The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91785982

Identifier: 91785982

GI number: 91785982

Start: 72477

End: 73247

Strand: Reverse

Name: 91785982

Synonym: Bpro_0069

Alternate gene names: NA

Gene position: 73247-72477 (Counterclockwise)

Preceding gene: 91785983

Following gene: 91785976

Centisome position: 1.41

GC content: 64.46

Gene sequence:

>771_bases
GTGAACATCCCATCCCTGAAAAAAACCGTCAGCGCCGAGGAATGGCAGTTGCGCTGCGACCTCGCCGCCTGCTACCGCCT
GGTAGCGCTCTATGGCTGGAGCGACCTGGTGTTCACCCACATCAGCGCCAAGCTGCCAGAGGAGGTAGCAGGCCCGGGCG
CGCACCACTTCCTGATCAACCCCTACGGCCTGATGTTCGACGAGATCACCGCCTCCAGCCTGGTCAAGGTCGACGGGCAG
TGCAACAAAGTCATTGACTCGCCCTTCCCGGTCAACCCGGCCGGTTTCGTGATTCACAGCGCGGTGCACGACGCCCGGCC
CGACGCCGGCTGCGTGCTGCACACCCACACGCGCGCCGGCGTCGCGGTCAGTGCGCAAAAGTGCGGCGTGCTGCCGATCA
GCCAGCAGTCCACCTTTGTGCTGGCCTCGCTGGCCTACCACGACTACGAGGGCGTCGCCTTTCGCGGCGAGGAAAGGCCG
CGCCTGCAGGCCGATCTGGGGTCCGCCAATTTTTTGATGCTGCGCAACCATGGCCTGCTGGTGGTGGGCAAGACCATTGC
CGACGCCTTTTTGAACATGTACATATTTGAAAACACCTGCCGCATCCAGCTCGACGCGCAGGCCGGCGGCGAACTCATCC
TGGTCAATCCGCAGATCATCCAGGGCGTGTCGGAAGCCCTGCGCGTGCAGACGGGCGGCATGGGCGGCGCCTTTGCCTGG
CCCTCGCTGATCCGCAGGCTGGAGCGGCTGGACGACAGCTACCGCACATAA

Upstream 100 bases:

>100_bases
ACGCTGATGAAAGTTCAATTTCTGACAATTGCACGTGCCGCACAGGCGTATCGTACAAAGCCAGGCCTTTTTAAAAAACA
ACCCGCCAGGAGACAACCCC

Downstream 100 bases:

>100_bases
ACTGCCCCCACCCGGCTTGTGCAAGGCGACCGCCAGGGACTTCCTCCAGGGGGCTTGCAAGGGCCTCTAAGTACTGACCA
GGGAAAGCATCGGCGGATGC

Product: class II aldolase/adducin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNIPSLKKTVSAEEWQLRCDLAACYRLVALYGWSDLVFTHISAKLPEEVAGPGAHHFLINPYGLMFDEITASSLVKVDGQ
CNKVIDSPFPVNPAGFVIHSAVHDARPDAGCVLHTHTRAGVAVSAQKCGVLPISQQSTFVLASLAYHDYEGVAFRGEERP
RLQADLGSANFLMLRNHGLLVVGKTIADAFLNMYIFENTCRIQLDAQAGGELILVNPQIIQGVSEALRVQTGGMGGAFAW
PSLIRRLERLDDSYRT

Sequences:

>Translated_256_residues
MNIPSLKKTVSAEEWQLRCDLAACYRLVALYGWSDLVFTHISAKLPEEVAGPGAHHFLINPYGLMFDEITASSLVKVDGQ
CNKVIDSPFPVNPAGFVIHSAVHDARPDAGCVLHTHTRAGVAVSAQKCGVLPISQQSTFVLASLAYHDYEGVAFRGEERP
RLQADLGSANFLMLRNHGLLVVGKTIADAFLNMYIFENTCRIQLDAQAGGELILVNPQIIQGVSEALRVQTGGMGGAFAW
PSLIRRLERLDDSYRT
>Mature_256_residues
MNIPSLKKTVSAEEWQLRCDLAACYRLVALYGWSDLVFTHISAKLPEEVAGPGAHHFLINPYGLMFDEITASSLVKVDGQ
CNKVIDSPFPVNPAGFVIHSAVHDARPDAGCVLHTHTRAGVAVSAQKCGVLPISQQSTFVLASLAYHDYEGVAFRGEERP
RLQADLGSANFLMLRNHGLLVVGKTIADAFLNMYIFENTCRIQLDAQAGGELILVNPQIIQGVSEALRVQTGGMGGAFAW
PSLIRRLERLDDSYRT

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI29826323, Length=259, Percent_Identity=42.8571428571429, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI29826319, Length=259, Percent_Identity=42.8571428571429, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI29826325, Length=259, Percent_Identity=42.8571428571429, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI29826321, Length=259, Percent_Identity=42.8571428571429, Blast_Score=185, Evalue=3e-47,
Organism=Homo sapiens, GI9943848, Length=256, Percent_Identity=39.0625, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI9951927, Length=256, Percent_Identity=39.0625, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI62912453, Length=256, Percent_Identity=39.0625, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI9257190, Length=255, Percent_Identity=37.2549019607843, Blast_Score=153, Evalue=1e-37,
Organism=Homo sapiens, GI297307158, Length=207, Percent_Identity=40.5797101449275, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI9257192, Length=207, Percent_Identity=40.5797101449275, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI89276787, Length=255, Percent_Identity=37.2549019607843, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI297307160, Length=255, Percent_Identity=37.2549019607843, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI115533216, Length=230, Percent_Identity=40, Blast_Score=161, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI115533218, Length=230, Percent_Identity=40, Blast_Score=161, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI71989555, Length=259, Percent_Identity=34.3629343629344, Blast_Score=128, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI71989541, Length=259, Percent_Identity=34.3629343629344, Blast_Score=127, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI71989544, Length=259, Percent_Identity=34.3629343629344, Blast_Score=127, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI71989560, Length=259, Percent_Identity=34.3629343629344, Blast_Score=127, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI71989550, Length=259, Percent_Identity=34.3629343629344, Blast_Score=127, Evalue=4e-30,
Organism=Drosophila melanogaster, GI281363755, Length=217, Percent_Identity=38.7096774193548, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI281363751, Length=217, Percent_Identity=38.7096774193548, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24655690, Length=217, Percent_Identity=38.7096774193548, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI281363761, Length=191, Percent_Identity=41.3612565445026, Blast_Score=131, Evalue=3e-31,
Organism=Drosophila melanogaster, GI281363759, Length=191, Percent_Identity=41.3612565445026, Blast_Score=131, Evalue=3e-31,
Organism=Drosophila melanogaster, GI281363753, Length=191, Percent_Identity=41.3612565445026, Blast_Score=131, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24655685, Length=191, Percent_Identity=41.3612565445026, Blast_Score=131, Evalue=3e-31,
Organism=Drosophila melanogaster, GI281363763, Length=217, Percent_Identity=38.7096774193548, Blast_Score=131, Evalue=5e-31,
Organism=Drosophila melanogaster, GI281363757, Length=217, Percent_Identity=38.7096774193548, Blast_Score=131, Evalue=5e-31,
Organism=Drosophila melanogaster, GI17136738, Length=217, Percent_Identity=38.7096774193548, Blast_Score=131, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 27934; Mature: 27934

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPSLKKTVSAEEWQLRCDLAACYRLVALYGWSDLVFTHISAKLPEEVAGPGAHHFLIN
CCCCCHHHHCCCCHHEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCCCEEEEC
PYGLMFDEITASSLVKVDGQCNKVIDSPFPVNPAGFVIHSAVHDARPDAGCVLHTHTRAG
CHHHHHHHHHHHHEEEECCCCCHHCCCCCCCCCHHHEEEHHHHHCCCCCCEEEEECCCCC
VAVSAQKCGVLPISQQSTFVLASLAYHDYEGVAFRGEERPRLQADLGSANFLMLRNHGLL
EEEECCCCCCEEECCCCEEEEEEEHHCCCCCEEEECCCCCCEEECCCCCEEEEEECCCEE
VVGKTIADAFLNMYIFENTCRIQLDAQAGGELILVNPQIIQGVSEALRVQTGGMGGAFAW
EEEHHHHHHHHHHHEECCEEEEEEECCCCCCEEEECHHHHHHHHHHHHEECCCCCCHHHH
PSLIRRLERLDDSYRT
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIPSLKKTVSAEEWQLRCDLAACYRLVALYGWSDLVFTHISAKLPEEVAGPGAHHFLIN
CCCCCHHHHCCCCHHEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCCCEEEEC
PYGLMFDEITASSLVKVDGQCNKVIDSPFPVNPAGFVIHSAVHDARPDAGCVLHTHTRAG
CHHHHHHHHHHHHEEEECCCCCHHCCCCCCCCCHHHEEEHHHHHCCCCCCEEEEECCCCC
VAVSAQKCGVLPISQQSTFVLASLAYHDYEGVAFRGEERPRLQADLGSANFLMLRNHGLL
EEEECCCCCCEEECCCCEEEEEEEHHCCCCCEEEECCCCCCEEECCCCCEEEEEECCCEE
VVGKTIADAFLNMYIFENTCRIQLDAQAGGELILVNPQIIQGVSEALRVQTGGMGGAFAW
EEEHHHHHHHHHHHEECCEEEEEEECCCCCCEEEECHHHHHHHHHHHHEECCCCCCHHHH
PSLIRRLERLDDSYRT
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]