| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is phnA [H]
Identifier: 91785998
GI number: 91785998
Start: 88293
End: 88634
Strand: Direct
Name: phnA [H]
Synonym: Bpro_0085
Alternate gene names: 91785998
Gene position: 88293-88634 (Clockwise)
Preceding gene: 91785997
Following gene: 91785999
Centisome position: 1.7
GC content: 60.82
Gene sequence:
>342_bases ATGCCCACTATCCCAGCCTGCCCCCAGTGCGCCCTGGAGAACACCTACCCGGACGGCGACAACTATGTTTGTGCCGACTG CGGCCATGAATGGCCCATGCTGGAGACCGCAGACGCTGATGACAGCGCCGACGCCGTGGTCAAGGACGCCAATGGCAACG TGCTGGCCGACGGCGACGCCGTGGTGCTCATCAAGGACCTGAAAGTCAAGGGTTCGTCCATCACCCTCAAAATGGGGACC AAGGTCAAAAGCATTCGCCTGGTCGGCGGCGACCATGAGGTGGACTGCAAAATGGACGCCGGCAGTTTCATGCTGAAAGC CTGCTACCTGAGGAAGGCCTGA
Upstream 100 bases:
>100_bases TCCATCAGGCCAGGCAGGCCATCCTGTCGGGCCGGGTTGCAGCCCCGGCCCATGAGGGATACTCCAGCTTGCCTCAACTA CCTGCGATTTGAACGGAATC
Downstream 100 bases:
>100_bases CCGGGACCCGCCGGGCCAGGCGCTTTCCCACCGGCTCTCCCAGATACAGGACAGACAAGACAGGGCCGGAACACACGGCG CTGATCAAATCAGTCGACGC
Product: alkylphosphonate utilization operon protein PhnA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MPTIPACPQCALENTYPDGDNYVCADCGHEWPMLETADADDSADAVVKDANGNVLADGDAVVLIKDLKVKGSSITLKMGT KVKSIRLVGGDHEVDCKMDAGSFMLKACYLRKA
Sequences:
>Translated_113_residues MPTIPACPQCALENTYPDGDNYVCADCGHEWPMLETADADDSADAVVKDANGNVLADGDAVVLIKDLKVKGSSITLKMGT KVKSIRLVGGDHEVDCKMDAGSFMLKACYLRKA >Mature_112_residues PTIPACPQCALENTYPDGDNYVCADCGHEWPMLETADADDSADAVVKDANGNVLADGDAVVLIKDLKVKGSSITLKMGTK VKSIRLVGGDHEVDCKMDAGSFMLKACYLRKA
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790547, Length=111, Percent_Identity=54.954954954955, Blast_Score=122, Evalue=8e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004624 - InterPro: IPR013988 - InterPro: IPR013987 [H]
Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]
EC number: NA
Molecular weight: Translated: 12023; Mature: 11892
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIPACPQCALENTYPDGDNYVCADCGHEWPMLETADADDSADAVVKDANGNVLADGDA CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCEEEECCCCCEEECCCE VVLIKDLKVKGSSITLKMGTKVKSIRLVGGDHEVDCKMDAGSFMLKACYLRKA EEEEEECEECCCEEEEEECCCEEEEEEECCCCEEEEEECCCHHEEEEEEECCC >Mature Secondary Structure PTIPACPQCALENTYPDGDNYVCADCGHEWPMLETADADDSADAVVKDANGNVLADGDA CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCEEEECCCCCEEECCCE VVLIKDLKVKGSSITLKMGTKVKSIRLVGGDHEVDCKMDAGSFMLKACYLRKA EEEEEECEECCCEEEEEECCCEEEEEEECCCCEEEEEECCCHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]