| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is mnmG
Identifier: 91785986
GI number: 91785986
Start: 75959
End: 77980
Strand: Direct
Name: mnmG
Synonym: Bpro_0073
Alternate gene names: 91785986
Gene position: 75959-77980 (Clockwise)
Preceding gene: 91785981
Following gene: 91785987
Centisome position: 1.46
GC content: 62.76
Gene sequence:
>2022_bases ATGCAATCGCCTTATATCTATCCGCAAGAATTTGATGTGATCGTGGTCGGTGGCGGCCATGCCGGCACGGAAGCCGCGCT GGCTTCCGCCCGCATGGGCTGCAAGACCTTGCTGCTCTCGCACAACATCGAGACACTCGGCCAGATGAGCTGCAACCCCT CGATTGGCGGCATTGGCAAGGGTCACCTGGTCAAGGAAGTCGACGCCATGGGCGGGGCGATGGCGCTGGCCACGGACGAA GGCGGCATCCAGTTCCGTATTCTGAATAGTTCCAAGGGCCCGGCCGTGCGCGCCACCCGGGCGCAGGCCGACCGGATTCT GTACAAGGCGGCGATTCGGCGCCGGCTGGAAAACCAGCCCAACCTCTGGCTGTTCCAGCAGGCGGTCGATGACCTGATGG TGGAGGGCGACCGGGTGGTGGGCGCCGTCACGCAGGTCGGCATCCGTTTTCGGTCCCGCACCGTGGTGCTGACGGCCGGC ACATTTCTGGACGGCAAGATCCATGTCGGGCTCAACAATTACGCGGCGGGCCGGGCGGGCGATCCGCCGGCCGTGTCGCT GTCCAGCCGGCTGAAAGAGCTCAAGCTGCCGCAAGGCCGGCTGAAGACCGGCACGCCGCCGCGCATCGACGGCCGTACGA TTGATTTCAGCAAATGCATCGAGCAGCCGGGCGACGGCATGCCGGGCGGAACCGCCGGGCCGGTGCCGGTGTTCAGCTTC ATGGGCGGTGCTATTCCCCATCCGCAGCAGATGCCGTGCTGGATCACCCATACCAATGAGCGTACCCATGAGATCATCCG CTCCGGTTTTGATCGCAGTCCGATGTTCACCGGGAAGATCGATGGCGTGGGGCCGCGTTACTGCCCCAGCGTGGAAGACA AGATCAACCGCTTTGCCGACAAGGAAAGCCACCAGATTTTCCTGGAACCCGAAGGCCTGACCACGCACGAGATCTACCCC AACGGCATCTCGACCAGCCTGCCGTTTGACATCCAGTACGAGCTGGTGCGCTCGATGGCGGGTATGGAGAACGCCCACAT CCTGCGGCCGGGCTATGCGATCGAATACGACTACTTTGATCCGCGGGCACTGAAGACCACCTTTGAAACCCGCGCGATTG GCGGGCTGTTCTTTGCCGGCCAGATCAACGGCACCACCGGCTATGAAGAAGCGGCGGCCCAGGGCATGTTTGCCGGCATT AACGCCGCGCTGCAGTGCAGGGCACTCGGTGGCTTGCCCAACGATCATGGAGGCGCGTGGTTGCCCCGGCGCGACGAAGC CTACCTCGGCGTGCTGGTCGATGACCTGATCACCAAGGGTGTGACCGAGCCTTACCGCATGTTTACCAGCCGGGCCGAGT ATCGCCTGATGCTGCGCGAAGACAATGCCGACATGCGCCTGACCGAAAAAGGCCGCGAGCTGGGCCTGGTGGACGACGCC CGCTGGGACGCCTTCAGCCGCAAGCGCGATGCTGTTTCACGTGAAACAGAGCGGCTTCGCTCCCTCTGGGTCAATCCCCA CAATCTGCCTTTGGCCGAAGCCGAGCGGGTGCTGGGCAAATCGATCGAGCGGGAGTACAACCTGCTGGACTTGCTGCGCC GCCCCGATGTGAACTACGCCGGCCTGATGTCGCTGGAGGAGGGCAAGTACGCCAACCCCGAACTGGCAGCGGAAGCGGCC GCGAGCGACGATTTGGCCAAAAGCGTGATCGAGCAAATCGAGATCACGGCCAAGTATGCGGGGTACATCGATCTGCAAAA AACAGAGGTCGAGCGTGCCGCGCACTATGAAAACCTCAAGCTGCCCACGGATCTCGATTACCTGCAGGTGTCGGCCCTGA GTTTTGAAGCGCGCCAAACCCTGGCCAGGCACCGGCCCGAAACGCTGGGCATGGCCTCGCGGATTTCCGGCATCACACCG GCGACAGTCTCGCTGCTGCTGGTGCATCTGAAGAAAAACCTGTGGAAAAACACGGTGCCCCTGAAGACAACGGACACCTC CACCGAAAAAGCCCAAGCCTGA
Upstream 100 bases:
>100_bases CCGCGGCAGGGCGTGGCCGGTCTGGTCATCGCCCAGGCTCGGGGCAGCTCCATGGCGTACAGGCATCTGGCCTGATGGCC ACTTTATTGAAGGAGGCGTA
Downstream 100 bases:
>100_bases TGCGTGGCGGTGAGCAGGATTTGCGCGCCGGCCTGAAGGCGCTGCAACTGGAATTGACCGATAGCCAGGTCGGCCAGTTG CTGGACTACCAGGACCTGAT
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MQSPYIYPQEFDVIVVGGGHAGTEAALASARMGCKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMALATDE GGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRSRTVVLTAG TFLDGKIHVGLNNYAAGRAGDPPAVSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKCIEQPGDGMPGGTAGPVPVFSF MGGAIPHPQQMPCWITHTNERTHEIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFADKESHQIFLEPEGLTTHEIYP NGISTSLPFDIQYELVRSMAGMENAHILRPGYAIEYDYFDPRALKTTFETRAIGGLFFAGQINGTTGYEEAAAQGMFAGI NAALQCRALGGLPNDHGGAWLPRRDEAYLGVLVDDLITKGVTEPYRMFTSRAEYRLMLREDNADMRLTEKGRELGLVDDA RWDAFSRKRDAVSRETERLRSLWVNPHNLPLAEAERVLGKSIEREYNLLDLLRRPDVNYAGLMSLEEGKYANPELAAEAA ASDDLAKSVIEQIEITAKYAGYIDLQKTEVERAAHYENLKLPTDLDYLQVSALSFEARQTLARHRPETLGMASRISGITP ATVSLLLVHLKKNLWKNTVPLKTTDTSTEKAQA
Sequences:
>Translated_673_residues MQSPYIYPQEFDVIVVGGGHAGTEAALASARMGCKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMALATDE GGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRSRTVVLTAG TFLDGKIHVGLNNYAAGRAGDPPAVSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKCIEQPGDGMPGGTAGPVPVFSF MGGAIPHPQQMPCWITHTNERTHEIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFADKESHQIFLEPEGLTTHEIYP NGISTSLPFDIQYELVRSMAGMENAHILRPGYAIEYDYFDPRALKTTFETRAIGGLFFAGQINGTTGYEEAAAQGMFAGI NAALQCRALGGLPNDHGGAWLPRRDEAYLGVLVDDLITKGVTEPYRMFTSRAEYRLMLREDNADMRLTEKGRELGLVDDA RWDAFSRKRDAVSRETERLRSLWVNPHNLPLAEAERVLGKSIEREYNLLDLLRRPDVNYAGLMSLEEGKYANPELAAEAA ASDDLAKSVIEQIEITAKYAGYIDLQKTEVERAAHYENLKLPTDLDYLQVSALSFEARQTLARHRPETLGMASRISGITP ATVSLLLVHLKKNLWKNTVPLKTTDTSTEKAQA >Mature_673_residues MQSPYIYPQEFDVIVVGGGHAGTEAALASARMGCKTLLLSHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMALATDE GGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRSRTVVLTAG TFLDGKIHVGLNNYAAGRAGDPPAVSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKCIEQPGDGMPGGTAGPVPVFSF MGGAIPHPQQMPCWITHTNERTHEIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFADKESHQIFLEPEGLTTHEIYP NGISTSLPFDIQYELVRSMAGMENAHILRPGYAIEYDYFDPRALKTTFETRAIGGLFFAGQINGTTGYEEAAAQGMFAGI NAALQCRALGGLPNDHGGAWLPRRDEAYLGVLVDDLITKGVTEPYRMFTSRAEYRLMLREDNADMRLTEKGRELGLVDDA RWDAFSRKRDAVSRETERLRSLWVNPHNLPLAEAERVLGKSIEREYNLLDLLRRPDVNYAGLMSLEEGKYANPELAAEAA ASDDLAKSVIEQIEITAKYAGYIDLQKTEVERAAHYENLKLPTDLDYLQVSALSFEARQTLARHRPETLGMASRISGITP ATVSLLLVHLKKNLWKNTVPLKTTDTSTEKAQA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=654, Percent_Identity=42.3547400611621, Blast_Score=469, Evalue=1e-132, Organism=Homo sapiens, GI19882217, Length=679, Percent_Identity=40.7952871870398, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI183227703, Length=694, Percent_Identity=39.9135446685879, Blast_Score=451, Evalue=1e-126, Organism=Escherichia coli, GI2367273, Length=648, Percent_Identity=65.4320987654321, Blast_Score=846, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=666, Percent_Identity=38.2882882882883, Blast_Score=442, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6321202, Length=642, Percent_Identity=42.9906542056075, Blast_Score=484, Evalue=1e-137, Organism=Drosophila melanogaster, GI24658174, Length=657, Percent_Identity=45.662100456621, Blast_Score=517, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_POLSJ (Q12HF2)
Other databases:
- EMBL: CP000316 - RefSeq: YP_546938.1 - ProteinModelPortal: Q12HF2 - SMR: Q12HF2 - STRING: Q12HF2 - GeneID: 4011075 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_0073 - NMPDR: fig|296591.1.peg.4905 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - PhylomeDB: Q12HF2 - ProtClustDB: PRK05192 - BioCyc: PSP296591:BPRO_0073-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 74028; Mature: 74028
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSPYIYPQEFDVIVVGGGHAGTEAALASARMGCKTLLLSHNIETLGQMSCNPSIGGIGK CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCC GHLVKEVDAMGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQP CHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCC NLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAG CEEEHHHHHHHHHHCCCHHHHHHHHHHHEEECEEEEEEECCEECCEEEECCCCCCCCCCC DPPAVSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKCIEQPGDGMPGGTAGPVPVFSF CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHHHCCCCCCCCCCCCCCCHHHHH MGGAIPHPQQMPCWITHTNERTHEIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFAD HCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHC KESHQIFLEPEGLTTHEIYPNGISTSLPFDIQYELVRSMAGMENAHILRPGYAIEYDYFD CCCCEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCEEEEECCCC PRALKTTFETRAIGGLFFAGQINGTTGYEEAAAQGMFAGINAALQCRALGGLPNDHGGAW CHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCHHHCCCHHEEEEECCCCCCCCCCCC LPRRDEAYLGVLVDDLITKGVTEPYRMFTSRAEYRLMLREDNADMRLTEKGRELGLVDDA CCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCEEEECCCCEECCCCCC RWDAFSRKRDAVSRETERLRSLWVNPHNLPLAEAERVLGKSIEREYNLLDLLRRPDVNYA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH GLMSLEEGKYANPELAAEAAASDDLAKSVIEQIEITAKYAGYIDLQKTEVERAAHYENLK EEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCC LPTDLDYLQVSALSFEARQTLARHRPETLGMASRISGITPATVSLLLVHLKKNLWKNTVP CCCCCCHHHHHHHHHHHHHHHHHCCCHHHCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC LKTTDTSTEKAQA CEECCCCCHHCCC >Mature Secondary Structure MQSPYIYPQEFDVIVVGGGHAGTEAALASARMGCKTLLLSHNIETLGQMSCNPSIGGIGK CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCC GHLVKEVDAMGGAMALATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRRRLENQP CHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCC NLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRSRTVVLTAGTFLDGKIHVGLNNYAAGRAG CEEEHHHHHHHHHHCCCHHHHHHHHHHHEEECEEEEEEECCEECCEEEECCCCCCCCCCC DPPAVSLSSRLKELKLPQGRLKTGTPPRIDGRTIDFSKCIEQPGDGMPGGTAGPVPVFSF CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHHHCCCCCCCCCCCCCCCHHHHH MGGAIPHPQQMPCWITHTNERTHEIIRSGFDRSPMFTGKIDGVGPRYCPSVEDKINRFAD HCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHC KESHQIFLEPEGLTTHEIYPNGISTSLPFDIQYELVRSMAGMENAHILRPGYAIEYDYFD CCCCEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCEEEEECCCC PRALKTTFETRAIGGLFFAGQINGTTGYEEAAAQGMFAGINAALQCRALGGLPNDHGGAW CHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHCCHHHCCCHHEEEEECCCCCCCCCCCC LPRRDEAYLGVLVDDLITKGVTEPYRMFTSRAEYRLMLREDNADMRLTEKGRELGLVDDA CCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCEEEECCCCEECCCCCC RWDAFSRKRDAVSRETERLRSLWVNPHNLPLAEAERVLGKSIEREYNLLDLLRRPDVNYA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH GLMSLEEGKYANPELAAEAAASDDLAKSVIEQIEITAKYAGYIDLQKTEVERAAHYENLK EEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCC LPTDLDYLQVSALSFEARQTLARHRPETLGMASRISGITPATVSLLLVHLKKNLWKNTVP CCCCCCHHHHHHHHHHHHHHHHHCCCHHHCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC LKTTDTSTEKAQA CEECCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA