| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786016
Identifier: 91786016
GI number: 91786016
Start: 107306
End: 107728
Strand: Reverse
Name: 91786016
Synonym: Bpro_0104
Alternate gene names: NA
Gene position: 107728-107306 (Counterclockwise)
Preceding gene: 91786017
Following gene: 91786015
Centisome position: 2.07
GC content: 60.52
Gene sequence:
>423_bases ATGAGCATGCCACGACACCGCCCCATGAAGATTAGCTTTCGCCGTGTGGCGATCCTGTCCGCACTCATTTTCTTTGCCCT GGCACTCACCTGGATGCTCGCGCCGGGTGTACTGCTGTCCAGTTGGGGCGTTGATCTTACAAGCCAGGCTGGCTTGGTGG GTCGCCGGGGGGCGCCTCTGTATGCGGGGATCGGCGTCATGTTCCTCAGCGCAAGGAATGCGGAGCCATCGCCAGCCCGC TCGGCCTTGCTAAGCGGTGCTGTCGTCACTTGCCTGCTGCTCGCAGTTCTTGGCACCTCTGAGCTCGTCAACGGCCATGC CGGGCCCGGCATCTTGGTGGCCGTTGCAATCGAGATCGTGCTCGCCATGACGTTCTTGCATGTCGCAATTACAAGGAAAT CCACCAGGCAATCCAGCCATTGA
Upstream 100 bases:
>100_bases CGCGAACCACACATCTGGTTGGCCTTGCCGAAGTGCCCGCGGTCATTGAGCGATTGTTCGAGGGAAAAGTCCAGGGCCGT ACCGTCGTTGACGTCAACGC
Downstream 100 bases:
>100_bases GAAAGGAACACACATGCCATCAATCACCCTCAAGCCACTGACCGCCGGCCAAGCAGCTTCAACCGTTGGAGCCATGGCAA TACTTCGTTTGAAACAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSMPRHRPMKISFRRVAILSALIFFALALTWMLAPGVLLSSWGVDLTSQAGLVGRRGAPLYAGIGVMFLSARNAEPSPAR SALLSGAVVTCLLLAVLGTSELVNGHAGPGILVAVAIEIVLAMTFLHVAITRKSTRQSSH
Sequences:
>Translated_140_residues MSMPRHRPMKISFRRVAILSALIFFALALTWMLAPGVLLSSWGVDLTSQAGLVGRRGAPLYAGIGVMFLSARNAEPSPAR SALLSGAVVTCLLLAVLGTSELVNGHAGPGILVAVAIEIVLAMTFLHVAITRKSTRQSSH >Mature_139_residues SMPRHRPMKISFRRVAILSALIFFALALTWMLAPGVLLSSWGVDLTSQAGLVGRRGAPLYAGIGVMFLSARNAEPSPARS ALLSGAVVTCLLLAVLGTSELVNGHAGPGILVAVAIEIVLAMTFLHVAITRKSTRQSSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14746; Mature: 14615
Theoretical pI: Translated: 12.15; Mature: 12.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPRHRPMKISFRRVAILSALIFFALALTWMLAPGVLLSSWGVDLTSQAGLVGRRGAPL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCH YAGIGVMFLSARNAEPSPARSALLSGAVVTCLLLAVLGTSELVNGHAGPGILVAVAIEIV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LAMTFLHVAITRKSTRQSSH HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SMPRHRPMKISFRRVAILSALIFFALALTWMLAPGVLLSSWGVDLTSQAGLVGRRGAPL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCH YAGIGVMFLSARNAEPSPARSALLSGAVVTCLLLAVLGTSELVNGHAGPGILVAVAIEIV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LAMTFLHVAITRKSTRQSSH HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA