| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786047
Identifier: 91786047
GI number: 91786047
Start: 141985
End: 143061
Strand: Reverse
Name: 91786047
Synonym: Bpro_0136
Alternate gene names: NA
Gene position: 143061-141985 (Counterclockwise)
Preceding gene: 91786048
Following gene: 91786046
Centisome position: 2.75
GC content: 69.82
Gene sequence:
>1077_bases ATGCTTCGCCATCTGCTGCCCCACATCGGCAGCCTGCCGCCAGGGCCGCGCAATGCCATCACCGACGTGGCCGGTGTCAC CGTGGGCCATTGCACGCTTGACGCCCACGAAGTGCAGACCGGTGTGACGGTGGTCTGCCCCCATGGCGGCGATCTGTTCC GCGACCGGGTGCCCGCGGCCGCGGTCGTGCTCAACGGCTTCGGCAAGAGTGTGGGACTGGTGCAGGTCGAGGAACTCGGC GTTCTGGAAACGCCGATTGCGCTGACCAACACCTTTTCGGTCGCCCCCGTGGCCGAGGCACAAATCCGCCAGTGCATCGC CGCCAACCCCGAAACCGGCCGCAGCCTGCCCACGGTCAATCCGCTGGTATTTGAATGCAACGACGGCTTTCTCAACGACA TCCAGCGCATGGCCGTCACCGGGCAGCACTACCTGCAAGCCTGCGCGCAAGCGGGCACGGACGTCGAGGAAGGCTCGGTC GGTGCCGGGCGCGGCATGTCGAGCTTTGGTCTCAAGGGTGGCATCGGCACGGCGTCGCGCCGTGTGCCGGCACCTGGCGG CGGCGAACACACCGTCGGCGCGCTGGTGCTGGCCAACTACGGCCGGCTGCCGCAGCTGGTCATGGCCGGGCAGGCCCTGG GCGCCCGGCTGGCCAGCCAGTTGGCCGGCCCCTTGGCGCTGGAGGCTGACGAACCCGAGAAGGGCTCCATCATCCTGCTG ATTGCCACCGATGCGCCGCTCGATGCGCGCCAGCTGCGCCGGCTGGCGCTGCGCGCCGGCGCCGGCCTGGCCCGCACCGG TTCGGTGTTCGGCCACGGCAGCGGCGACATCGCCCTGGCGTTTTCCACCGCCTACACCGTGCCCCAGCAAACCGACAGAC CCATGCCGGCCGTGGCCATGCTGCATGACGGCCTGATCGACCCGCTGTTTCAGGCCGTGGCCGACAGCACCGAGCAGGCC ATCGTCCACGCCCTCTGCTGCGCCCGTGCCGTGACCGGCCGCAACGGCCACCACCGCAAGGCACTGGCCGATCTGCTGCC CGACGGCGCTGCGCCGACACATCCACAGACACCCTGA
Upstream 100 bases:
>100_bases GGCGATTTTCCTGACGGTGCTGGCCTTCAACCTGCTGGGTGACGGCCTGCGCGATGCGCTGGACCCCAAAATTGACCGCC AGTAGGAAAGCCTTTTCGTG
Downstream 100 bases:
>100_bases ACGAGTTCCCATGAAAGTCCTGATTTCCACCGACATCGAAGGCGTTGCCGGCGTTTTCCACCACGAGCAGGTGCGCAGCG GCAACCCCGAGTACGAGCGC
Product: aminopeptidase DmpA
Products: NA
Alternate protein names: D-Aminopeptidase; Aminopeptidase DmpA; L-Aminopeptidase/D-Esterase; Aminopeptidase; Peptidase S; T4 Family Peptidase; Peptidase T4 Family; Family; S58 Family Peptidase; L-Aminopeptidase DmpA; D-Amino Peptidase Dmpa Family; Serine Peptidase; L-Aminopeptidase Dmpa; Aminopeptidase DpmA; D-Alanine-D-Alanine Ligase / Aminopeptidase; Peptidase Family; Aminopeptidase-Like Protein; D-Aminopeptidease; D-AMINO PEPTIDASE DmpA Family; L-Aminopeptidase D-Ala-Esterase/Amidase
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MLRHLLPHIGSLPPGPRNAITDVAGVTVGHCTLDAHEVQTGVTVVCPHGGDLFRDRVPAAAVVLNGFGKSVGLVQVEELG VLETPIALTNTFSVAPVAEAQIRQCIAANPETGRSLPTVNPLVFECNDGFLNDIQRMAVTGQHYLQACAQAGTDVEEGSV GAGRGMSSFGLKGGIGTASRRVPAPGGGEHTVGALVLANYGRLPQLVMAGQALGARLASQLAGPLALEADEPEKGSIILL IATDAPLDARQLRRLALRAGAGLARTGSVFGHGSGDIALAFSTAYTVPQQTDRPMPAVAMLHDGLIDPLFQAVADSTEQA IVHALCCARAVTGRNGHHRKALADLLPDGAAPTHPQTP
Sequences:
>Translated_358_residues MLRHLLPHIGSLPPGPRNAITDVAGVTVGHCTLDAHEVQTGVTVVCPHGGDLFRDRVPAAAVVLNGFGKSVGLVQVEELG VLETPIALTNTFSVAPVAEAQIRQCIAANPETGRSLPTVNPLVFECNDGFLNDIQRMAVTGQHYLQACAQAGTDVEEGSV GAGRGMSSFGLKGGIGTASRRVPAPGGGEHTVGALVLANYGRLPQLVMAGQALGARLASQLAGPLALEADEPEKGSIILL IATDAPLDARQLRRLALRAGAGLARTGSVFGHGSGDIALAFSTAYTVPQQTDRPMPAVAMLHDGLIDPLFQAVADSTEQA IVHALCCARAVTGRNGHHRKALADLLPDGAAPTHPQTP >Mature_358_residues MLRHLLPHIGSLPPGPRNAITDVAGVTVGHCTLDAHEVQTGVTVVCPHGGDLFRDRVPAAAVVLNGFGKSVGLVQVEELG VLETPIALTNTFSVAPVAEAQIRQCIAANPETGRSLPTVNPLVFECNDGFLNDIQRMAVTGQHYLQACAQAGTDVEEGSV GAGRGMSSFGLKGGIGTASRRVPAPGGGEHTVGALVLANYGRLPQLVMAGQALGARLASQLAGPLALEADEPEKGSIILL IATDAPLDARQLRRLALRAGAGLARTGSVFGHGSGDIALAFSTAYTVPQQTDRPMPAVAMLHDGLIDPLFQAVADSTEQA IVHALCCARAVTGRNGHHRKALADLLPDGAAPTHPQTP
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36880; Mature: 36880
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRHLLPHIGSLPPGPRNAITDVAGVTVGHCTLDAHEVQTGVTVVCPHGGDLFRDRVPAA CHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECCHHHHCCCCEEEECCCCHHHHHCCCHH AVVLNGFGKSVGLVQVEELGVLETPIALTNTFSVAPVAEAQIRQCIAANPETGRSLPTVN HHHHHCCCCCCCEEEHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC PLVFECNDGFLNDIQRMAVTGQHYLQACAQAGTDVEEGSVGAGRGMSSFGLKGGIGTASR CEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC RVPAPGGGEHTVGALVLANYGRLPQLVMAGQALGARLASQLAGPLALEADEPEKGSIILL CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEE IATDAPLDARQLRRLALRAGAGLARTGSVFGHGSGDIALAFSTAYTVPQQTDRPMPAVAM EECCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCHHHH LHDGLIDPLFQAVADSTEQAIVHALCCARAVTGRNGHHRKALADLLPDGAAPTHPQTP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLRHLLPHIGSLPPGPRNAITDVAGVTVGHCTLDAHEVQTGVTVVCPHGGDLFRDRVPAA CHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECCHHHHCCCCEEEECCCCHHHHHCCCHH AVVLNGFGKSVGLVQVEELGVLETPIALTNTFSVAPVAEAQIRQCIAANPETGRSLPTVN HHHHHCCCCCCCEEEHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC PLVFECNDGFLNDIQRMAVTGQHYLQACAQAGTDVEEGSVGAGRGMSSFGLKGGIGTASR CEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC RVPAPGGGEHTVGALVLANYGRLPQLVMAGQALGARLASQLAGPLALEADEPEKGSIILL CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEE IATDAPLDARQLRRLALRAGAGLARTGSVFGHGSGDIALAFSTAYTVPQQTDRPMPAVAM EECCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCHHHH LHDGLIDPLFQAVADSTEQAIVHALCCARAVTGRNGHHRKALADLLPDGAAPTHPQTP HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA