCCCTGAACTGGAAGGTGCC GCAAGTGGGCGCATGGACCTTGTCATTTCCGTTTTTCATCGATGGCGGAAAGGATGCGGCCGATGGCGCACTGATGGCGC AGACATTCATTGCCGAGCCCAGCAACGAGCGACGCGCTTCTTTTCTGACCAGTTACGCCCGCAAATTCAATGTCAGGAAA ATTCCGGTGCCCATGGCGGCTGCGCAGGGCTATGACGCCGTCTACCTCCTGATCTACTCGCTGTTCGGCATACGCGACGG CAACCTCAGCGGCCCTGCCATCAAGGCCGCCCTTGAAAGCAAGAGCCGCACCTATTACGGCGTGGTGGCTACCTATGACC AGCCTTTCAGCAAGCAGGACAAAGACGCCACCACGCAGAACATGCTGGTGATGGGCATGGTGAAAAATGGCGCAGTCACG TTTGCCTACCCCGAGGATGCCAAGCGCAACCTGTTTGTGCAGCGCAAGCAGTAG
Upstream 100 bases:
>100_bases AGGCTGACGGCTCGCTGACGCCTGTCCCTTTTTTAGGGGAAAGTCTGGTGCGTCCCCGCGCCCGGCGCCACCTATCCTGC ATGGCTACAGGAGACACAAC
Downstream 100 bases:
>100_bases CCGCCCGCGCGCACCTGCAAGCCCGCGAGCCGCAGCCCGCGGCCGAGCCTATTTACAAACATCATCGCTTTCCGCACACT CGGGCAAGATGCGTGCATGG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MFINSRLAGFGVAGAVAAIVALGTALPAAAQGVSAAAAPPSPAANTLKIGVIGPFTGASSDFGVPMLNGIQQAVDEINAV GGYLGRKLEIVRKDDKANPDVGLKMSQELVAEKVSVTLGFCNTGVAAKSLEVYQANKLPLIIPCATGSPLTAKYPAAESY IFRTSASDSIQAPFVVEDILKRGWNRVAVFADTTGYGEAGLQDVEKALAAKNLKPVYVARFALGVKDLGEELKAAKAAGA NVVFSYTVGPENAVIAHGRQALNWKVPQVGAWTLSFPFFIDGGKDAADGALMAQTFIAEPSNERRASFLTSYARKFNVRK IPVPMAAAQGYDAVYLLIYSLFGIRDGNLSGPAIKAALESKSRTYYGVVATYDQPFSKQDKDATTQNMLVMGMVKNGAVT FAYPEDAKRNLFVQRKQ
Sequences:
>Translated_417_residues MFINSRLAGFGVAGAVAAIVALGTALPAAAQGVSAAAAPPSPAANTLKIGVIGPFTGASSDFGVPMLNGIQQAVDEINAV GGYLGRKLEIVRKDDKANPDVGLKMSQELVAEKVSVTLGFCNTGVAAKSLEVYQANKLPLIIPCATGSPLTAKYPAAESY IFRTSASDSIQAPFVVEDILKRGWNRVAVFADTTGYGEAGLQDVEKALAAKNLKPVYVARFALGVKDLGEELKAAKAAGA NVVFSYTVGPENAVIAHGRQALNWKVPQVGAWTLSFPFFIDGGKDAADGALMAQTFIAEPSNERRASFLTSYARKFNVRK IPVPMAAAQGYDAVYLLIYSLFGIRDGNLSGPAIKAALESKSRTYYGVVATYDQPFSKQDKDATTQNMLVMGMVKNGAVT FAYPEDAKRNLFVQRKQ >Mature_417_residues MFINSRLAGFGVAGAVAAIVALGTALPAAAQGVSAAAAPPSPAANTLKIGVIGPFTGASSDFGVPMLNGIQQAVDEINAV GGYLGRKLEIVRKDDKANPDVGLKMSQELVAEKVSVTLGFCNTGVAAKSLEVYQANKLPLIIPCATGSPLTAKYPAAESY IFRTSASDSIQAPFVVEDILKRGWNRVAVFADTTGYGEAGLQDVEKALAAKNLKPVYVARFALGVKDLGEELKAAKAAGA NVVFSYTVGPENAVIAHGRQALNWKVPQVGAWTLSFPFFIDGGKDAADGALMAQTFIAEPSNERRASFLTSYARKFNVRK IPVPMAAAQGYDAVYLLIYSLFGIRDGNLSGPAIKAALESKSRTYYGVVATYDQPFSKQDKDATTQNMLVMGMVKNGAVT FAYPEDAKRNLFVQRKQ
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=277, Percent_Identity=26.7148014440433, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI48994941, Length=228, Percent_Identity=27.6315789473684, Blast_Score=89, Evalue=8e-19,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 44078; Mature: 44078
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFINSRLAGFGVAGAVAAIVALGTALPAAAQGVSAAAAPPSPAANTLKIGVIGPFTGASS CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCC DFGVPMLNGIQQAVDEINAVGGYLGRKLEIVRKDDKANPDVGLKMSQELVAEKVSVTLGF CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEEEE CNTGVAAKSLEVYQANKLPLIIPCATGSPLTAKYPAAESYIFRTSASDSIQAPFVVEDIL CCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHHHH KRGWNRVAVFADTTGYGEAGLQDVEKALAAKNLKPVYVARFALGVKDLGEELKAAKAAGA HCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCC NVVFSYTVGPENAVIAHGRQALNWKVPQVGAWTLSFPFFIDGGKDAADGALMAQTFIAEP EEEEEEEECCCCEEEECCCHHCEEECCCCCEEEEECCEEEECCCCCCCCHHHHHHHHCCC SNERRASFLTSYARKFNVRKIPVPMAAAQGYDAVYLLIYSLFGIRDGNLSGPAIKAALES CCHHHHHHHHHHHHHCCCEECCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHC KSRTYYGVVATYDQPFSKQDKDATTQNMLVMGMVKNGAVTFAYPEDAKRNLFVQRKQ CCCEEEEEEEECCCCCCCCCCCCCHHCEEEEEEECCCEEEEECCCCCCCCEEEEECC >Mature Secondary Structure MFINSRLAGFGVAGAVAAIVALGTALPAAAQGVSAAAAPPSPAANTLKIGVIGPFTGASS CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCC DFGVPMLNGIQQAVDEINAVGGYLGRKLEIVRKDDKANPDVGLKMSQELVAEKVSVTLGF CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEEEE CNTGVAAKSLEVYQANKLPLIIPCATGSPLTAKYPAAESYIFRTSASDSIQAPFVVEDIL CCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCEEEEECCCCCCCCCHHHHHHH KRGWNRVAVFADTTGYGEAGLQDVEKALAAKNLKPVYVARFALGVKDLGEELKAAKAAGA HCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCC NVVFSYTVGPENAVIAHGRQALNWKVPQVGAWTLSFPFFIDGGKDAADGALMAQTFIAEP EEEEEEEECCCCEEEECCCHHCEEECCCCCEEEEECCEEEECCCCCCCCHHHHHHHHCCC SNERRASFLTSYARKFNVRKIPVPMAAAQGYDAVYLLIYSLFGIRDGNLSGPAIKAALES CCHHHHHHHHHHHHHCCCEECCCCHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHC KSRTYYGVVATYDQPFSKQDKDATTQNMLVMGMVKNGAVTFAYPEDAKRNLFVQRKQ CCCEEEEEEEECCCCCCCCCCCCCHHCEEEEEEECCCEEEEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]