| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785969
Identifier: 91785969
GI number: 91785969
Start: 57853
End: 58518
Strand: Direct
Name: 91785969
Synonym: Bpro_0056
Alternate gene names: NA
Gene position: 57853-58518 (Clockwise)
Preceding gene: 91785968
Following gene: 91785970
Centisome position: 1.11
GC content: 59.31
Gene sequence:
>666_bases ATGACCTTCCGCCCGAAATTCATTACCTTTGACTGCTACGGCACCCTGACACGTTTTCGCATGGGCGATATGGCGCGCGA GATGTTTGCCGACCGCATCCCGGCCGCGCAGATGGAGCTGTTTGTCGCCGACTTCAGCGCCTACCGTTTTGACGAAGTGC TGGGCGCCTGGAAGCCTTATGCCGATGTGCTCAGGAACGCCTTGAACCGCACCTGCAAAAAATGGAACATCAAGTGCACC GACGCCGAAGGCCGGGCTTACTACGACGCCGTGCCGACCTGGGGCCCGCATGCCGATGTGCCGGCCGGCCTGTCGCGCAT CGCCGACAAGATTCCGCTGGTCATTCTTTCCAACGCGTCCAACGACCAGATACACAAGAACGTAGACAAGCTCGGTGCGC CATTTCATCGTGTTTTCACCGCTCAGCAGGCCCAGGCTTACAAGCCGCGTCTGCAGGCCTTTGAGTACATGCTGGACCAG CTCGGTTGCGGTCCTGAAGACATCCTGCACGTGTCGTCCAGCCTGCGTTACGACCTGATGTCGGCTGATGACCTGGGCAT CAAGAACAAGGTGTTCGTCAATCGCGGTCATGGTCCTGGCAACCCGGCGTACAACTACGTCGAGATCCAGGACATCGGCG GCTTGCCCGGTGTGGTCGGCCTTTAA
Upstream 100 bases:
>100_bases TTATGCCCATGTTTCAATGACGTCATCGTGACAGGCGAATAAGCGCATCGTTTAAACATCTAAAACCTTTTTTCCAACCT TTATAGACAGGATTGCAGAC
Downstream 100 bases:
>100_bases TTTTTGACACGGCGGATATGAAACTCCACTCCTACTGGACCGACAGCGCCCCGCTGTTTGCGCCCGCGCAAGAGGCCTTG CCGGCCCGTGCCGACGTGGT
Product: haloacid dehalogenase
Products: NA
Alternate protein names: HAD Family Hydrolase; Hydrolase; Haloalkanoic Acid Dehalogenase; Dehalogenase; 2-Haloacid Dehalogenase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase; Haloacid Dehalogenase I; 2-Haloalkanoic Acid Dehalogenase; Haloacid Dehydrogenase; 2-Haloacid Halidohydrolase Type II; Haloacid Dehalogenase Type II Truncated; 2-Haloacid Halidohydrolase IVa; 2-Haloacid Halidohydrolase IVA; Dehalogenase Protein; HAD Superfamily Haloalkanoic Acid Dehalogenase
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTFRPKFITFDCYGTLTRFRMGDMAREMFADRIPAAQMELFVADFSAYRFDEVLGAWKPYADVLRNALNRTCKKWNIKCT DAEGRAYYDAVPTWGPHADVPAGLSRIADKIPLVILSNASNDQIHKNVDKLGAPFHRVFTAQQAQAYKPRLQAFEYMLDQ LGCGPEDILHVSSSLRYDLMSADDLGIKNKVFVNRGHGPGNPAYNYVEIQDIGGLPGVVGL
Sequences:
>Translated_221_residues MTFRPKFITFDCYGTLTRFRMGDMAREMFADRIPAAQMELFVADFSAYRFDEVLGAWKPYADVLRNALNRTCKKWNIKCT DAEGRAYYDAVPTWGPHADVPAGLSRIADKIPLVILSNASNDQIHKNVDKLGAPFHRVFTAQQAQAYKPRLQAFEYMLDQ LGCGPEDILHVSSSLRYDLMSADDLGIKNKVFVNRGHGPGNPAYNYVEIQDIGGLPGVVGL >Mature_220_residues TFRPKFITFDCYGTLTRFRMGDMAREMFADRIPAAQMELFVADFSAYRFDEVLGAWKPYADVLRNALNRTCKKWNIKCTD AEGRAYYDAVPTWGPHADVPAGLSRIADKIPLVILSNASNDQIHKNVDKLGAPFHRVFTAQQAQAYKPRLQAFEYMLDQL GCGPEDILHVSSSLRYDLMSADDLGIKNKVFVNRGHGPGNPAYNYVEIQDIGGLPGVVGL
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24772; Mature: 24640
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFRPKFITFDCYGTLTRFRMGDMAREMFADRIPAAQMELFVADFSAYRFDEVLGAWKPY CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHH ADVLRNALNRTCKKWNIKCTDAEGRAYYDAVPTWGPHADVPAGLSRIADKIPLVILSNAS HHHHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEECCC NDQIHKNVDKLGAPFHRVFTAQQAQAYKPRLQAFEYMLDQLGCGPEDILHVSSSLRYDLM CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEECC SADDLGIKNKVFVNRGHGPGNPAYNYVEIQDIGGLPGVVGL CCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure TFRPKFITFDCYGTLTRFRMGDMAREMFADRIPAAQMELFVADFSAYRFDEVLGAWKPY CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHH ADVLRNALNRTCKKWNIKCTDAEGRAYYDAVPTWGPHADVPAGLSRIADKIPLVILSNAS HHHHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEECCC NDQIHKNVDKLGAPFHRVFTAQQAQAYKPRLQAFEYMLDQLGCGPEDILHVSSSLRYDLM CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEECC SADDLGIKNKVFVNRGHGPGNPAYNYVEIQDIGGLPGVVGL CCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA