Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ybaY [H]

Identifier: 91786032

GI number: 91786032

Start: 124003

End: 124452

Strand: Direct

Name: ybaY [H]

Synonym: Bpro_0121

Alternate gene names: 91786032

Gene position: 124003-124452 (Clockwise)

Preceding gene: 91786031

Following gene: 91786034

Centisome position: 2.38

GC content: 66.0

Gene sequence:

>450_bases
ATGAATCGACGAATGATGGGGGCGGCCGCCCTCGCTGTCCTTGGCCTGCTCACTGCATGCGCGACCGGACCCGCCTCCGC
TCCCCCGGCCGACGTGCCAGCAGCATCTGCCACCTCCGGGCTGCGTGTGACCGGCACCGTGTCCTACCTGCAGCGCGTGG
CCTTGCCGCCCGACAGCGACGTCATTGTCCAGCTGCGTGACATCTCGCGACTCGACTCGCCATCGGGCGTGTTGGCCGAG
CAGCGTTTCACGCCCCGCAGCCAGGTGCCCTTGCCGTTCGAACTCAGCGTGGATCCGGGCCGGATAGACCCGCGCATGCG
CTACGCCGTGGCAGCGCGCATTCAGCGCAACGGCAAATTGCTGTTCATCAACGACAAGCTGCACCTGGTGCTCACGCAAG
GCCATGGCAACCGTGTCGACATGGTGCTGCACATGGTGTCCAAACCCTGA

Upstream 100 bases:

>100_bases
AACCGATCGAGAAGGTGGTGAACCGGGACGCGATGGCCAACCCGGATTGCCTCGCATGGTATGTTCAGTTCTCGCAAAAC
TACCTTGCCGAAAGGGGCGC

Downstream 100 bases:

>100_bases
AACCCTGAAACGCTCAGGCCGCCGCCGGCTGACGATTCACCAGCACGACACCGACGGCCACCAGCGCCAGCGCCGCCAGC
AGGCCGGGCGTCACACTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNRRMMGAAALAVLGLLTACATGPASAPPADVPAASATSGLRVTGTVSYLQRVALPPDSDVIVQLRDISRLDSPSGVLAE
QRFTPRSQVPLPFELSVDPGRIDPRMRYAVAARIQRNGKLLFINDKLHLVLTQGHGNRVDMVLHMVSKP

Sequences:

>Translated_149_residues
MNRRMMGAAALAVLGLLTACATGPASAPPADVPAASATSGLRVTGTVSYLQRVALPPDSDVIVQLRDISRLDSPSGVLAE
QRFTPRSQVPLPFELSVDPGRIDPRMRYAVAARIQRNGKLLFINDKLHLVLTQGHGNRVDMVLHMVSKP
>Mature_149_residues
MNRRMMGAAALAVLGLLTACATGPASAPPADVPAASATSGLRVTGTVSYLQRVALPPDSDVIVQLRDISRLDSPSGVLAE
QRFTPRSQVPLPFELSVDPGRIDPRMRYAVAARIQRNGKLLFINDKLHLVLTQGHGNRVDMVLHMVSKP

Specific function: Unknown

COG id: COG3126

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786658, Length=103, Percent_Identity=42.7184466019417, Blast_Score=77, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15975; Mature: 15975

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRMMGAAALAVLGLLTACATGPASAPPADVPAASATSGLRVTGTVSYLQRVALPPDSD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCC
VIVQLRDISRLDSPSGVLAEQRFTPRSQVPLPFELSVDPGRIDPRMRYAVAARIQRNGKL
EEEEEECHHCCCCCCCCEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCE
LFINDKLHLVLTQGHGNRVDMVLHMVSKP
EEECCCEEEEEECCCCCCHHHEEEECCCC
>Mature Secondary Structure
MNRRMMGAAALAVLGLLTACATGPASAPPADVPAASATSGLRVTGTVSYLQRVALPPDSD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCC
VIVQLRDISRLDSPSGVLAEQRFTPRSQVPLPFELSVDPGRIDPRMRYAVAARIQRNGKL
EEEEEECHHCCCCCCCCEECCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCE
LFINDKLHLVLTQGHGNRVDMVLHMVSKP
EEECCCEEEEEECCCCCCHHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]