| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785981
Identifier: 91785981
GI number: 91785981
Start: 71565
End: 72410
Strand: Direct
Name: 91785981
Synonym: Bpro_0068
Alternate gene names: NA
Gene position: 71565-72410 (Clockwise)
Preceding gene: 91785980
Following gene: 91785986
Centisome position: 1.38
GC content: 62.88
Gene sequence:
>846_bases ATGCACACCACCCTGATCGATTTGCTGCTCGAGTATGAAGTCGGCAGCCCGTCGCATTTTCTTTTCAACATCGAGGCCGC GTTTCACGAGGGGCACCATGTATTGCAGGAGCGGCTGACGATCACGCCGAGCATGAAGGTTCGCAATTTTTGCGACGAGC GCAGCGGCAACCGCTTCATACGCCTGGACGCGCCCAAGGGAATGCTGTCCGTCAACTACCACGCCCGGGTGCGGCTGATT GCCGTGCCCGTGCCCCTGCATCTGGACGAAACGCCGGTGAGCGGCGTGCCCGATGATGTCTTGCGTTACCTGATGCCCAG CCGCTACTGCGAGTCGGACTCCATGAGCCGCGCGGCGCAGCAGCTGTTTGGTGACCTGCCCCCCGGTATCGGCCGCGTGC GGGCGGTCGAGAACTGGATTCACGACTCGATCGCCTACCTGCCGGGTTGCACCTCGTCGACGACCACGGCGCGGGATGTG TTTGTGCAGCGCGCCGGCGTCTGCCGGGACTTTGCGCATCTGGGCATCACCTTGTGCCGGGCACTCAATATTCCCGCGCG GCTGGTGGTGGGTTATGTCCATTTTGACGAGCCGCCGCAGGATTTTCACGCGGTGTTCGAAGCCTGGCTGGAGGGGCGCT GGGTGCTGTTTGATCCCAGCCATCTGGCGCCCATAGACCGGCTGGTGCGCGTGGGAACGGGGCGCGACGCGAAGGACGTG GCCTTTGCCACCATTTTTGGCAATGTGCAAATGCTGCGCAAGGAACTGATCGTGGACGAGGGCGAATTGCTGCCCGACAC CCCGCCGGGATCGCATCCGCCGATGCTTTCCCTGGTCAGTACTTAG
Upstream 100 bases:
>100_bases CGCGGGTCATCACCGCACGCGAATCTGATCCTGCCTGTCCCGTGTCAACAGGGCTGCGATGTCCTTCTGACGGTTTTTAT TCTCAACCGGCACCCATTCC
Downstream 100 bases:
>100_bases AGGCCCTTGCAAGCCCCCTGGAGGAAGTCCCTGGCGGTCGCCTTGCACAAGCCGGGTGGGGGCAGTTTATGTGCGGTAGC TGTCGTCCAGCCGCTCCAGC
Product: transglutaminase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MHTTLIDLLLEYEVGSPSHFLFNIEAAFHEGHHVLQERLTITPSMKVRNFCDERSGNRFIRLDAPKGMLSVNYHARVRLI AVPVPLHLDETPVSGVPDDVLRYLMPSRYCESDSMSRAAQQLFGDLPPGIGRVRAVENWIHDSIAYLPGCTSSTTTARDV FVQRAGVCRDFAHLGITLCRALNIPARLVVGYVHFDEPPQDFHAVFEAWLEGRWVLFDPSHLAPIDRLVRVGTGRDAKDV AFATIFGNVQMLRKELIVDEGELLPDTPPGSHPPMLSLVST
Sequences:
>Translated_281_residues MHTTLIDLLLEYEVGSPSHFLFNIEAAFHEGHHVLQERLTITPSMKVRNFCDERSGNRFIRLDAPKGMLSVNYHARVRLI AVPVPLHLDETPVSGVPDDVLRYLMPSRYCESDSMSRAAQQLFGDLPPGIGRVRAVENWIHDSIAYLPGCTSSTTTARDV FVQRAGVCRDFAHLGITLCRALNIPARLVVGYVHFDEPPQDFHAVFEAWLEGRWVLFDPSHLAPIDRLVRVGTGRDAKDV AFATIFGNVQMLRKELIVDEGELLPDTPPGSHPPMLSLVST >Mature_281_residues MHTTLIDLLLEYEVGSPSHFLFNIEAAFHEGHHVLQERLTITPSMKVRNFCDERSGNRFIRLDAPKGMLSVNYHARVRLI AVPVPLHLDETPVSGVPDDVLRYLMPSRYCESDSMSRAAQQLFGDLPPGIGRVRAVENWIHDSIAYLPGCTSSTTTARDV FVQRAGVCRDFAHLGITLCRALNIPARLVVGYVHFDEPPQDFHAVFEAWLEGRWVLFDPSHLAPIDRLVRVGTGRDAKDV AFATIFGNVQMLRKELIVDEGELLPDTPPGSHPPMLSLVST
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2569c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 31413; Mature: 31413
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTTLIDLLLEYEVGSPSHFLFNIEAAFHEGHHVLQERLTITPSMKVRNFCDERSGNRFI CCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEE RLDAPKGMLSVNYHARVRLIAVPVPLHLDETPVSGVPDDVLRYLMPSRYCESDSMSRAAQ EEECCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCHHCCCCHHHHHHHH QLFGDLPPGIGRVRAVENWIHDSIAYLPGCTSSTTTARDVFVQRAGVCRDFAHLGITLCR HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALNIPARLVVGYVHFDEPPQDFHAVFEAWLEGRWVLFDPSHLAPIDRLVRVGTGRDAKDV HHCCCHHHEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCHHHH AFATIFGNVQMLRKELIVDEGELLPDTPPGSHPPMLSLVST HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure MHTTLIDLLLEYEVGSPSHFLFNIEAAFHEGHHVLQERLTITPSMKVRNFCDERSGNRFI CCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEE RLDAPKGMLSVNYHARVRLIAVPVPLHLDETPVSGVPDDVLRYLMPSRYCESDSMSRAAQ EEECCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCHHCCCCHHHHHHHH QLFGDLPPGIGRVRAVENWIHDSIAYLPGCTSSTTTARDVFVQRAGVCRDFAHLGITLCR HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALNIPARLVVGYVHFDEPPQDFHAVFEAWLEGRWVLFDPSHLAPIDRLVRVGTGRDAKDV HHCCCHHHEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCHHHH AFATIFGNVQMLRKELIVDEGELLPDTPPGSHPPMLSLVST HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]