| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is nemA [H]
Identifier: 91785976
GI number: 91785976
Start: 66905
End: 68005
Strand: Reverse
Name: nemA [H]
Synonym: Bpro_0063
Alternate gene names: 91785976
Gene position: 68005-66905 (Counterclockwise)
Preceding gene: 91785982
Following gene: 91785967
Centisome position: 1.31
GC content: 68.39
Gene sequence:
>1101_bases ATGCCTTCTTTATTCGACCCCACCCAGGCCGGCGACATTCATCTGGCCAACCGCATCGTGCTGGCGCCCCTGACACGCAA CCGCGCCCCCGACGCCATTCCCACCTCGCTGATGGCCGAGTACTATGCCCAGCGCGCCAGCGGCGGCCTGCTCGTCACCG AAGCCACCGCCATCAGCCACCAGGGCCAGGGCTATGCCGATGTGCCCGGGCTCTATGGCACTGCGCAGCTCGACGGCTGG AAAGAGGTGACCCGCGCCGTGCATGAGGCCGGCGGGAAGATCGTGGTGCAGCTCTGGCATGTGGGCCGCGTCTCGCACAC CGAGTTGCAGCCGGACGGCGGCCAGCCGGTCGCGCCGTCCGCCATCACCGCCAGGACCAAGACCGTGCTGCTCAAGGACG GCGCGCCCACCTTTGTCGCCACCTCCGAGCCGCGCGCACTGCGGGCCGACGAACTGCCCGGCATCGTGCATGCCTATGAA GCCGCGGCGCGCAATGCGGTCGAAACCGCTGGCTTTGACGGCGTCGAAGTCCACGGCGCCAACGGCTACCTGCTCGACCA GTTCCTCAAGCGGGGCTCCAACCAGCGCACCGACGACTACGGCGGCAGCATCGAGAACCGCGCGCGCCTGCTGCTCGAGG TCACGCGCGCCGTCACCGGCGCGATCGGCGGCGGACGCACCGGCATTCGCCTGTCGCCGGTGACACCGGCCAACGATGTG CATGACGCCGATCCGCAGCCGCTGTTCGACTACGTGGTGCGCCAGCTCGCCACGCTGAACCTGGCCTATATCCACATCAT CGAAGGCGCGACCGGCGGGCCGCGCGAAATCGCCGACCGGCCGTTCGACTATGCCGCGCTCAAGACCGCCTACCGCGAAG CCGGCGGCAAGGGCGCCTGGATGGTCAACAACGGCTACGACCAGGCACTGGCCAAGCAGGCGGTGGCGAACGGCGCCGAC CTGATCGCCTTTGGCAAGCCCTACATCGCCAACCCGGATCTGGTGGAGCGCCTGCGCCGCAATGCGCCGCTCAACCTGCC CGACCAGGCCACCTTTTATGGCGGCGGCGCCAAGGGTTATACGGACTACCCAACGCTATAA
Upstream 100 bases:
>100_bases ACGCCAATTCAGATCGGCACACACTGACGCCTGCTCACTCTTCCTGTTTCCTGTTTCCTGTTTCATCTTCCCGATTCATC TTTTCAACCCGGACACTTTC
Downstream 100 bases:
>100_bases AACCAGACCGCATGCCAGTCATGCATGACTGGCAATGGTTTCAGGGCTTTCTTATTTAAACGAGGCCCTGGCACAGGTAT TTGGTGTGCATGTAGTCTTC
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MPSLFDPTQAGDIHLANRIVLAPLTRNRAPDAIPTSLMAEYYAQRASGGLLVTEATAISHQGQGYADVPGLYGTAQLDGW KEVTRAVHEAGGKIVVQLWHVGRVSHTELQPDGGQPVAPSAITARTKTVLLKDGAPTFVATSEPRALRADELPGIVHAYE AAARNAVETAGFDGVEVHGANGYLLDQFLKRGSNQRTDDYGGSIENRARLLLEVTRAVTGAIGGGRTGIRLSPVTPANDV HDADPQPLFDYVVRQLATLNLAYIHIIEGATGGPREIADRPFDYAALKTAYREAGGKGAWMVNNGYDQALAKQAVANGAD LIAFGKPYIANPDLVERLRRNAPLNLPDQATFYGGGAKGYTDYPTL
Sequences:
>Translated_366_residues MPSLFDPTQAGDIHLANRIVLAPLTRNRAPDAIPTSLMAEYYAQRASGGLLVTEATAISHQGQGYADVPGLYGTAQLDGW KEVTRAVHEAGGKIVVQLWHVGRVSHTELQPDGGQPVAPSAITARTKTVLLKDGAPTFVATSEPRALRADELPGIVHAYE AAARNAVETAGFDGVEVHGANGYLLDQFLKRGSNQRTDDYGGSIENRARLLLEVTRAVTGAIGGGRTGIRLSPVTPANDV HDADPQPLFDYVVRQLATLNLAYIHIIEGATGGPREIADRPFDYAALKTAYREAGGKGAWMVNNGYDQALAKQAVANGAD LIAFGKPYIANPDLVERLRRNAPLNLPDQATFYGGGAKGYTDYPTL >Mature_365_residues PSLFDPTQAGDIHLANRIVLAPLTRNRAPDAIPTSLMAEYYAQRASGGLLVTEATAISHQGQGYADVPGLYGTAQLDGWK EVTRAVHEAGGKIVVQLWHVGRVSHTELQPDGGQPVAPSAITARTKTVLLKDGAPTFVATSEPRALRADELPGIVHAYEA AARNAVETAGFDGVEVHGANGYLLDQFLKRGSNQRTDDYGGSIENRARLLLEVTRAVTGAIGGGRTGIRLSPVTPANDVH DADPQPLFDYVVRQLATLNLAYIHIIEGATGGPREIADRPFDYAALKTAYREAGGKGAWMVNNGYDQALAKQAVANGADL IAFGKPYIANPDLVERLRRNAPLNLPDQATFYGGGAKGYTDYPTL
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=369, Percent_Identity=48.5094850948509, Blast_Score=304, Evalue=5e-84, Organism=Escherichia coli, GI1789463, Length=226, Percent_Identity=34.9557522123894, Blast_Score=108, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17559802, Length=354, Percent_Identity=27.9661016949153, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17559804, Length=269, Percent_Identity=27.1375464684015, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI72001454, Length=267, Percent_Identity=28.0898876404494, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17565138, Length=298, Percent_Identity=28.1879194630872, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17540738, Length=136, Percent_Identity=35.2941176470588, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17564188, Length=274, Percent_Identity=26.2773722627737, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17566914, Length=234, Percent_Identity=26.4957264957265, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325086, Length=385, Percent_Identity=37.9220779220779, Blast_Score=211, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6321973, Length=381, Percent_Identity=37.7952755905512, Blast_Score=207, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39002; Mature: 38871
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLFDPTQAGDIHLANRIVLAPLTRNRAPDAIPTSLMAEYYAQRASGGLLVTEATAISH CCCCCCCCCCCCEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHC QGQGYADVPGLYGTAQLDGWKEVTRAVHEAGGKIVVQLWHVGRVSHTELQPDGGQPVAPS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCEECCCCCCCCCCC AITARTKTVLLKDGAPTFVATSEPRALRADELPGIVHAYEAAARNAVETAGFDGVEVHGA HHEECEEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC NGYLLDQFLKRGSNQRTDDYGGSIENRARLLLEVTRAVTGAIGGGRTGIRLSPVTPANDV CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCC HDADPQPLFDYVVRQLATLNLAYIHIIEGATGGPREIADRPFDYAALKTAYREAGGKGAW CCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEE MVNNGYDQALAKQAVANGADLIAFGKPYIANPDLVERLRRNAPLNLPDQATFYGGGAKGY EEECCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCC TDYPTL CCCCCC >Mature Secondary Structure PSLFDPTQAGDIHLANRIVLAPLTRNRAPDAIPTSLMAEYYAQRASGGLLVTEATAISH CCCCCCCCCCCEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHC QGQGYADVPGLYGTAQLDGWKEVTRAVHEAGGKIVVQLWHVGRVSHTELQPDGGQPVAPS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCEECCCCCCCCCCC AITARTKTVLLKDGAPTFVATSEPRALRADELPGIVHAYEAAARNAVETAGFDGVEVHGA HHEECEEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC NGYLLDQFLKRGSNQRTDDYGGSIENRARLLLEVTRAVTGAIGGGRTGIRLSPVTPANDV CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCC HDADPQPLFDYVVRQLATLNLAYIHIIEGATGGPREIADRPFDYAALKTAYREAGGKGAW CCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHCCCCEEE MVNNGYDQALAKQAVANGADLIAFGKPYIANPDLVERLRRNAPLNLPDQATFYGGGAKGY EEECCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCC TDYPTL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]