| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is acsA1 [H]
Identifier: 91786031
GI number: 91786031
Start: 121916
End: 124006
Strand: Direct
Name: acsA1 [H]
Synonym: Bpro_0120
Alternate gene names: 91786031
Gene position: 121916-124006 (Clockwise)
Preceding gene: 91786027
Following gene: 91786032
Centisome position: 2.34
GC content: 62.55
Gene sequence:
>2091_bases ATGAGCGCACCCTTTACTCCCCAAATACGCCTCTACCAGGACTGGTTGAAGGCCACGCGCGGCCTGTCCTTTGACAGCTA TGACGCACTGTGGCGTTGGTCGGTGACCGACCTGGAGGCCTTCTGGCAAAGCATCTGGGACTATTTTGAGTTGCAATCGC CGACGCCGCACACAGCGGTGCTGGCCGACCGGCGCATGCCTGGTGCCCGGTGGTTTCCGGGCGCCCAGGTCAACTATGCG CGGCAGGTCCTGCGGCACGTGGACAAGGCCCACGCCGCAGGTTTCCCCGCGCTTGTCAACCACAACGAAAAAAGCCTTGC CAGCGGCCAGCACCGCGAACTGAGCTGGCCTGCTCTGCGCCAGCAGGTCGCGTCACTGGCACTGCACCTGAAGGCCCAAG GTGTGGAGCCGGGCGACCGCGTGGCCGCCTATTTACCCAACATTCCCGAGGCCATGGTGGCTTTCCTGGCCGTGGTCAGC ATAGGCGGCGTCTGGAGCATTTGCGCGCCCGACATGGGCACCCACGCCGTGCTGGACCGCTTCAAACAGATCGAACCCAA GGTGCTGATTGCCTGTGACGGCGTGCGCTATGGCGGGCGCGATTTTGACCGCACGGCTGTGCTGGCGGAGCTGCGCGCCG CGCTGCCCAGCCTGCAGCATGTGATCGTTCATGAGAATCTTGGCAGCACAAATTCAATAGCCGACAGCACCCTTCTCGAA AGCGCGACGGCCCGAAATGATGCGCAAACTGCGGCGTTTGAACCGCTCTGGCTGCCGTTTGACCATCCGCTGTGGATTGT CTATTCCAGCGGCACCACCGGCCTGCCCAAGCCCATCGTGCATGGCCACGGCGGCACGCAACTGGTAGCGCTGGCGTTGA AGACCCTGCACAACGACATCGGTTGCAGCTACGAGGCCAACAGCTGGGGCGAGCGCTACCACTGGTACAGCTCCACCGGC TGGGTGATGTGGAACGCGCAGCTGAGCGGCCTGCTCAACGGCACCACCTGCTGCCTGTTTGACGGCAACCCCGGCGGCAG CAAGGACAAACCCGACTGGACCACGCTCTGGCGCTTTGCGGCCGACCTTGACGTGACGTTTTTCGGCGCCGGTGCCGCCT TCTTTGCCAATTGCATGAAGGCGGGGGTTGAGCTGGCGGAATGCGGCGATCTGACAAGGATAAGGGCACTCGGCAGCACC GGTTCGCCGCTGAGCGAAGACACGCAGCGATGGGGGACGCAGCAATTCCGCAAGCTCCATGCCGTTCGCTCTGAGCCTGT CAAAGAGCCCTTCGACCTTGCTCAGGACCGGCTTCGACAAGCTCAGCCCGAACGGGAAGATATCTGGTGGTGCAACATCT CCGGCGGAACGGACTTCGCCGGCGCTTTCATCGGCGGCAACCGCGAATTGCCGCTGGTCCCCGGCGAGATGCAGTGCCGC CTGCTCGGCTGCGCGGTCGAGGCCTGGAACGAGCAGGGCCAACCTGTCATCAATGAAGTGGGCGAATTGGTCTGTACGCA GCCCCTGCCGTCCATGCCTCTGTACTTCGTCGGCGATGAGGGCAACCAGCGCTACCTCTCCAGCTACTTCGACATATACC CCAATGTCTGGCGGCATGGCGACTGGCTCAAGATTGGCGCCAACGGCGGTTGCGTGATATACGGCCGCAGCGATGCCACC ATCAACCGCCACGGCCTGCGCATGGGCACCAGCGAGCTGTACAGCGCGATAGAGGCGCTGCCCGAGGTGCTGGACTCGAT GGTGGTGGACCTGGAGTATCTGGGCCGCGAAAGCTACATGCCGCTGTTTGTGGTGCTGCGCGAGGGTGTCGCGCTCGACG ACGCCCTGAAAGCCCGTTTGAATGGTGCGATCAAAACCGCGTTGTCGCCGCGCTTTGTACCCGATGCCATTTTTCAGGTG CCCGAAATACCGCGCACTCTGTCGGGCAAAAAACAGGAGCTGCCAATCAAGAAACTGTTGCTGGGGCAACCGATCGAGAA GGTGGTGAACCGGGACGCGATGGCCAACCCGGATTGCCTCGCATGGTATGTTCAGTTCTCGCAAAACTACCTTGCCGAAA GGGGCGCATGA
Upstream 100 bases:
>100_bases TGCGGCGAATATTAGCACGATTGTGCGAAATTGCAAATCACGCACTTCATGAGGCGTGCTGACCCTTCTCACGTCAAGGT CGTGGCGTTAAGCTTGCACC
Downstream 100 bases:
>100_bases ATCGACGAATGATGGGGGCGGCCGCCCTCGCTGTCCTTGGCCTGCTCACTGCATGCGCGACCGGACCCGCCTCCGCTCCC CCGGCCGACGTGCCAGCAGC
Product: acetoacetyl-CoA synthetase
Products: NA
Alternate protein names: Acetoacetate--CoA ligase 1; Acyl-activating enzyme 1 [H]
Number of amino acids: Translated: 696; Mature: 695
Protein sequence:
>696_residues MSAPFTPQIRLYQDWLKATRGLSFDSYDALWRWSVTDLEAFWQSIWDYFELQSPTPHTAVLADRRMPGARWFPGAQVNYA RQVLRHVDKAHAAGFPALVNHNEKSLASGQHRELSWPALRQQVASLALHLKAQGVEPGDRVAAYLPNIPEAMVAFLAVVS IGGVWSICAPDMGTHAVLDRFKQIEPKVLIACDGVRYGGRDFDRTAVLAELRAALPSLQHVIVHENLGSTNSIADSTLLE SATARNDAQTAAFEPLWLPFDHPLWIVYSSGTTGLPKPIVHGHGGTQLVALALKTLHNDIGCSYEANSWGERYHWYSSTG WVMWNAQLSGLLNGTTCCLFDGNPGGSKDKPDWTTLWRFAADLDVTFFGAGAAFFANCMKAGVELAECGDLTRIRALGST GSPLSEDTQRWGTQQFRKLHAVRSEPVKEPFDLAQDRLRQAQPEREDIWWCNISGGTDFAGAFIGGNRELPLVPGEMQCR LLGCAVEAWNEQGQPVINEVGELVCTQPLPSMPLYFVGDEGNQRYLSSYFDIYPNVWRHGDWLKIGANGGCVIYGRSDAT INRHGLRMGTSELYSAIEALPEVLDSMVVDLEYLGRESYMPLFVVLREGVALDDALKARLNGAIKTALSPRFVPDAIFQV PEIPRTLSGKKQELPIKKLLLGQPIEKVVNRDAMANPDCLAWYVQFSQNYLAERGA
Sequences:
>Translated_696_residues MSAPFTPQIRLYQDWLKATRGLSFDSYDALWRWSVTDLEAFWQSIWDYFELQSPTPHTAVLADRRMPGARWFPGAQVNYA RQVLRHVDKAHAAGFPALVNHNEKSLASGQHRELSWPALRQQVASLALHLKAQGVEPGDRVAAYLPNIPEAMVAFLAVVS IGGVWSICAPDMGTHAVLDRFKQIEPKVLIACDGVRYGGRDFDRTAVLAELRAALPSLQHVIVHENLGSTNSIADSTLLE SATARNDAQTAAFEPLWLPFDHPLWIVYSSGTTGLPKPIVHGHGGTQLVALALKTLHNDIGCSYEANSWGERYHWYSSTG WVMWNAQLSGLLNGTTCCLFDGNPGGSKDKPDWTTLWRFAADLDVTFFGAGAAFFANCMKAGVELAECGDLTRIRALGST GSPLSEDTQRWGTQQFRKLHAVRSEPVKEPFDLAQDRLRQAQPEREDIWWCNISGGTDFAGAFIGGNRELPLVPGEMQCR LLGCAVEAWNEQGQPVINEVGELVCTQPLPSMPLYFVGDEGNQRYLSSYFDIYPNVWRHGDWLKIGANGGCVIYGRSDAT INRHGLRMGTSELYSAIEALPEVLDSMVVDLEYLGRESYMPLFVVLREGVALDDALKARLNGAIKTALSPRFVPDAIFQV PEIPRTLSGKKQELPIKKLLLGQPIEKVVNRDAMANPDCLAWYVQFSQNYLAERGA >Mature_695_residues SAPFTPQIRLYQDWLKATRGLSFDSYDALWRWSVTDLEAFWQSIWDYFELQSPTPHTAVLADRRMPGARWFPGAQVNYAR QVLRHVDKAHAAGFPALVNHNEKSLASGQHRELSWPALRQQVASLALHLKAQGVEPGDRVAAYLPNIPEAMVAFLAVVSI GGVWSICAPDMGTHAVLDRFKQIEPKVLIACDGVRYGGRDFDRTAVLAELRAALPSLQHVIVHENLGSTNSIADSTLLES ATARNDAQTAAFEPLWLPFDHPLWIVYSSGTTGLPKPIVHGHGGTQLVALALKTLHNDIGCSYEANSWGERYHWYSSTGW VMWNAQLSGLLNGTTCCLFDGNPGGSKDKPDWTTLWRFAADLDVTFFGAGAAFFANCMKAGVELAECGDLTRIRALGSTG SPLSEDTQRWGTQQFRKLHAVRSEPVKEPFDLAQDRLRQAQPEREDIWWCNISGGTDFAGAFIGGNRELPLVPGEMQCRL LGCAVEAWNEQGQPVINEVGELVCTQPLPSMPLYFVGDEGNQRYLSSYFDIYPNVWRHGDWLKIGANGGCVIYGRSDATI NRHGLRMGTSELYSAIEALPEVLDSMVVDLEYLGRESYMPLFVVLREGVALDDALKARLNGAIKTALSPRFVPDAIFQVP EIPRTLSGKKQELPIKKLLLGQPIEKVVNRDAMANPDCLAWYVQFSQNYLAERGA
Specific function: Involved in poly-3-hydroxybutyrate degradation. Activates acetoacetate to acetoacetyl-CoA [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI31982927, Length=686, Percent_Identity=34.2565597667638, Blast_Score=391, Evalue=1e-108, Organism=Homo sapiens, GI28416953, Length=677, Percent_Identity=26.4401772525849, Blast_Score=179, Evalue=9e-45, Organism=Homo sapiens, GI8923896, Length=699, Percent_Identity=25.7510729613734, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI253970489, Length=712, Percent_Identity=25.2808988764045, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI13375727, Length=657, Percent_Identity=25.5707762557078, Blast_Score=140, Evalue=4e-33, Organism=Escherichia coli, GI1790505, Length=684, Percent_Identity=25.1461988304094, Blast_Score=159, Evalue=6e-40, Organism=Escherichia coli, GI1786529, Length=652, Percent_Identity=25.4601226993865, Blast_Score=141, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17569507, Length=678, Percent_Identity=30.8259587020649, Blast_Score=341, Evalue=1e-93, Organism=Caenorhabditis elegans, GI71982997, Length=674, Percent_Identity=23.8872403560831, Blast_Score=142, Evalue=8e-34, Organism=Caenorhabditis elegans, GI71983001, Length=674, Percent_Identity=23.8872403560831, Blast_Score=142, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6319264, Length=631, Percent_Identity=24.8811410459588, Blast_Score=154, Evalue=7e-38, Organism=Saccharomyces cerevisiae, GI6323182, Length=689, Percent_Identity=23.6574746008708, Blast_Score=150, Evalue=9e-37, Organism=Drosophila melanogaster, GI24667955, Length=663, Percent_Identity=24.4343891402715, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI62472339, Length=568, Percent_Identity=25.5281690140845, Blast_Score=152, Evalue=1e-36, Organism=Drosophila melanogaster, GI24667959, Length=535, Percent_Identity=24.4859813084112, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI21355225, Length=654, Percent_Identity=23.7003058103976, Blast_Score=124, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005914 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.16 [H]
Molecular weight: Translated: 77115; Mature: 76984
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPFTPQIRLYQDWLKATRGLSFDSYDALWRWSVTDLEAFWQSIWDYFELQSPTPHTAV CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCEE LADRRMPGARWFPGAQVNYARQVLRHVDKAHAAGFPALVNHNEKSLASGQHRELSWPALR EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCHHHH QQVASLALHLKAQGVEPGDRVAAYLPNIPEAMVAFLAVVSIGGVWSICAPDMGTHAVLDR HHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHH FKQIEPKVLIACDGVRYGGRDFDRTAVLAELRAALPSLQHVIVHENLGSTNSIADSTLLE HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHH SATARNDAQTAAFEPLWLPFDHPLWIVYSSGTTGLPKPIVHGHGGTQLVALALKTLHNDI HHHCCCCCHHHCCCCEECCCCCCEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHH GCSYEANSWGERYHWYSSTGWVMWNAQLSGLLNGTTCCLFDGNPGGSKDKPDWTTLWRFA CCCCCCCCCCCCEEEECCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH ADLDVTFFGAGAAFFANCMKAGVELAECGDLTRIRALGSTGSPLSEDTQRWGTQQFRKLH HCCCEEEECCCHHHHHHHHHHCCCHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AVRSEPVKEPFDLAQDRLRQAQPEREDIWWCNISGGTDFAGAFIGGNRELPLVPGEMQCR HHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCHHHEE LLGCAVEAWNEQGQPVINEVGELVCTQPLPSMPLYFVGDEGNQRYLSSYFDIYPNVWRHG EHHHHHHHHCCCCCHHHHHHHHHEECCCCCCCCEEEECCCCCHHHHHHHHHHCCHHHCCC DWLKIGANGGCVIYGRSDATINRHGLRMGTSELYSAIEALPEVLDSMVVDLEYLGRESYM CEEEECCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLFVVLREGVALDDALKARLNGAIKTALSPRFVPDAIFQVPEIPRTLSGKKQELPIKKLL HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHCCCCCCCCHHHHH LGQPIEKVVNRDAMANPDCLAWYVQFSQNYLAERGA HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAPFTPQIRLYQDWLKATRGLSFDSYDALWRWSVTDLEAFWQSIWDYFELQSPTPHTAV CCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCEE LADRRMPGARWFPGAQVNYARQVLRHVDKAHAAGFPALVNHNEKSLASGQHRELSWPALR EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCHHHH QQVASLALHLKAQGVEPGDRVAAYLPNIPEAMVAFLAVVSIGGVWSICAPDMGTHAVLDR HHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHH FKQIEPKVLIACDGVRYGGRDFDRTAVLAELRAALPSLQHVIVHENLGSTNSIADSTLLE HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHH SATARNDAQTAAFEPLWLPFDHPLWIVYSSGTTGLPKPIVHGHGGTQLVALALKTLHNDI HHHCCCCCHHHCCCCEECCCCCCEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHH GCSYEANSWGERYHWYSSTGWVMWNAQLSGLLNGTTCCLFDGNPGGSKDKPDWTTLWRFA CCCCCCCCCCCCEEEECCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH ADLDVTFFGAGAAFFANCMKAGVELAECGDLTRIRALGSTGSPLSEDTQRWGTQQFRKLH HCCCEEEECCCHHHHHHHHHHCCCHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AVRSEPVKEPFDLAQDRLRQAQPEREDIWWCNISGGTDFAGAFIGGNRELPLVPGEMQCR HHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCHHHEE LLGCAVEAWNEQGQPVINEVGELVCTQPLPSMPLYFVGDEGNQRYLSSYFDIYPNVWRHG EHHHHHHHHCCCCCHHHHHHHHHEECCCCCCCCEEEECCCCCHHHHHHHHHHCCHHHCCC DWLKIGANGGCVIYGRSDATINRHGLRMGTSELYSAIEALPEVLDSMVVDLEYLGRESYM CEEEECCCCCEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLFVVLREGVALDDALKARLNGAIKTALSPRFVPDAIFQVPEIPRTLSGKKQELPIKKLL HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHCCCCCCCCHHHHH LGQPIEKVVNRDAMANPDCLAWYVQFSQNYLAERGA HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10735852; 11481430 [H]