| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91786010
Identifier: 91786010
GI number: 91786010
Start: 101791
End: 102594
Strand: Reverse
Name: 91786010
Synonym: Bpro_0098
Alternate gene names: NA
Gene position: 102594-101791 (Counterclockwise)
Preceding gene: 91786013
Following gene: 91785985
Centisome position: 1.97
GC content: 63.43
Gene sequence:
>804_bases ATGGAATCCTTGCTCACTTATGACCGGCTGCATTCCGACACGGCCGGCGAGTCTCATTTCGCGCGCCTGGAAATCAGCCT GTCCACGCGTCACTTTGCGCCGCCGGCCCCGCCGTTCGGCGTGTCCGAATTGACCCCCGTCTCCCGCTGCGGATTCCTGC GCGTGCTGGCCGGATTTGTCGGCGATTTACATCCCTCGCCCCTACACATGTGGATTTTCTTCCTCAACGGTGAAATGGAA TTCGAAGCAAGCGATGGCGAACGCCGACGCGACGTCCCGGGCAACGCGCTGTTGCTGGAGGACACGACGGGAAAAGGACA CCGCAGCCGGGTGCCGGGTGCCGGGTGCCGGGTGCCGGGTGCCGGGTGCCGGGCGCCGCCGACGCGGTTCTCGCGGCTGT CCAGCTGTGCACTAAGTTTTTTCAACGAGGAGGACTCCATGGGCAATCGCTTTTTACGTCTGGCCGTTATTTATCTTTTG GTTGGCGTGACGCTGGGCATTGGGATGGCCGCCAGCCATAACTACACGATGCGACCGGTTCATGCCCACCTGAACCTGCT GGGCTGGGCCAGCATGGGCTTGTTTGGGCTGTGGTACCGGTCTGCGCCTGCGGCGGCCGACACCCGGCTGGCCAAGGTTC ATTTCTGGCTGCACAACCTCGCCCTGCCGGTCCAGATGGTCACGCTGGCCATGTTTATGGGCGGCAACCAGGCCGTGGAA CCGGTGCTCGCGCTGGCCTCGGTGGTGATCGGCGTCGGCCTCGTGTGCTTCGCGATCAACCTGTGGAAGCACACCGGAAG CTGA
Upstream 100 bases:
>100_bases CCGGGCATGACAGCAGCACCGTTGCGCAAGGCTTGCGCGATGCGCCGATGTACGGCAAACTCCGGCGAGCCCGGTGAAGC ACCGGGTAGAGGGAGTGGCC
Downstream 100 bases:
>100_bases CGCAAGCCGGCATGCGCAGCCTCACCACCAACTGGTGAGGCCCCCTGTGAACAGGCCCTGGCCCCAATACGGTTCATTCA AGGACCCGTGAAGCTCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin Domain Protein; Cupin 2 Barrel
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MESLLTYDRLHSDTAGESHFARLEISLSTRHFAPPAPPFGVSELTPVSRCGFLRVLAGFVGDLHPSPLHMWIFFLNGEME FEASDGERRRDVPGNALLLEDTTGKGHRSRVPGAGCRVPGAGCRAPPTRFSRLSSCALSFFNEEDSMGNRFLRLAVIYLL VGVTLGIGMAASHNYTMRPVHAHLNLLGWASMGLFGLWYRSAPAAADTRLAKVHFWLHNLALPVQMVTLAMFMGGNQAVE PVLALASVVIGVGLVCFAINLWKHTGS
Sequences:
>Translated_267_residues MESLLTYDRLHSDTAGESHFARLEISLSTRHFAPPAPPFGVSELTPVSRCGFLRVLAGFVGDLHPSPLHMWIFFLNGEME FEASDGERRRDVPGNALLLEDTTGKGHRSRVPGAGCRVPGAGCRAPPTRFSRLSSCALSFFNEEDSMGNRFLRLAVIYLL VGVTLGIGMAASHNYTMRPVHAHLNLLGWASMGLFGLWYRSAPAAADTRLAKVHFWLHNLALPVQMVTLAMFMGGNQAVE PVLALASVVIGVGLVCFAINLWKHTGS >Mature_267_residues MESLLTYDRLHSDTAGESHFARLEISLSTRHFAPPAPPFGVSELTPVSRCGFLRVLAGFVGDLHPSPLHMWIFFLNGEME FEASDGERRRDVPGNALLLEDTTGKGHRSRVPGAGCRVPGAGCRAPPTRFSRLSSCALSFFNEEDSMGNRFLRLAVIYLL VGVTLGIGMAASHNYTMRPVHAHLNLLGWASMGLFGLWYRSAPAAADTRLAKVHFWLHNLALPVQMVTLAMFMGGNQAVE PVLALASVVIGVGLVCFAINLWKHTGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29069; Mature: 29069
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLLTYDRLHSDTAGESHFARLEISLSTRHFAPPAPPFGVSELTPVSRCGFLRVLAGFV CCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GDLHPSPLHMWIFFLNGEMEFEASDGERRRDVPGNALLLEDTTGKGHRSRVPGAGCRVPG HCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC AGCRAPPTRFSRLSSCALSFFNEEDSMGNRFLRLAVIYLLVGVTLGIGMAASHNYTMRPV CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHH HAHLNLLGWASMGLFGLWYRSAPAAADTRLAKVHFWLHNLALPVQMVTLAMFMGGNQAVE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH PVLALASVVIGVGLVCFAINLWKHTGS HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MESLLTYDRLHSDTAGESHFARLEISLSTRHFAPPAPPFGVSELTPVSRCGFLRVLAGFV CCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GDLHPSPLHMWIFFLNGEMEFEASDGERRRDVPGNALLLEDTTGKGHRSRVPGAGCRVPG HCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC AGCRAPPTRFSRLSSCALSFFNEEDSMGNRFLRLAVIYLLVGVTLGIGMAASHNYTMRPV CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHH HAHLNLLGWASMGLFGLWYRSAPAAADTRLAKVHFWLHNLALPVQMVTLAMFMGGNQAVE HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH PVLALASVVIGVGLVCFAINLWKHTGS HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA