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The map label for this gene is nanR [H]

Identifier: 91786008

GI number: 91786008

Start: 99774

End: 100487

Strand: Direct

Name: nanR [H]

Synonym: Bpro_0095

Alternate gene names: 91786008

Gene position: 99774-100487 (Clockwise)

Preceding gene: 91786007

Following gene: 91786009

Centisome position: 1.92

GC content: 69.33

Gene sequence:

>714_bases
ATGACCACCGAACAGATCCAGCGCCGCAAGCTGTACCAGGAAGTGCTCGACCGGCTGCTGGAGCGGATCCGCAGCGGCGA
AATTCCGCCCGGTGCCCACCTGCCTTCCGAGCGCGAGCTGATGGAGTTCTACGGCGTGGGCCGGCCGGCGGTGCGCGAGG
CGCTGCAGGCGCTCGAGCGCTCGGGCATCGTCGAGATCACCCATGGCGAGCGCGCGCGCGTTGTCATTCCCACGGCCGGG
CGGCTGATCGAGCAGCTCGCCGGCGGCGCACGCCACCTGCTGCACAGCCAGCCCGACATGCTGGAGCACCTGAAAGACGC
GCGCGTCTTTCTGGAAGTGGGCATGGCCCGCGTGGCGGCCGAGCGCGCGACGGACGAAGACATTGCGCGACTGCGGCAGC
GGCTGGCCGAACACCGGGCCTCGGTCGGCAAGGTCGACGAGTTCATCCAGCTCGACATGGCTTTTCACCGCGAGATTGCG
CGCATCAGCGGCAACCCGATCTTCCCCGCCATTCTCGAGGCCCTGTTCGGCTGGGCGATCGAGTATTACCACCCCTTTGT
CCGCGCGCCCGGCGCCGAGCAGCTGACGCTGGCCGAACACGCGCGGCTCGTCGAGGCCATCGCCACGCGCGATCCGCAAG
CGGCGGAGGCTGCCATCCGGGAGCACCTGACGCGGGCCAATGAGCTGTATCGCCAGCTGGACCCGTCGCGCTAG

Upstream 100 bases:

>100_bases
CGTTTTTCGGCGCCGTGCGTGCCGGCCGTTTGCTCGACTAAGTGATAATTAAAAGCTCACCCCGCCCGAAGTTTTTCCGT
TTCCACTCCTATCCGCCACC

Downstream 100 bases:

>100_bases
CCAGGCCCGGCGCCGGCTGTTGAGGTCGTCAGCCTCGCCGGCGAAGTACGTTTGCAAGGCGACGGGTCGCTCAGGGCATC
TCTCGGGCGTTGTCGCCGAT

Product: transcriptional regulator NanR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTTEQIQRRKLYQEVLDRLLERIRSGEIPPGAHLPSERELMEFYGVGRPAVREALQALERSGIVEITHGERARVVIPTAG
RLIEQLAGGARHLLHSQPDMLEHLKDARVFLEVGMARVAAERATDEDIARLRQRLAEHRASVGKVDEFIQLDMAFHREIA
RISGNPIFPAILEALFGWAIEYYHPFVRAPGAEQLTLAEHARLVEAIATRDPQAAEAAIREHLTRANELYRQLDPSR

Sequences:

>Translated_237_residues
MTTEQIQRRKLYQEVLDRLLERIRSGEIPPGAHLPSERELMEFYGVGRPAVREALQALERSGIVEITHGERARVVIPTAG
RLIEQLAGGARHLLHSQPDMLEHLKDARVFLEVGMARVAAERATDEDIARLRQRLAEHRASVGKVDEFIQLDMAFHREIA
RISGNPIFPAILEALFGWAIEYYHPFVRAPGAEQLTLAEHARLVEAIATRDPQAAEAAIREHLTRANELYRQLDPSR
>Mature_236_residues
TTEQIQRRKLYQEVLDRLLERIRSGEIPPGAHLPSERELMEFYGVGRPAVREALQALERSGIVEITHGERARVVIPTAGR
LIEQLAGGARHLLHSQPDMLEHLKDARVFLEVGMARVAAERATDEDIARLRQRLAEHRASVGKVDEFIQLDMAFHREIAR
ISGNPIFPAILEALFGWAIEYYHPFVRAPGAEQLTLAEHARLVEAIATRDPQAAEAAIREHLTRANELYRQLDPSR

Specific function: Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789621, Length=228, Percent_Identity=41.6666666666667, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1789353, Length=228, Percent_Identity=31.5789473684211, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787436, Length=188, Percent_Identity=31.9148936170213, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI48994961, Length=224, Percent_Identity=29.9107142857143, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI87082208, Length=221, Percent_Identity=28.9592760180996, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790780, Length=219, Percent_Identity=29.6803652968037, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26850; Mature: 26719

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEQIQRRKLYQEVLDRLLERIRSGEIPPGAHLPSERELMEFYGVGRPAVREALQALER
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
SGIVEITHGERARVVIPTAGRLIEQLAGGARHLLHSQPDMLEHLKDARVFLEVGMARVAA
CCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ERATDEDIARLRQRLAEHRASVGKVDEFIQLDMAFHREIARISGNPIFPAILEALFGWAI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EYYHPFVRAPGAEQLTLAEHARLVEAIATRDPQAAEAAIREHLTRANELYRQLDPSR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTEQIQRRKLYQEVLDRLLERIRSGEIPPGAHLPSERELMEFYGVGRPAVREALQALER
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
SGIVEITHGERARVVIPTAGRLIEQLAGGARHLLHSQPDMLEHLKDARVFLEVGMARVAA
CCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ERATDEDIARLRQRLAEHRASVGKVDEFIQLDMAFHREIARISGNPIFPAILEALFGWAI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EYYHPFVRAPGAEQLTLAEHARLVEAIATRDPQAAEAAIREHLTRANELYRQLDPSR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA