The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786043

Identifier: 91786043

GI number: 91786043

Start: 136635

End: 137714

Strand: Direct

Name: 91786043

Synonym: Bpro_0132

Alternate gene names: NA

Gene position: 136635-137714 (Clockwise)

Preceding gene: 91786042

Following gene: 91786044

Centisome position: 2.63

GC content: 69.91

Gene sequence:

>1080_bases
ATGAGCGGATTCGCACACGCTGGCGTTGCGCGGCGGGCTGCCCTGCTGGGGCTGCTCGGCATGGCGGCCACGGCCACGCT
GCCCGCGTGGTCGGCCACTGCCCCGGCCGTGCTGTCGCAAGCCGCCCTGATGACGCCCAAGGCTCTGGGCGCGGCCACGC
TGGCCGTGACCCGCGCAGGCAAGCGCCTGGTGGCCGTGGGCGAGCGCGGCACCGTGCTGCTGTCGGACGACCACGGCGCC
CGCTGGAAGCAGGCCCAGGTGCCGGTGCAAGCCACCCTCACGACCGTGCGGTTTACCGATGAAAAAACCGGCTGGGCGGC
AGGCCATCTGGGCGTGATTTTGCGCAGCATTGACGCCGGCGCCACCTGGCACAAGCAGCTCGACGGCATCCAGGCCGCTG
CGCTGGCATTGCAGGCCGCGCAGGGCACGGGAGATGCAAAGGCGATTGCCAATGCCCGGCGCCTGGTGGAAGAGGGCGCG
GACAAACCGTTTTTTGACCTGGAATTCATCGACGCGCAACGCGGCTTTGCCGTGGGGGCCTACGGCCTGATGTTCACCAC
CGTGGACGGCGGCAAGACCTGGGCGGCGGTGGGGCCGCGTTTGCCCAACCCCAGATCCTTGCACCTGTACGGCGTGCGCG
CCCATGGCAGCACGCTGGTGATCGCCGGCGAGCAGGGCTTGCTGCTGCGCTCCACCGATGGGGGTGCCAGCTTTAGCGCG
CTGGAGTCGCCCTACAAAGGCAGCTTTTTTGGCTTGCTGCACACCGCTGGCGATGTCTGGGTGGCCTACGGCCTGCGCGG
CACGGCCTACCGCTCCACGGACGCGGGCACGCACTGGGAAAAACTCGACACCGGCCTGCCCATGGCTGTCGGCGCGGGCG
CGGCTTTGGCCGGCGGCGGCTTTGTGCTGATGGGTCAGGCCGGGGACGCATTGGTGGGGCGCGACGATGGGCCCGCGCTC
AAGCGTGTGCCTGCGCGCGAGCCGGTTCCGGTGTCTGGTGTCGCCATCGCAGCCGATGGCAGCCTGGTGCTGGCCAGCCT
GCGCGGCATGCGACGGCTGCCTGCCCTGTCTGTTGATTGA

Upstream 100 bases:

>100_bases
ACATGGCCTCCAACGAAATGCCCAGGCAGTATGAAATCGTGCCCCCGATTCCGCGCAGCTTCTTCAGCGCTGAATCCTTG
TCCAACGAAGGCGCGCGCTG

Downstream 100 bases:

>100_bases
AGAAAATTTTATGCACGCCGATTCCTCCTCCATCAACGCATCCAGCCAGCCTGTCGTCGCGCGGCTTGAAGATTTCGACA
CGCGCTCCGGCACGCTGCTC

Product: BNR repeat-containing glycosyl hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSGFAHAGVARRAALLGLLGMAATATLPAWSATAPAVLSQAALMTPKALGAATLAVTRAGKRLVAVGERGTVLLSDDHGA
RWKQAQVPVQATLTTVRFTDEKTGWAAGHLGVILRSIDAGATWHKQLDGIQAAALALQAAQGTGDAKAIANARRLVEEGA
DKPFFDLEFIDAQRGFAVGAYGLMFTTVDGGKTWAAVGPRLPNPRSLHLYGVRAHGSTLVIAGEQGLLLRSTDGGASFSA
LESPYKGSFFGLLHTAGDVWVAYGLRGTAYRSTDAGTHWEKLDTGLPMAVGAGAALAGGGFVLMGQAGDALVGRDDGPAL
KRVPAREPVPVSGVAIAADGSLVLASLRGMRRLPALSVD

Sequences:

>Translated_359_residues
MSGFAHAGVARRAALLGLLGMAATATLPAWSATAPAVLSQAALMTPKALGAATLAVTRAGKRLVAVGERGTVLLSDDHGA
RWKQAQVPVQATLTTVRFTDEKTGWAAGHLGVILRSIDAGATWHKQLDGIQAAALALQAAQGTGDAKAIANARRLVEEGA
DKPFFDLEFIDAQRGFAVGAYGLMFTTVDGGKTWAAVGPRLPNPRSLHLYGVRAHGSTLVIAGEQGLLLRSTDGGASFSA
LESPYKGSFFGLLHTAGDVWVAYGLRGTAYRSTDAGTHWEKLDTGLPMAVGAGAALAGGGFVLMGQAGDALVGRDDGPAL
KRVPAREPVPVSGVAIAADGSLVLASLRGMRRLPALSVD
>Mature_358_residues
SGFAHAGVARRAALLGLLGMAATATLPAWSATAPAVLSQAALMTPKALGAATLAVTRAGKRLVAVGERGTVLLSDDHGAR
WKQAQVPVQATLTTVRFTDEKTGWAAGHLGVILRSIDAGATWHKQLDGIQAAALALQAAQGTGDAKAIANARRLVEEGAD
KPFFDLEFIDAQRGFAVGAYGLMFTTVDGGKTWAAVGPRLPNPRSLHLYGVRAHGSTLVIAGEQGLLLRSTDGGASFSAL
ESPYKGSFFGLLHTAGDVWVAYGLRGTAYRSTDAGTHWEKLDTGLPMAVGAGAALAGGGFVLMGQAGDALVGRDDGPALK
RVPAREPVPVSGVAIAADGSLVLASLRGMRRLPALSVD

Specific function: Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity [H]

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 BNR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002860
- InterPro:   IPR016705
- InterPro:   IPR015943 [H]

Pfam domain/function: PF02012 BNR [H]

EC number: NA

Molecular weight: Translated: 36818; Mature: 36686

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFAHAGVARRAALLGLLGMAATATLPAWSATAPAVLSQAALMTPKALGAATLAVTRAG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHCHHHEEEECCC
KRLVAVGERGTVLLSDDHGARWKQAQVPVQATLTTVRFTDEKTGWAAGHLGVILRSIDAG
CEEEEECCCCEEEEECCCCCCCHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCC
ATWHKQLDGIQAAALALQAAQGTGDAKAIANARRLVEEGADKPFFDLEFIDAQRGFAVGA
CHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEE
YGLMFTTVDGGKTWAAVGPRLPNPRSLHLYGVRAHGSTLVIAGEQGLLLRSTDGGASFSA
EEEEEEEECCCCEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCEEEEECCCCCCHHH
LESPYKGSFFGLLHTAGDVWVAYGLRGTAYRSTDAGTHWEKLDTGLPMAVGAGAALAGGG
HCCCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCCCHHHHCCCCCEEECCCCEECCCC
FVLMGQAGDALVGRDDGPALKRVPAREPVPVSGVAIAADGSLVLASLRGMRRLPALSVD
EEEEECCCCEEEECCCCCHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGFAHAGVARRAALLGLLGMAATATLPAWSATAPAVLSQAALMTPKALGAATLAVTRAG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHCHHHEEEECCC
KRLVAVGERGTVLLSDDHGARWKQAQVPVQATLTTVRFTDEKTGWAAGHLGVILRSIDAG
CEEEEECCCCEEEEECCCCCCCHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCC
ATWHKQLDGIQAAALALQAAQGTGDAKAIANARRLVEEGADKPFFDLEFIDAQRGFAVGA
CHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEE
YGLMFTTVDGGKTWAAVGPRLPNPRSLHLYGVRAHGSTLVIAGEQGLLLRSTDGGASFSA
EEEEEEEECCCCEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCEEEEECCCCCCHHH
LESPYKGSFFGLLHTAGDVWVAYGLRGTAYRSTDAGTHWEKLDTGLPMAVGAGAALAGGG
HCCCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCCCHHHHCCCCCEEECCCCEECCCC
FVLMGQAGDALVGRDDGPALKRVPAREPVPVSGVAIAADGSLVLASLRGMRRLPALSVD
EEEEECCCCEEEECCCCCHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA