| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786027
Identifier: 91786027
GI number: 91786027
Start: 118008
End: 118400
Strand: Direct
Name: 91786027
Synonym: Bpro_0116
Alternate gene names: NA
Gene position: 118008-118400 (Clockwise)
Preceding gene: 91786026
Following gene: 91786031
Centisome position: 2.27
GC content: 62.85
Gene sequence:
>393_bases ATGTCCCCAAAGCAGTCCGCCTCTCCCCTTTCCACTCCGCTTGCGCGCGCGCTGGATCAGAATGACACGGCGAAAGAGAC GATGGAGCAGGCGGCCGATGAACTGATGGTGATCAACACCGTACTCAAACAGGAAATTCCCGACCCCTTGCAAACCGGCG AAGTCGCACAGGCCCTGCGAAAAACTGACGAAATCGAACGCAGGATTCAGGAGTCCGCCGACGAGCTGGCGCAGGTTCAC CAGGTCCTGGCGCAGGAAATCGGCGCACGCGTCGACCTGGAGCGCGAGTTGGTGGCGACCAAAATTGCCCTGGCCCAAGC CAGAGGTCAGCGCCTGCACGAAGTGGAGCCCTGCTCGACAGGTGGTCAGGGCGGCAGCCCGCGGCCCCGCTAG
Upstream 100 bases:
>100_bases GTAAAGTTTTAAGTCGATAAATCTCCAGCTTTGCGGCAATCCGCTATTCGGGCAATCCCCCGGTGTCGATGTCCTTGCAA CCTGACCCAAGGTCCTGACC
Downstream 100 bases:
>100_bases TACTCCGACCCAGAAATATCGAAACATGAAGGCGCGCCTTCGAACCCATGCCGTCGCTGCAAATCCTCGCCATAGCTACA GCTATGTCTGCGGTTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSPKQSASPLSTPLARALDQNDTAKETMEQAADELMVINTVLKQEIPDPLQTGEVAQALRKTDEIERRIQESADELAQVH QVLAQEIGARVDLERELVATKIALAQARGQRLHEVEPCSTGGQGGSPRPR
Sequences:
>Translated_130_residues MSPKQSASPLSTPLARALDQNDTAKETMEQAADELMVINTVLKQEIPDPLQTGEVAQALRKTDEIERRIQESADELAQVH QVLAQEIGARVDLERELVATKIALAQARGQRLHEVEPCSTGGQGGSPRPR >Mature_129_residues SPKQSASPLSTPLARALDQNDTAKETMEQAADELMVINTVLKQEIPDPLQTGEVAQALRKTDEIERRIQESADELAQVHQ VLAQEIGARVDLERELVATKIALAQARGQRLHEVEPCSTGGQGGSPRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14174; Mature: 14043
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKQSASPLSTPLARALDQNDTAKETMEQAADELMVINTVLKQEIPDPLQTGEVAQALR CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH KTDEIERRIQESADELAQVHQVLAQEIGARVDLERELVATKIALAQARGQRLHEVEPCST HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGQGGSPRPR CCCCCCCCCC >Mature Secondary Structure SPKQSASPLSTPLARALDQNDTAKETMEQAADELMVINTVLKQEIPDPLQTGEVAQALR CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH KTDEIERRIQESADELAQVHQVLAQEIGARVDLERELVATKIALAQARGQRLHEVEPCST HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGQGGSPRPR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA