| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786044
Identifier: 91786044
GI number: 91786044
Start: 137725
End: 140151
Strand: Direct
Name: 91786044
Synonym: Bpro_0133
Alternate gene names: NA
Gene position: 137725-140151 (Clockwise)
Preceding gene: 91786043
Following gene: 91786045
Centisome position: 2.65
GC content: 63.25
Gene sequence:
>2427_bases ATGCACGCCGATTCCTCCTCCATCAACGCATCCAGCCAGCCTGTCGTCGCGCGGCTTGAAGATTTCGACACGCGCTCCGG CACGCTGCTCGAACGCGCTTTTTTTAACCACCGTCCCTGGGTCATGGCCCTGTGCCTGCTGCTGACCCTGGTGCTGGGCT GGCAGGCGACAAAACTGCAGTTGAACGCCAGCTTCGAGAAGACCATCCCGACCTCGCATCCCTACATCGTCAACTACCTG GCGCACAAGGGCGACCTGGCGGGCCAGGGCAACGCGCTGCGACTGGTGGTACAGGCCAAAAAGGGCACGATTTTCGACAA GCGCTATCTGGATGCGCTGCAGAAAATCAACGACGAAATTTTCCTGCTCCCCGGCGTGGACCGGCCTTTCATGAAGTCGC TGTGGACCTCCAACACCCGCTGGGTGGCGGTGACCGAAGAGGGCCTGGACGGCGGCCCGGTGATTCCTGACGTCTACGAC GGCTCCGCCGCCAGTCTTGCCGACCTGCGCGCCAATGTGGAACGCTCGGGCGAGATCGGGCAACTGGTGGCCGGCGATTT CAAATCCAGCATCGTGTTTGTGCCCCTGCTGGACCGCAACCCCGAGACCGGCAAGGCGCTGGACTACGGTGATCTGTCGC GCCAGATCGAAGTGCTGCGCGCCAGGTACGGCAGCGACACGCTGGAGATCGGTGTGACCGGTTTTGCCAAGGTAGTGGGC GACCTGATTGAAGGCCTGCAGCAGGTGTTGCTGTTCTTCCTGCTGGCTCTGGCGATCACCACCATGGTGCTGTTTGCCTA CACCCGCTGCGGCCGCAGCACGGCGCTGGTGGTGGCTTGTTCCCTGGTGGCAGTGGTCTGGCAGTTCGGCCTGCTGGCGC TGTTGGGTTATGAGCTTGATCCTTACTCGGTGCTGGTGCCCTTTCTGGTGTTTGCCATCGGCATGAGCCACGGTGCGCAG AAGATGAACGGCATCATGCAGGACATTGGCCGCGGCACGCACCGGGTGGTGGCGGCGCGCTATACCTTTCGCCGCCTCTT CATGGCCGGCCTGACGGCGCTGCTATGCGACGCGGTGGGCTTTGCCGTGCTGGTCATCATCCAGATCAAGGTAATCCAGG ACCTGGCCCTGATCGCCAGCATTGGCGTGGCCGTGCTGATCTTCACCAACCTGGTGTTGCTGCCGATTTTGCTGTCCTAC ACGGGCGTGGCCCCGTCGGCAGCGGCGCGCAGCCTGCGCGAAGAAACCGTGCAAGCGGGCGCCAGACGCCCCTGGCTGTG GGCCTTGCTGGACCACTTCACGCAAAAGCGCTGGGCCACGGCGGCCATCGTAGTCTCAGGCTTGATGGCGGCGGGCGGTT ATGCCGTCAGCGTGAACCTGAAGATTGGCGACCTGGATCCCGGTGCCTCCGAGCTGCGGGCCGACTCGCGCTACAACCGC GACAACGCCTACCAAATCTCGCACTACGCCGCCAGCGCCGACATCCTGACCGTGATGGTGACTACGCCGGTGGACCAGTG CACCAGCTACGGCACGCTGGCCAGGCTGGACAGCCTGGCCTGGGGCCTGGAGCAGTTGCCGGGCGTGGAGTCCACCAACT CCATGGCCGCGCTGTCCAGGCTGGCCATGGTGGGCTACAACGAAGGTAACTTCAAATGGTTTGAGCTGCTGCCCAACGAC GGCGCTCTGGGCGGCGTGCAAACCCGCGCCCCGCGTGAGCTGTTCAACCAGAACTGCTCCTTCCTGGCGTTGTACGTGTA CCTGAAGGACCACAAGGCCGAAACCCTGTCGCGGGTGGTGGCCGAGGTCGAGAAATTTGCCGCTGCCAACAACACGCCCG AGGTCACTTTCAAACTGGCCGCCGGCAGTGCCGGCATCGATGCAGCCACCAACATCGTGGTGGGCAAAGCCATGCAAGAG ATGCTGCTGTGGGTCTATGCGGCGGTGGTGGTCCTGTGCTGGATCACCTTTCGCTCCTGGCGTGCCGTGGTGGTGGCGGT GCTGCCGCTGGTGCTGACCTCCATCTTGTGCGAGGCGTTGATGGTGTGGCTGGGCATGGGCGTGAAGGTTGCCACCTTGC CGGTGATTGCACTGGGCGTGGGCATCGGCGTGGACTACGCGCTGTATGTGCTGAGCATTACCCTGGCCCGCATGCGGGAG GGCGCCAGCCTGTCAGACGCCTATCACCATGCGCTGCAGTTCACGGGTCGGGTTGTCATGCTCACGGGCATCACCCTGGC GCTGGCTGTTGGCACCTGGGCCTTTTCGCCCATCAAGTTCCAGGCCGACATGGGCATTTTGCTGGCCTTCATGTTCGTCT GGAACATGGTCGGGGCGCTGGTGCTGCTGCCTGCGTTGGGGCACTTTTTGCTGCGCAAACCAGTGGTGGCGGTGGTTGCG CCAGCCGCGATTTCTGTATCAATCTAA
Upstream 100 bases:
>100_bases GTGTCTGGTGTCGCCATCGCAGCCGATGGCAGCCTGGTGCTGGCCAGCCTGCGCGGCATGCGACGGCTGCCTGCCCTGTC TGTTGATTGAAGAAAATTTT
Downstream 100 bases:
>100_bases TCTTTAAATCCATGACGACATCTCCTGTTCGCACCACGCTGGACGCTACGCCTCTCGACCCCGCCTTTGCCGGTTTTCTG GCCCAAGCTGCGGCCCAGGG
Product: transporter
Products: NA
Alternate protein names: RND Superfamily Exporter; Patched Family Protein; Exporter Of RND Superfamily Protein; Inner Membrane Transporter; Transporter Protein; Exporter Of RND Superfamily; RND Family Multidrug Efflux Transporter; RND Superfamily Transporter; Exporters Of RND Superfamily; RND Family Transporter; RND Family Efflux Transporter
Number of amino acids: Translated: 808; Mature: 808
Protein sequence:
>808_residues MHADSSSINASSQPVVARLEDFDTRSGTLLERAFFNHRPWVMALCLLLTLVLGWQATKLQLNASFEKTIPTSHPYIVNYL AHKGDLAGQGNALRLVVQAKKGTIFDKRYLDALQKINDEIFLLPGVDRPFMKSLWTSNTRWVAVTEEGLDGGPVIPDVYD GSAASLADLRANVERSGEIGQLVAGDFKSSIVFVPLLDRNPETGKALDYGDLSRQIEVLRARYGSDTLEIGVTGFAKVVG DLIEGLQQVLLFFLLALAITTMVLFAYTRCGRSTALVVACSLVAVVWQFGLLALLGYELDPYSVLVPFLVFAIGMSHGAQ KMNGIMQDIGRGTHRVVAARYTFRRLFMAGLTALLCDAVGFAVLVIIQIKVIQDLALIASIGVAVLIFTNLVLLPILLSY TGVAPSAAARSLREETVQAGARRPWLWALLDHFTQKRWATAAIVVSGLMAAGGYAVSVNLKIGDLDPGASELRADSRYNR DNAYQISHYAASADILTVMVTTPVDQCTSYGTLARLDSLAWGLEQLPGVESTNSMAALSRLAMVGYNEGNFKWFELLPND GALGGVQTRAPRELFNQNCSFLALYVYLKDHKAETLSRVVAEVEKFAAANNTPEVTFKLAAGSAGIDAATNIVVGKAMQE MLLWVYAAVVVLCWITFRSWRAVVVAVLPLVLTSILCEALMVWLGMGVKVATLPVIALGVGIGVDYALYVLSITLARMRE GASLSDAYHHALQFTGRVVMLTGITLALAVGTWAFSPIKFQADMGILLAFMFVWNMVGALVLLPALGHFLLRKPVVAVVA PAAISVSI
Sequences:
>Translated_808_residues MHADSSSINASSQPVVARLEDFDTRSGTLLERAFFNHRPWVMALCLLLTLVLGWQATKLQLNASFEKTIPTSHPYIVNYL AHKGDLAGQGNALRLVVQAKKGTIFDKRYLDALQKINDEIFLLPGVDRPFMKSLWTSNTRWVAVTEEGLDGGPVIPDVYD GSAASLADLRANVERSGEIGQLVAGDFKSSIVFVPLLDRNPETGKALDYGDLSRQIEVLRARYGSDTLEIGVTGFAKVVG DLIEGLQQVLLFFLLALAITTMVLFAYTRCGRSTALVVACSLVAVVWQFGLLALLGYELDPYSVLVPFLVFAIGMSHGAQ KMNGIMQDIGRGTHRVVAARYTFRRLFMAGLTALLCDAVGFAVLVIIQIKVIQDLALIASIGVAVLIFTNLVLLPILLSY TGVAPSAAARSLREETVQAGARRPWLWALLDHFTQKRWATAAIVVSGLMAAGGYAVSVNLKIGDLDPGASELRADSRYNR DNAYQISHYAASADILTVMVTTPVDQCTSYGTLARLDSLAWGLEQLPGVESTNSMAALSRLAMVGYNEGNFKWFELLPND GALGGVQTRAPRELFNQNCSFLALYVYLKDHKAETLSRVVAEVEKFAAANNTPEVTFKLAAGSAGIDAATNIVVGKAMQE MLLWVYAAVVVLCWITFRSWRAVVVAVLPLVLTSILCEALMVWLGMGVKVATLPVIALGVGIGVDYALYVLSITLARMRE GASLSDAYHHALQFTGRVVMLTGITLALAVGTWAFSPIKFQADMGILLAFMFVWNMVGALVLLPALGHFLLRKPVVAVVA PAAISVSI >Mature_808_residues MHADSSSINASSQPVVARLEDFDTRSGTLLERAFFNHRPWVMALCLLLTLVLGWQATKLQLNASFEKTIPTSHPYIVNYL AHKGDLAGQGNALRLVVQAKKGTIFDKRYLDALQKINDEIFLLPGVDRPFMKSLWTSNTRWVAVTEEGLDGGPVIPDVYD GSAASLADLRANVERSGEIGQLVAGDFKSSIVFVPLLDRNPETGKALDYGDLSRQIEVLRARYGSDTLEIGVTGFAKVVG DLIEGLQQVLLFFLLALAITTMVLFAYTRCGRSTALVVACSLVAVVWQFGLLALLGYELDPYSVLVPFLVFAIGMSHGAQ KMNGIMQDIGRGTHRVVAARYTFRRLFMAGLTALLCDAVGFAVLVIIQIKVIQDLALIASIGVAVLIFTNLVLLPILLSY TGVAPSAAARSLREETVQAGARRPWLWALLDHFTQKRWATAAIVVSGLMAAGGYAVSVNLKIGDLDPGASELRADSRYNR DNAYQISHYAASADILTVMVTTPVDQCTSYGTLARLDSLAWGLEQLPGVESTNSMAALSRLAMVGYNEGNFKWFELLPND GALGGVQTRAPRELFNQNCSFLALYVYLKDHKAETLSRVVAEVEKFAAANNTPEVTFKLAAGSAGIDAATNIVVGKAMQE MLLWVYAAVVVLCWITFRSWRAVVVAVLPLVLTSILCEALMVWLGMGVKVATLPVIALGVGIGVDYALYVLSITLARMRE GASLSDAYHHALQFTGRVVMLTGITLALAVGTWAFSPIKFQADMGILLAFMFVWNMVGALVLLPALGHFLLRKPVVAVVA PAAISVSI
Specific function: Unknown
COG id: COG1033
COG function: function code R; Predicted exporters of the RND superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87440; Mature: 87440
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHADSSSINASSQPVVARLEDFDTRSGTLLERAFFNHRPWVMALCLLLTLVLGWQATKLQ CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEE LNASFEKTIPTSHPYIVNYLAHKGDLAGQGNALRLVVQAKKGTIFDKRYLDALQKINDEI EECCHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCE FLLPGVDRPFMKSLWTSNTRWVAVTEEGLDGGPVIPDVYDGSAASLADLRANVERSGEIG EEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCH QLVAGDFKSSIVFVPLLDRNPETGKALDYGDLSRQIEVLRARYGSDTLEIGVTGFAKVVG HHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHH DLIEGLQQVLLFFLLALAITTMVLFAYTRCGRSTALVVACSLVAVVWQFGLLALLGYELD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PYSVLVPFLVFAIGMSHGAQKMNGIMQDIGRGTHRVVAARYTFRRLFMAGLTALLCDAVG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVLVIIQIKVIQDLALIASIGVAVLIFTNLVLLPILLSYTGVAPSAAARSLREETVQAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC ARRPWLWALLDHFTQKRWATAAIVVSGLMAAGGYAVSVNLKIGDLDPGASELRADSRYNR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHCCCCCCC DNAYQISHYAASADILTVMVTTPVDQCTSYGTLARLDSLAWGLEQLPGVESTNSMAALSR CCCEEEHHHHCCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LAMVGYNEGNFKWFELLPNDGALGGVQTRAPRELFNQNCSFLALYVYLKDHKAETLSRVV HHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEEEEHHHHHHHHHHHHH AEVEKFAAANNTPEVTFKLAAGSAGIDAATNIVVGKAMQEMLLWVYAAVVVLCWITFRSW HHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVVVAVLPLVLTSILCEALMVWLGMGVKVATLPVIALGVGIGVDYALYVLSITLARMRE HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC GASLSDAYHHALQFTGRVVMLTGITLALAVGTWAFSPIKFQADMGILLAFMFVWNMVGAL CCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHH VLLPALGHFLLRKPVVAVVAPAAISVSI HHHHHHHHHHHHCCHHHHEECCEEEECC >Mature Secondary Structure MHADSSSINASSQPVVARLEDFDTRSGTLLERAFFNHRPWVMALCLLLTLVLGWQATKLQ CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEE LNASFEKTIPTSHPYIVNYLAHKGDLAGQGNALRLVVQAKKGTIFDKRYLDALQKINDEI EECCHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCE FLLPGVDRPFMKSLWTSNTRWVAVTEEGLDGGPVIPDVYDGSAASLADLRANVERSGEIG EEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCH QLVAGDFKSSIVFVPLLDRNPETGKALDYGDLSRQIEVLRARYGSDTLEIGVTGFAKVVG HHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHH DLIEGLQQVLLFFLLALAITTMVLFAYTRCGRSTALVVACSLVAVVWQFGLLALLGYELD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PYSVLVPFLVFAIGMSHGAQKMNGIMQDIGRGTHRVVAARYTFRRLFMAGLTALLCDAVG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVLVIIQIKVIQDLALIASIGVAVLIFTNLVLLPILLSYTGVAPSAAARSLREETVQAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC ARRPWLWALLDHFTQKRWATAAIVVSGLMAAGGYAVSVNLKIGDLDPGASELRADSRYNR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHCCCCCCC DNAYQISHYAASADILTVMVTTPVDQCTSYGTLARLDSLAWGLEQLPGVESTNSMAALSR CCCEEEHHHHCCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LAMVGYNEGNFKWFELLPNDGALGGVQTRAPRELFNQNCSFLALYVYLKDHKAETLSRVV HHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEEEEHHHHHHHHHHHHH AEVEKFAAANNTPEVTFKLAAGSAGIDAATNIVVGKAMQEMLLWVYAAVVVLCWITFRSW HHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAVVVAVLPLVLTSILCEALMVWLGMGVKVATLPVIALGVGIGVDYALYVLSITLARMRE HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC GASLSDAYHHALQFTGRVVMLTGITLALAVGTWAFSPIKFQADMGILLAFMFVWNMVGAL CCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHH VLLPALGHFLLRKPVVAVVAPAAISVSI HHHHHHHHHHHHCCHHHHEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA