| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91785955
Identifier: 91785955
GI number: 91785955
Start: 44836
End: 45432
Strand: Direct
Name: 91785955
Synonym: Bpro_0042
Alternate gene names: NA
Gene position: 44836-45432 (Clockwise)
Preceding gene: 91785954
Following gene: 91785960
Centisome position: 0.86
GC content: 61.64
Gene sequence:
>597_bases ATGGCCTACGCAACCCTGCGCATCATTCGCGACGAGCACGCTGCCTTGTCCGCTGTACTTAAATCCCTGCTGATGATGCT GGATCGCGGGCCCGGCGATGCGCCGGAAACGTTTTTCGACGTGCTGCGCGCTATGCTGTTTTACATTGATGAGTTCCCGG AGCGGCAGCACCATCCCAAGGAATCGGATTTGTTGTTTCCCAAGGTCGTGCGGGGCGCACCGGAGACGATGGAGGCAGTG GCGCGCCTGGAGCACGACCACCTGAACGGTGAGATGGCGGTGCGTGCGCTTCAGCACCAGTTGATCGCGTGGGAACTGCT GGGCGAGGCGCGCAGGCCGGCATTCGAGACAGCTGCGCGCGCGTATGTGGCGTTTTACCTGGAGCATATGAAGCTTGAAG AAACCGTGATCCTGCCTGCGGCCGAGAAAGCCCTGAACGCCGCCGACTGGCACGAACTGGATGCCGTTTTTGGCACCAAC CGGGATCCGCTGACCGGGTCCTACCCGCATGACCCGGCCTATGACCGTTTGTTTACCCGCATCGTCATGAAAACCCCCGC GCCCATCGGGCTGGGGCCTTCTTCCGTCAACGCCTGA
Upstream 100 bases:
>100_bases CTCGCCCTCTTTGACGCGCCCGCTTGATGTGAATCAAGGTGCGCCCGCCTGAGTGGTGGGATGCTGGGTGCCACTGAGTT TGTTCTGGGGAAAGACGATC
Downstream 100 bases:
>100_bases CAGCGCCTGAGGGCGCATATCCGGCGAGACGCTTCGGCAGCGGGGCCTTATTTGGCCGGCGCCGACGGTGCGGCCGGCAT CTGGTCGATCATCATTTTCA
Product: hemerythrin HHE cation-binding region
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MAYATLRIIRDEHAALSAVLKSLLMMLDRGPGDAPETFFDVLRAMLFYIDEFPERQHHPKESDLLFPKVVRGAPETMEAV ARLEHDHLNGEMAVRALQHQLIAWELLGEARRPAFETAARAYVAFYLEHMKLEETVILPAAEKALNAADWHELDAVFGTN RDPLTGSYPHDPAYDRLFTRIVMKTPAPIGLGPSSVNA
Sequences:
>Translated_198_residues MAYATLRIIRDEHAALSAVLKSLLMMLDRGPGDAPETFFDVLRAMLFYIDEFPERQHHPKESDLLFPKVVRGAPETMEAV ARLEHDHLNGEMAVRALQHQLIAWELLGEARRPAFETAARAYVAFYLEHMKLEETVILPAAEKALNAADWHELDAVFGTN RDPLTGSYPHDPAYDRLFTRIVMKTPAPIGLGPSSVNA >Mature_197_residues AYATLRIIRDEHAALSAVLKSLLMMLDRGPGDAPETFFDVLRAMLFYIDEFPERQHHPKESDLLFPKVVRGAPETMEAVA RLEHDHLNGEMAVRALQHQLIAWELLGEARRPAFETAARAYVAFYLEHMKLEETVILPAAEKALNAADWHELDAVFGTNR DPLTGSYPHDPAYDRLFTRIVMKTPAPIGLGPSSVNA
Specific function: Unknown
COG id: COG3945
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22245; Mature: 22114
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYATLRIIRDEHAALSAVLKSLLMMLDRGPGDAPETFFDVLRAMLFYIDEFPERQHHPK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCC ESDLLFPKVVRGAPETMEAVARLEHDHLNGEMAVRALQHQLIAWELLGEARRPAFETAAR CCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AYVAFYLEHMKLEETVILPAAEKALNAADWHELDAVFGTNRDPLTGSYPHDPAYDRLFTR HHHHHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH IVMKTPAPIGLGPSSVNA HHHHCCCCCCCCCCCCCC >Mature Secondary Structure AYATLRIIRDEHAALSAVLKSLLMMLDRGPGDAPETFFDVLRAMLFYIDEFPERQHHPK CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCC ESDLLFPKVVRGAPETMEAVARLEHDHLNGEMAVRALQHQLIAWELLGEARRPAFETAAR CCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AYVAFYLEHMKLEETVILPAAEKALNAADWHELDAVFGTNRDPLTGSYPHDPAYDRLFTR HHHHHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH IVMKTPAPIGLGPSSVNA HHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA