| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786015
Identifier: 91786015
GI number: 91786015
Start: 106768
End: 107292
Strand: Reverse
Name: 91786015
Synonym: Bpro_0103
Alternate gene names: NA
Gene position: 107292-106768 (Counterclockwise)
Preceding gene: 91786016
Following gene: 91786014
Centisome position: 2.06
GC content: 61.71
Gene sequence:
>525_bases ATGCCATCAATCACCCTCAAGCCACTGACCGCCGGCCAAGCAGCTTCAACCGTTGGAGCCATGGCAATACTTCGTTTGAA ACAAACGGGCTCCGTCGGCCTTATCCTGGCCGCGGCGCTGATGGCGCCGCCGGTCCGGGCGGACGATGCCTCGCCCGCGG GCCTGTGGAGGAACGTTGACGACGTCAGCGGCAAGCCACGGGCGCTGATCCGCATCACCGAATCGAATGAAACCCTGCAG GGCAGAATCGAAAAAGTGTTTCCCGGCCCGACCGAGGATCCGAATCCGAAGTGCGACAAATGCCAGGGCGCGAACAAGGA TGCACCGGTCATCGGGCTGGTGATTCTGAACGGCCTGACGAAGGACGGCGACGAATACGGCGGCGGCCAAATTCTCGATC CGGACAACGGCAAGGTCTATCGCAGCAAAGTGCGCCTGACCGACAACGGCAAGAAGCTCAGCGTACGCGGCTACATCGGC GTGCCAATGCTGGGCCGCTCGCAAACCTGGGTACGCCAGGAATAA
Upstream 100 bases:
>100_bases GTGGCCGTTGCAATCGAGATCGTGCTCGCCATGACGTTCTTGCATGTCGCAATTACAAGGAAATCCACCAGGCAATCCAG CCATTGAGAAAGGAACACAC
Downstream 100 bases:
>100_bases GGAAAAACCATGAAAGCATTTATTCTTGAGCGATATGGAAAAAAGCGCGCGTTGCGCTTGGCGGACATGCCGACTCCGGA GTTGCGCGACGACGAGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MPSITLKPLTAGQAASTVGAMAILRLKQTGSVGLILAAALMAPPVRADDASPAGLWRNVDDVSGKPRALIRITESNETLQ GRIEKVFPGPTEDPNPKCDKCQGANKDAPVIGLVILNGLTKDGDEYGGGQILDPDNGKVYRSKVRLTDNGKKLSVRGYIG VPMLGRSQTWVRQE
Sequences:
>Translated_174_residues MPSITLKPLTAGQAASTVGAMAILRLKQTGSVGLILAAALMAPPVRADDASPAGLWRNVDDVSGKPRALIRITESNETLQ GRIEKVFPGPTEDPNPKCDKCQGANKDAPVIGLVILNGLTKDGDEYGGGQILDPDNGKVYRSKVRLTDNGKKLSVRGYIG VPMLGRSQTWVRQE >Mature_173_residues PSITLKPLTAGQAASTVGAMAILRLKQTGSVGLILAAALMAPPVRADDASPAGLWRNVDDVSGKPRALIRITESNETLQG RIEKVFPGPTEDPNPKCDKCQGANKDAPVIGLVILNGLTKDGDEYGGGQILDPDNGKVYRSKVRLTDNGKKLSVRGYIGV PMLGRSQTWVRQE
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18475; Mature: 18343
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSITLKPLTAGQAASTVGAMAILRLKQTGSVGLILAAALMAPPVRADDASPAGLWRNVD CCCCEECCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCH DVSGKPRALIRITESNETLQGRIEKVFPGPTEDPNPKCDKCQGANKDAPVIGLVILNGLT HCCCCCEEEEEEECCCCCEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC KDGDEYGGGQILDPDNGKVYRSKVRLTDNGKKLSVRGYIGVPMLGRSQTWVRQE CCCCCCCCCEEECCCCCEEEEEEEEEECCCCEEEEEEEECCCEECCCCCCCCCC >Mature Secondary Structure PSITLKPLTAGQAASTVGAMAILRLKQTGSVGLILAAALMAPPVRADDASPAGLWRNVD CCCEECCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCH DVSGKPRALIRITESNETLQGRIEKVFPGPTEDPNPKCDKCQGANKDAPVIGLVILNGLT HCCCCCEEEEEEECCCCCEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC KDGDEYGGGQILDPDNGKVYRSKVRLTDNGKKLSVRGYIGVPMLGRSQTWVRQE CCCCCCCCCEEECCCCCEEEEEEEEEECCCCEEEEEEEECCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA