| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785982
Identifier: 91785982
GI number: 91785982
Start: 72477
End: 73247
Strand: Reverse
Name: 91785982
Synonym: Bpro_0069
Alternate gene names: NA
Gene position: 73247-72477 (Counterclockwise)
Preceding gene: 91785983
Following gene: 91785976
Centisome position: 1.41
GC content: 64.46
Gene sequence:
>771_bases GTGAACATCCCATCCCTGAAAAAAACCGTCAGCGCCGAGGAATGGCAGTTGCGCTGCGACCTCGCCGCCTGCTACCGCCT GGTAGCGCTCTATGGCTGGAGCGACCTGGTGTTCACCCACATCAGCGCCAAGCTGCCAGAGGAGGTAGCAGGCCCGGGCG CGCACCACTTCCTGATCAACCCCTACGGCCTGATGTTCGACGAGATCACCGCCTCCAGCCTGGTCAAGGTCGACGGGCAG TGCAACAAAGTCATTGACTCGCCCTTCCCGGTCAACCCGGCCGGTTTCGTGATTCACAGCGCGGTGCACGACGCCCGGCC CGACGCCGGCTGCGTGCTGCACACCCACACGCGCGCCGGCGTCGCGGTCAGTGCGCAAAAGTGCGGCGTGCTGCCGATCA GCCAGCAGTCCACCTTTGTGCTGGCCTCGCTGGCCTACCACGACTACGAGGGCGTCGCCTTTCGCGGCGAGGAAAGGCCG CGCCTGCAGGCCGATCTGGGGTCCGCCAATTTTTTGATGCTGCGCAACCATGGCCTGCTGGTGGTGGGCAAGACCATTGC CGACGCCTTTTTGAACATGTACATATTTGAAAACACCTGCCGCATCCAGCTCGACGCGCAGGCCGGCGGCGAACTCATCC TGGTCAATCCGCAGATCATCCAGGGCGTGTCGGAAGCCCTGCGCGTGCAGACGGGCGGCATGGGCGGCGCCTTTGCCTGG CCCTCGCTGATCCGCAGGCTGGAGCGGCTGGACGACAGCTACCGCACATAA
Upstream 100 bases:
>100_bases ACGCTGATGAAAGTTCAATTTCTGACAATTGCACGTGCCGCACAGGCGTATCGTACAAAGCCAGGCCTTTTTAAAAAACA ACCCGCCAGGAGACAACCCC
Downstream 100 bases:
>100_bases ACTGCCCCCACCCGGCTTGTGCAAGGCGACCGCCAGGGACTTCCTCCAGGGGGCTTGCAAGGGCCTCTAAGTACTGACCA GGGAAAGCATCGGCGGATGC
Product: class II aldolase/adducin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MNIPSLKKTVSAEEWQLRCDLAACYRLVALYGWSDLVFTHISAKLPEEVAGPGAHHFLINPYGLMFDEITASSLVKVDGQ CNKVIDSPFPVNPAGFVIHSAVHDARPDAGCVLHTHTRAGVAVSAQKCGVLPISQQSTFVLASLAYHDYEGVAFRGEERP RLQADLGSANFLMLRNHGLLVVGKTIADAFLNMYIFENTCRIQLDAQAGGELILVNPQIIQGVSEALRVQTGGMGGAFAW PSLIRRLERLDDSYRT
Sequences:
>Translated_256_residues MNIPSLKKTVSAEEWQLRCDLAACYRLVALYGWSDLVFTHISAKLPEEVAGPGAHHFLINPYGLMFDEITASSLVKVDGQ CNKVIDSPFPVNPAGFVIHSAVHDARPDAGCVLHTHTRAGVAVSAQKCGVLPISQQSTFVLASLAYHDYEGVAFRGEERP RLQADLGSANFLMLRNHGLLVVGKTIADAFLNMYIFENTCRIQLDAQAGGELILVNPQIIQGVSEALRVQTGGMGGAFAW PSLIRRLERLDDSYRT >Mature_256_residues MNIPSLKKTVSAEEWQLRCDLAACYRLVALYGWSDLVFTHISAKLPEEVAGPGAHHFLINPYGLMFDEITASSLVKVDGQ CNKVIDSPFPVNPAGFVIHSAVHDARPDAGCVLHTHTRAGVAVSAQKCGVLPISQQSTFVLASLAYHDYEGVAFRGEERP RLQADLGSANFLMLRNHGLLVVGKTIADAFLNMYIFENTCRIQLDAQAGGELILVNPQIIQGVSEALRVQTGGMGGAFAW PSLIRRLERLDDSYRT
Specific function: Unknown
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldolase class II family [H]
Homologues:
Organism=Homo sapiens, GI29826323, Length=259, Percent_Identity=42.8571428571429, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI29826319, Length=259, Percent_Identity=42.8571428571429, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI29826325, Length=259, Percent_Identity=42.8571428571429, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI29826321, Length=259, Percent_Identity=42.8571428571429, Blast_Score=185, Evalue=3e-47, Organism=Homo sapiens, GI9943848, Length=256, Percent_Identity=39.0625, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI9951927, Length=256, Percent_Identity=39.0625, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI62912453, Length=256, Percent_Identity=39.0625, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI9257190, Length=255, Percent_Identity=37.2549019607843, Blast_Score=153, Evalue=1e-37, Organism=Homo sapiens, GI297307158, Length=207, Percent_Identity=40.5797101449275, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI9257192, Length=207, Percent_Identity=40.5797101449275, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI89276787, Length=255, Percent_Identity=37.2549019607843, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI297307160, Length=255, Percent_Identity=37.2549019607843, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI115533216, Length=230, Percent_Identity=40, Blast_Score=161, Evalue=3e-40, Organism=Caenorhabditis elegans, GI115533218, Length=230, Percent_Identity=40, Blast_Score=161, Evalue=4e-40, Organism=Caenorhabditis elegans, GI71989555, Length=259, Percent_Identity=34.3629343629344, Blast_Score=128, Evalue=4e-30, Organism=Caenorhabditis elegans, GI71989541, Length=259, Percent_Identity=34.3629343629344, Blast_Score=127, Evalue=4e-30, Organism=Caenorhabditis elegans, GI71989544, Length=259, Percent_Identity=34.3629343629344, Blast_Score=127, Evalue=4e-30, Organism=Caenorhabditis elegans, GI71989560, Length=259, Percent_Identity=34.3629343629344, Blast_Score=127, Evalue=4e-30, Organism=Caenorhabditis elegans, GI71989550, Length=259, Percent_Identity=34.3629343629344, Blast_Score=127, Evalue=4e-30, Organism=Drosophila melanogaster, GI281363755, Length=217, Percent_Identity=38.7096774193548, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI281363751, Length=217, Percent_Identity=38.7096774193548, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI24655690, Length=217, Percent_Identity=38.7096774193548, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI281363761, Length=191, Percent_Identity=41.3612565445026, Blast_Score=131, Evalue=3e-31, Organism=Drosophila melanogaster, GI281363759, Length=191, Percent_Identity=41.3612565445026, Blast_Score=131, Evalue=3e-31, Organism=Drosophila melanogaster, GI281363753, Length=191, Percent_Identity=41.3612565445026, Blast_Score=131, Evalue=3e-31, Organism=Drosophila melanogaster, GI24655685, Length=191, Percent_Identity=41.3612565445026, Blast_Score=131, Evalue=3e-31, Organism=Drosophila melanogaster, GI281363763, Length=217, Percent_Identity=38.7096774193548, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI281363757, Length=217, Percent_Identity=38.7096774193548, Blast_Score=131, Evalue=5e-31, Organism=Drosophila melanogaster, GI17136738, Length=217, Percent_Identity=38.7096774193548, Blast_Score=131, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 [H]
Pfam domain/function: PF00596 Aldolase_II [H]
EC number: NA
Molecular weight: Translated: 27934; Mature: 27934
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPSLKKTVSAEEWQLRCDLAACYRLVALYGWSDLVFTHISAKLPEEVAGPGAHHFLIN CCCCCHHHHCCCCHHEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCCCEEEEC PYGLMFDEITASSLVKVDGQCNKVIDSPFPVNPAGFVIHSAVHDARPDAGCVLHTHTRAG CHHHHHHHHHHHHEEEECCCCCHHCCCCCCCCCHHHEEEHHHHHCCCCCCEEEEECCCCC VAVSAQKCGVLPISQQSTFVLASLAYHDYEGVAFRGEERPRLQADLGSANFLMLRNHGLL EEEECCCCCCEEECCCCEEEEEEEHHCCCCCEEEECCCCCCEEECCCCCEEEEEECCCEE VVGKTIADAFLNMYIFENTCRIQLDAQAGGELILVNPQIIQGVSEALRVQTGGMGGAFAW EEEHHHHHHHHHHHEECCEEEEEEECCCCCCEEEECHHHHHHHHHHHHEECCCCCCHHHH PSLIRRLERLDDSYRT HHHHHHHHHHHHHCCC >Mature Secondary Structure MNIPSLKKTVSAEEWQLRCDLAACYRLVALYGWSDLVFTHISAKLPEEVAGPGAHHFLIN CCCCCHHHHCCCCHHEEEECHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCCCEEEEC PYGLMFDEITASSLVKVDGQCNKVIDSPFPVNPAGFVIHSAVHDARPDAGCVLHTHTRAG CHHHHHHHHHHHHEEEECCCCCHHCCCCCCCCCHHHEEEHHHHHCCCCCCEEEEECCCCC VAVSAQKCGVLPISQQSTFVLASLAYHDYEGVAFRGEERPRLQADLGSANFLMLRNHGLL EEEECCCCCCEEECCCCEEEEEEEHHCCCCCEEEECCCCCCEEECCCCCEEEEEECCCEE VVGKTIADAFLNMYIFENTCRIQLDAQAGGELILVNPQIIQGVSEALRVQTGGMGGAFAW EEEHHHHHHHHHHHEECCEEEEEEECCCCCCEEEECHHHHHHHHHHHHEECCCCCCHHHH PSLIRRLERLDDSYRT HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]