Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ordL [H]

Identifier: 91785970

GI number: 91785970

Start: 58536

End: 59825

Strand: Direct

Name: ordL [H]

Synonym: Bpro_0057

Alternate gene names: 91785970

Gene position: 58536-59825 (Clockwise)

Preceding gene: 91785969

Following gene: 91785971

Centisome position: 1.13

GC content: 64.57

Gene sequence:

>1290_bases
ATGAAACTCCACTCCTACTGGACCGACAGCGCCCCGCTGTTTGCGCCCGCGCAAGAGGCCTTGCCGGCCCGTGCCGACGT
GGTGATTGTGGGCGGTGGGTTTACCGGCCTGTCCGCCGCGCTGGCCCTGGCCAGGCGCGGCGCCAAGGTCGTGGTGCTTG
AAGCCGGCGCTGTGGCCGGCGAAGCATCGGGCCGCAACGGCGGCCACGTCAATAACGGCCTGGCGGTGGACTACGCGCTG
CTGGCCGAACGTGTCGGTAGCGAAAAAGCCGGCGACTGGTACCGCGCTTATGATGCGGCGGTCAATACCGTGGCCCAAGT
GGTCCGCGATGAAAACATAGACTGTTATTTCGAGCGCAACGGCAAACTCAAGCTGGCTTCGCGCCCCGCACATTACGACA
CGCTGGCGCGCGGCCTGGACCGCCTGCGCCGCGAGGTCGATGCCGATGTGGAATTGCTCAACGCGTCCCAGGTCAGGCAG
GAAGTCGATAGCGACAAGTTTTACGGCGGGCTGCTGCAAAAACGCAGCGGGCAAATGCACATGGGCCGTTTTGCCGTGGG
CCTGGCGCAAGCGGCGATCAAACACGGCGCGCAGATCCATGCGCGGACGCCGGCCATGAAGCTGGAACGCATCACTTCCA
CCGGCCATGCGCACCGTGTGCATACCGCGCGCGGCGTGATTGAGGCGGCGCAAGTGCTGGTCGCCACGGGCGCCACGTTG
CACGGCAACTACGGCAGCTTCGGTTTCTGGCGCCGGCGCATTGTGCCTATAGGCAGTTTTATCATCACCACCGAATCGCT
GGGACGCGAGCGCGCGCTCAAGGTTTTGTCGGGCCGCCGCACCTACACGACGACGGCCAATATCCATAACTATTTCCGCC
TCACGCACGACGACCGGCTGGTCTTTGGCGGGCGGGCGCGGTTTGCGATGTCAAGCCCGCAGTCGGACGCCAAAAGTGGC
CTCATCCTGCAGCAGGCGCTGGCGCAGATGTTTCCTCAGCTCGGCGATGCGCGCATCGACTACTGCTGGGGCGGCCTGGT
CGATATGACGCAAGACCGGCTGCCGCACGCAGGTCAGCACAACGGTTTGTATTACTCGATGGGTTACAGCGGCCACGGTA
CGCAGATGTCGGTGCACATGGGCCAGTGCATGGCGCGTGTGATGGGCGGCGAGGTTTCGGCCAACCCCTGGCGCGACCTG
CGCTGGCCGGCGATTCCGGGCCACTTCGGGCCGCCCTGGTTTTTGCCCGCGATCGGCCTGTACTACCGCATCAAAGACAA
ATTGCTCTGA

Upstream 100 bases:

>100_bases
GCGGTCATGGTCCTGGCAACCCGGCGTACAACTACGTCGAGATCCAGGACATCGGCGGCTTGCCCGGTGTGGTCGGCCTT
TAATTTTTGACACGGCGGAT

Downstream 100 bases:

>100_bases
TCTTTTTTAGTTGTTATCGACCCACCACCCAGGAGAACTGCCATGAATGAAAGCAAGAAACTGCAAGCCTTGATCGGCCC
CCAGGAAAGCATGCGCGTGA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MKLHSYWTDSAPLFAPAQEALPARADVVIVGGGFTGLSAALALARRGAKVVVLEAGAVAGEASGRNGGHVNNGLAVDYAL
LAERVGSEKAGDWYRAYDAAVNTVAQVVRDENIDCYFERNGKLKLASRPAHYDTLARGLDRLRREVDADVELLNASQVRQ
EVDSDKFYGGLLQKRSGQMHMGRFAVGLAQAAIKHGAQIHARTPAMKLERITSTGHAHRVHTARGVIEAAQVLVATGATL
HGNYGSFGFWRRRIVPIGSFIITTESLGRERALKVLSGRRTYTTTANIHNYFRLTHDDRLVFGGRARFAMSSPQSDAKSG
LILQQALAQMFPQLGDARIDYCWGGLVDMTQDRLPHAGQHNGLYYSMGYSGHGTQMSVHMGQCMARVMGGEVSANPWRDL
RWPAIPGHFGPPWFLPAIGLYYRIKDKLL

Sequences:

>Translated_429_residues
MKLHSYWTDSAPLFAPAQEALPARADVVIVGGGFTGLSAALALARRGAKVVVLEAGAVAGEASGRNGGHVNNGLAVDYAL
LAERVGSEKAGDWYRAYDAAVNTVAQVVRDENIDCYFERNGKLKLASRPAHYDTLARGLDRLRREVDADVELLNASQVRQ
EVDSDKFYGGLLQKRSGQMHMGRFAVGLAQAAIKHGAQIHARTPAMKLERITSTGHAHRVHTARGVIEAAQVLVATGATL
HGNYGSFGFWRRRIVPIGSFIITTESLGRERALKVLSGRRTYTTTANIHNYFRLTHDDRLVFGGRARFAMSSPQSDAKSG
LILQQALAQMFPQLGDARIDYCWGGLVDMTQDRLPHAGQHNGLYYSMGYSGHGTQMSVHMGQCMARVMGGEVSANPWRDL
RWPAIPGHFGPPWFLPAIGLYYRIKDKLL
>Mature_429_residues
MKLHSYWTDSAPLFAPAQEALPARADVVIVGGGFTGLSAALALARRGAKVVVLEAGAVAGEASGRNGGHVNNGLAVDYAL
LAERVGSEKAGDWYRAYDAAVNTVAQVVRDENIDCYFERNGKLKLASRPAHYDTLARGLDRLRREVDADVELLNASQVRQ
EVDSDKFYGGLLQKRSGQMHMGRFAVGLAQAAIKHGAQIHARTPAMKLERITSTGHAHRVHTARGVIEAAQVLVATGATL
HGNYGSFGFWRRRIVPIGSFIITTESLGRERALKVLSGRRTYTTTANIHNYFRLTHDDRLVFGGRARFAMSSPQSDAKSG
LILQQALAQMFPQLGDARIDYCWGGLVDMTQDRLPHAGQHNGLYYSMGYSGHGTQMSVHMGQCMARVMGGEVSANPWRDL
RWPAIPGHFGPPWFLPAIGLYYRIKDKLL

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787559, Length=434, Percent_Identity=31.1059907834101, Blast_Score=175, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 46922; Mature: 46922

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHSYWTDSAPLFAPAQEALPARADVVIVGGGFTGLSAALALARRGAKVVVLEAGAVAG
CCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCEEC
EASGRNGGHVNNGLAVDYALLAERVGSEKAGDWYRAYDAAVNTVAQVVRDENIDCYFERN
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECC
GKLKLASRPAHYDTLARGLDRLRREVDADVELLNASQVRQEVDSDKFYGGLLQKRSGQMH
CEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHCCHHHHHHHHHHCCCCCC
MGRFAVGLAQAAIKHGAQIHARTPAMKLERITSTGHAHRVHTARGVIEAAQVLVATGATL
HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEE
HGNYGSFGFWRRRIVPIGSFIITTESLGRERALKVLSGRRTYTTTANIHNYFRLTHDDRL
ECCCCCHHHHHHHHEECCCEEEEEHHHCHHHHHHHHCCCCEEEEEECCCEEEEEECCCEE
VFGGRARFAMSSPQSDAKSGLILQQALAQMFPQLGDARIDYCWGGLVDMTQDRLPHAGQH
EECCCEEEEECCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEHHCCHHHHHHHHCCCCCCC
NGLYYSMGYSGHGTQMSVHMGQCMARVMGGEVSANPWRDLRWPAIPGHFGPPWFLPAIGL
CCEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
YYRIKDKLL
HHHHHHHCC
>Mature Secondary Structure
MKLHSYWTDSAPLFAPAQEALPARADVVIVGGGFTGLSAALALARRGAKVVVLEAGAVAG
CCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCEEC
EASGRNGGHVNNGLAVDYALLAERVGSEKAGDWYRAYDAAVNTVAQVVRDENIDCYFERN
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECC
GKLKLASRPAHYDTLARGLDRLRREVDADVELLNASQVRQEVDSDKFYGGLLQKRSGQMH
CEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHCCHHHHHHHHHHCCCCCC
MGRFAVGLAQAAIKHGAQIHARTPAMKLERITSTGHAHRVHTARGVIEAAQVLVATGATL
HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEE
HGNYGSFGFWRRRIVPIGSFIITTESLGRERALKVLSGRRTYTTTANIHNYFRLTHDDRL
ECCCCCHHHHHHHHEECCCEEEEEHHHCHHHHHHHHCCCCEEEEEECCCEEEEEECCCEE
VFGGRARFAMSSPQSDAKSGLILQQALAQMFPQLGDARIDYCWGGLVDMTQDRLPHAGQH
EECCCEEEEECCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEHHCCHHHHHHHHCCCCCCC
NGLYYSMGYSGHGTQMSVHMGQCMARVMGGEVSANPWRDLRWPAIPGHFGPPWFLPAIGL
CCEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
YYRIKDKLL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]