| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fabG [H]
Identifier: 91786009
GI number: 91786009
Start: 100735
End: 101523
Strand: Direct
Name: fabG [H]
Synonym: Bpro_0097
Alternate gene names: 91786009
Gene position: 100735-101523 (Clockwise)
Preceding gene: 91786008
Following gene: 91786011
Centisome position: 1.94
GC content: 62.61
Gene sequence:
>789_bases ATGACGTCTGATAATTCATCCATGTCGGTAGCCGTGATCACAGGCGGTGCCCGCGGCATCGGCCTGGCGATTGGCCAGTG GTTCCTGAAACACGGTCATCGGGTCGCACTGCTCGACATCGACGGCGATACGCTGGCCCAGACGGCCGCCAGGCTGAATG ACGATCACGTGCTTGCCGTCCACTGTGACGTGTCCGACCCGCAGCAGGTGCAAGCTGCCGTGGACAAGGTAAGGGCTGCC TTCGGCCGGATTGACGCGTTGGTTAATAACGCCGGTGTGGCGGTGTTCAAACCCATTGCTGAAACTACCTTTGCGGAATG GCGCCACGTGATGGCGACGAATCTTGACGGTGCGTTTCTGTGTACCCAGGCCTGCGCACCGGTCATGCAAAAAACTGGCG GTGGCAGCGTTGTCAATATCGCGTCCATCTCCGGTCTGCGCGCCAGCACACTGCGCGTTGCGTACGGCACCAGCAAGGCC GCGCTCATACACCTTACCAAGCAGCAGGCCGTGGAGCTGGGCAATGTCGGCATCCGGGTGAACGCAATCGCTCCCGGCCC CGTAGAGACCGAGATGGCCAAGCTGGTTCACAGCGTGGCCATCCGCTCGGACTACTACGATGCAATCCCGCTGAACCGCT ATGGCACAACCGAGGAGATCGCGTCGGTCGCCGGTTTCCTCTGCAGTGCTGCCGCGAGTTATGTGAACGGCCAGGTCGTG GCCGCGGACGGCGGCTTCGACGCTGCCGGCGTAGGTCTGCCCACGTTGCGCAAGCGGGCCGCAGCCTAG
Upstream 100 bases:
>100_bases TCTGCATGGCGTTTTGAGGTCACGCTGGAAGAATGGCTGCCGGCCAGTACGCAAGCCAGTAAGCAATAACAAGCGATCAT CTTTTTTTATGGAGCATCCT
Downstream 100 bases:
>100_bases GCAATTCGTTCAACGGTGCAAAAGCGCATAAGGGCGCATCGTGCTGGTGCCGCTCATCTCCTTCCCCCGCTGGGGGAGGG CCCGGATGGCGGCTCACGGC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTSDNSSMSVAVITGGARGIGLAIGQWFLKHGHRVALLDIDGDTLAQTAARLNDDHVLAVHCDVSDPQQVQAAVDKVRAA FGRIDALVNNAGVAVFKPIAETTFAEWRHVMATNLDGAFLCTQACAPVMQKTGGGSVVNIASISGLRASTLRVAYGTSKA ALIHLTKQQAVELGNVGIRVNAIAPGPVETEMAKLVHSVAIRSDYYDAIPLNRYGTTEEIASVAGFLCSAAASYVNGQVV AADGGFDAAGVGLPTLRKRAAA
Sequences:
>Translated_262_residues MTSDNSSMSVAVITGGARGIGLAIGQWFLKHGHRVALLDIDGDTLAQTAARLNDDHVLAVHCDVSDPQQVQAAVDKVRAA FGRIDALVNNAGVAVFKPIAETTFAEWRHVMATNLDGAFLCTQACAPVMQKTGGGSVVNIASISGLRASTLRVAYGTSKA ALIHLTKQQAVELGNVGIRVNAIAPGPVETEMAKLVHSVAIRSDYYDAIPLNRYGTTEEIASVAGFLCSAAASYVNGQVV AADGGFDAAGVGLPTLRKRAAA >Mature_261_residues TSDNSSMSVAVITGGARGIGLAIGQWFLKHGHRVALLDIDGDTLAQTAARLNDDHVLAVHCDVSDPQQVQAAVDKVRAAF GRIDALVNNAGVAVFKPIAETTFAEWRHVMATNLDGAFLCTQACAPVMQKTGGGSVVNIASISGLRASTLRVAYGTSKAA LIHLTKQQAVELGNVGIRVNAIAPGPVETEMAKLVHSVAIRSDYYDAIPLNRYGTTEEIASVAGFLCSAAASYVNGQVVA ADGGFDAAGVGLPTLRKRAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=238, Percent_Identity=33.6134453781513, Blast_Score=130, Evalue=9e-31, Organism=Homo sapiens, GI10190704, Length=255, Percent_Identity=36.4705882352941, Blast_Score=128, Evalue=5e-30, Organism=Homo sapiens, GI19923817, Length=246, Percent_Identity=33.739837398374, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI32483357, Length=240, Percent_Identity=32.9166666666667, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI15277342, Length=251, Percent_Identity=32.6693227091633, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI4503301, Length=209, Percent_Identity=31.1004784688995, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI5031737, Length=242, Percent_Identity=30.1652892561983, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI31542939, Length=191, Percent_Identity=35.0785340314136, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI4758504, Length=252, Percent_Identity=30.952380952381, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI126723750, Length=249, Percent_Identity=28.1124497991968, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI66933014, Length=226, Percent_Identity=28.7610619469027, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI59889578, Length=228, Percent_Identity=31.140350877193, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI7705925, Length=243, Percent_Identity=30.4526748971193, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=31.0880829015544, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI224922801, Length=169, Percent_Identity=33.1360946745562, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI83715985, Length=248, Percent_Identity=28.6290322580645, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI209862901, Length=196, Percent_Identity=35.2040816326531, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI19923983, Length=196, Percent_Identity=35.2040816326531, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI142976729, Length=193, Percent_Identity=29.0155440414508, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=28.8659793814433, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI7706318, Length=192, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4504503, Length=187, Percent_Identity=29.4117647058824, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=31.1475409836066, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI109715829, Length=198, Percent_Identity=25.7575757575758, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI7657478, Length=197, Percent_Identity=28.4263959390863, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI210032110, Length=193, Percent_Identity=26.9430051813472, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI4504505, Length=188, Percent_Identity=29.2553191489362, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=37.1900826446281, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=31.7073170731707, Blast_Score=130, Evalue=8e-32, Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=34.9397590361446, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1790717, Length=238, Percent_Identity=34.453781512605, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI87082100, Length=248, Percent_Identity=36.6935483870968, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=31.3008130081301, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1789208, Length=242, Percent_Identity=31.404958677686, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=33.6, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1786812, Length=246, Percent_Identity=30.8943089430894, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789057, Length=252, Percent_Identity=28.1746031746032, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789378, Length=242, Percent_Identity=28.5123966942149, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI2367365, Length=245, Percent_Identity=29.7959183673469, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1786701, Length=182, Percent_Identity=30.2197802197802, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787820, Length=180, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1787526, Length=189, Percent_Identity=27.5132275132275, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787545, Length=263, Percent_Identity=25.4752851711027, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25147288, Length=240, Percent_Identity=34.5833333333333, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=33.469387755102, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=31.3253012048193, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=29.6, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17560676, Length=245, Percent_Identity=28.5714285714286, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562906, Length=258, Percent_Identity=30.2325581395349, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=29.4776119402985, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17538480, Length=259, Percent_Identity=31.2741312741313, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=31.4176245210728, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=28.8, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=31.1284046692607, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17560332, Length=258, Percent_Identity=31.0077519379845, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI193204405, Length=258, Percent_Identity=29.4573643410853, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17560150, Length=254, Percent_Identity=31.1023622047244, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=29.5454545454545, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=28.2945736434109, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17562990, Length=251, Percent_Identity=30.6772908366534, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17538182, Length=248, Percent_Identity=30.241935483871, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17531453, Length=258, Percent_Identity=27.906976744186, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17536025, Length=246, Percent_Identity=29.6747967479675, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17536651, Length=248, Percent_Identity=27.8225806451613, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17560220, Length=259, Percent_Identity=27.7992277992278, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=31.0204081632653, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17561272, Length=189, Percent_Identity=32.2751322751323, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17538486, Length=256, Percent_Identity=29.296875, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17565030, Length=259, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=30.5343511450382, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=29.5454545454545, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17567345, Length=186, Percent_Identity=26.3440860215054, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=27.0992366412214, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71997099, Length=224, Percent_Identity=29.4642857142857, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508651, Length=252, Percent_Identity=25.7936507936508, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17508895, Length=186, Percent_Identity=26.8817204301075, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17568967, Length=220, Percent_Identity=27.7272727272727, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17555612, Length=207, Percent_Identity=30.9178743961353, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=244, Percent_Identity=31.9672131147541, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6322861, Length=231, Percent_Identity=29.4372294372294, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323882, Length=214, Percent_Identity=28.9719626168224, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6322227, Length=201, Percent_Identity=26.865671641791, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320089, Length=194, Percent_Identity=26.8041237113402, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323458, Length=195, Percent_Identity=31.2820512820513, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI23397609, Length=247, Percent_Identity=35.2226720647773, Blast_Score=128, Evalue=4e-30, Organism=Drosophila melanogaster, GI24639444, Length=240, Percent_Identity=33.75, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI21355319, Length=243, Percent_Identity=32.0987654320988, Blast_Score=121, Evalue=4e-28, Organism=Drosophila melanogaster, GI24643142, Length=238, Percent_Identity=34.8739495798319, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI21357041, Length=244, Percent_Identity=31.9672131147541, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=31.4741035856574, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI24644339, Length=256, Percent_Identity=30.46875, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI24644337, Length=235, Percent_Identity=31.4893617021277, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI17737361, Length=251, Percent_Identity=29.8804780876494, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI18859837, Length=187, Percent_Identity=32.0855614973262, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI281364892, Length=193, Percent_Identity=32.1243523316062, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI221331218, Length=191, Percent_Identity=32.9842931937173, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24665243, Length=191, Percent_Identity=32.9842931937173, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI221331216, Length=192, Percent_Identity=32.8125, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24665247, Length=192, Percent_Identity=32.8125, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=29.0816326530612, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI116007236, Length=199, Percent_Identity=32.6633165829146, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28571387, Length=201, Percent_Identity=30.8457711442786, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24641232, Length=196, Percent_Identity=31.6326530612245, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640492, Length=200, Percent_Identity=26.5, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI21357673, Length=184, Percent_Identity=27.7173913043478, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI116007238, Length=223, Percent_Identity=29.1479820627803, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24649181, Length=240, Percent_Identity=27.9166666666667, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI281364494, Length=197, Percent_Identity=28.9340101522843, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27154; Mature: 27023
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDNSSMSVAVITGGARGIGLAIGQWFLKHGHRVALLDIDGDTLAQTAARLNDDHVLAV CCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCEEEE HCDVSDPQQVQAAVDKVRAAFGRIDALVNNAGVAVFKPIAETTFAEWRHVMATNLDGAFL EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHH CTQACAPVMQKTGGGSVVNIASISGLRASTLRVAYGTSKAALIHLTKQQAVELGNVGIRV HHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECHHHHHHHCCCCEEE NAIAPGPVETEMAKLVHSVAIRSDYYDAIPLNRYGTTEEIASVAGFLCSAAASYVNGQVV EEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEE AADGGFDAAGVGLPTLRKRAAA EECCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure TSDNSSMSVAVITGGARGIGLAIGQWFLKHGHRVALLDIDGDTLAQTAARLNDDHVLAV CCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCEEEE HCDVSDPQQVQAAVDKVRAAFGRIDALVNNAGVAVFKPIAETTFAEWRHVMATNLDGAFL EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHH CTQACAPVMQKTGGGSVVNIASISGLRASTLRVAYGTSKAALIHLTKQQAVELGNVGIRV HHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECHHHHHHHCCCCEEE NAIAPGPVETEMAKLVHSVAIRSDYYDAIPLNRYGTTEEIASVAGFLCSAAASYVNGQVV EEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEE AADGGFDAAGVGLPTLRKRAAA EECCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]