| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785958
Identifier: 91785958
GI number: 91785958
Start: 47348
End: 48058
Strand: Reverse
Name: 91785958
Synonym: Bpro_0045
Alternate gene names: NA
Gene position: 48058-47348 (Counterclockwise)
Preceding gene: 91785959
Following gene: 91785957
Centisome position: 0.92
GC content: 63.43
Gene sequence:
>711_bases ATGTCCCTGCAAGACTTTAAAGTGCTGACCTTTGATGTGGTCGGCACGCTGATCGATTTTGAGCGCGGCATGCTCGACTA CCTGCACCGCGCCGTGCCCGATGCGGCCGTCAGCGACGACGACTTCCTGGCCCTGTACCGCAAGGCGCGCGCCGACGAAG TCACAGGCCTGTTCCCCGACGACCTGGTGCGCGTCTGGCACCAGATCGCGCCGGCGCTGGGCCTGCCCGACACCGAAGCC CTGGCCGAGGGCCTGCGCGACTCCGCCGCGCAATGGCCGGCCTTTGCCGATTCGGTAGAAGCGCTGAAACGCCTGTCCAA ACACTTCAAGCTGGTCGCCATGACCAATGCCCAGCAATGGGCGCTGACGCATTTCGAACGCACGCTGGGCCTGCCTTTTG ACGACACGGTGTGCGTCGACGACGCCCAATGCGAAAAACCCGATCCGAAGTTTTTTGCCTTTGCGCGCGCCAAGCTCGCC ATCCACGGTTTTACCCAGGCCGACAACCTGCACACGGCGCAAAGCCAGTACCACGACATCGGCATCGCCAAAAGCCTGGG CCTGGCCACTTGCTGGATCGAAAGGCGCCATGGCCAGCCCGGTTTCGGCGGCACGCTGGCCGTCAAACACATCACCCAAC CCGACTACCACTACTTCACGCTGGCACAGCTTGCCGATGCGGTGGAAGCCAACGCCAGCACCACTGCCTGA
Upstream 100 bases:
>100_bases GCCACCACCATTTTTCCGGGCACGCCGGCATGGCCGCCTGAAGCCTCGGTTTTACCCCGGTTTTATATTCCATTGATTGA CAACGTTTTAGGAGTTTTCC
Downstream 100 bases:
>100_bases GCAGGATGCACATGCACGCCGAGCTTGCCGATTTGTTGCCCGGGCTGGTGAGCTTGCGGCGCGACCTGCACGCCCATCCC GAGCTGGCTTTTACCGAGCA
Product: HAD family hydrolase
Products: NA
Alternate protein names: Haloacid Dehalogenase Type II; 2-Haloalkanoic Acid Dehalogenase; HAD-Superfamily Hydrolase; Hydrolase; 2-Haloacid Dehalogenase; Haloacid Dehalogenase I; 2-Haloacid Dehalogenase Protein; 2-Haloalkanoic Acid Dehalogenase Protein; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSLQDFKVLTFDVVGTLIDFERGMLDYLHRAVPDAAVSDDDFLALYRKARADEVTGLFPDDLVRVWHQIAPALGLPDTEA LAEGLRDSAAQWPAFADSVEALKRLSKHFKLVAMTNAQQWALTHFERTLGLPFDDTVCVDDAQCEKPDPKFFAFARAKLA IHGFTQADNLHTAQSQYHDIGIAKSLGLATCWIERRHGQPGFGGTLAVKHITQPDYHYFTLAQLADAVEANASTTA
Sequences:
>Translated_236_residues MSLQDFKVLTFDVVGTLIDFERGMLDYLHRAVPDAAVSDDDFLALYRKARADEVTGLFPDDLVRVWHQIAPALGLPDTEA LAEGLRDSAAQWPAFADSVEALKRLSKHFKLVAMTNAQQWALTHFERTLGLPFDDTVCVDDAQCEKPDPKFFAFARAKLA IHGFTQADNLHTAQSQYHDIGIAKSLGLATCWIERRHGQPGFGGTLAVKHITQPDYHYFTLAQLADAVEANASTTA >Mature_235_residues SLQDFKVLTFDVVGTLIDFERGMLDYLHRAVPDAAVSDDDFLALYRKARADEVTGLFPDDLVRVWHQIAPALGLPDTEAL AEGLRDSAAQWPAFADSVEALKRLSKHFKLVAMTNAQQWALTHFERTLGLPFDDTVCVDDAQCEKPDPKFFAFARAKLAI HGFTQADNLHTAQSQYHDIGIAKSLGLATCWIERRHGQPGFGGTLAVKHITQPDYHYFTLAQLADAVEANASTTA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26116; Mature: 25984
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQDFKVLTFDVVGTLIDFERGMLDYLHRAVPDAAVSDDDFLALYRKARADEVTGLFPD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHH DLVRVWHQIAPALGLPDTEALAEGLRDSAAQWPAFADSVEALKRLSKHFKLVAMTNAQQW HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCHHH ALTHFERTLGLPFDDTVCVDDAQCEKPDPKFFAFARAKLAIHGFTQADNLHTAQSQYHDI HHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHH GIAKSLGLATCWIERRHGQPGFGGTLAVKHITQPDYHYFTLAQLADAVEANASTTA HHHHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SLQDFKVLTFDVVGTLIDFERGMLDYLHRAVPDAAVSDDDFLALYRKARADEVTGLFPD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHH DLVRVWHQIAPALGLPDTEALAEGLRDSAAQWPAFADSVEALKRLSKHFKLVAMTNAQQW HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCHHH ALTHFERTLGLPFDDTVCVDDAQCEKPDPKFFAFARAKLAIHGFTQADNLHTAQSQYHDI HHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHH GIAKSLGLATCWIERRHGQPGFGGTLAVKHITQPDYHYFTLAQLADAVEANASTTA HHHHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA