| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is thiE [H]
Identifier: 91785954
GI number: 91785954
Start: 44115
End: 44762
Strand: Direct
Name: thiE [H]
Synonym: Bpro_0041
Alternate gene names: 91785954
Gene position: 44115-44762 (Clockwise)
Preceding gene: 91785953
Following gene: 91785955
Centisome position: 0.85
GC content: 69.91
Gene sequence:
>648_bases ATGAATACAGACGCTTTTGCTCCATTGACCGGCCCCATCGGCTTTTACCCCGTGGTGCCCGATGCCGCCTGGGTGCAGCG TCTGCTGGGCTGGGGTGTGCGTACCATCCAGCTGCGCATCAAGGCGGCGGACCACACGCCGGCCGAGATCGAGCGCGAAG TGCGCGCGGCGGTCGAGGCCGGGCGCGCCGTGCCGGGCGCGCAGGTCTTCATCAACGACCACTGGCAGCTGGCGCTGGCC GCCGGCGCCTATGGCGTGCACCTGGGCCAGGAAGACCTGAGCATGGCGGAGGCGGACCTCAATGCCCTGCGCAAGGCGGG TGTGCGGCTGGGCCTGAGCACGCACACGCCGGCCGAGCTGGCGCGTGCCCATGCGGTGCAGCCCTCCTACCTGGCGATCG GTCCGGTCTACCCGACCCTGCTCAAGGTCATGCCCTACGAGCCGGTGGGCCTGGAGCGCCTCAAGGAATGGGCGCTGCGG GCCGTACCGTATTCCGTGGTGGCGATAGGCGGCATTTCGCTGGCACGCTTGCCTGGCGTGATAGCCTGCGGCGTGGATGG CGTGGCGGTGGTCAGCGCGGTGACGCAGGCGGCTGACCCCGAGCAGGCCACCAGGCAGGCACTCGCCCTCTTTGACGCGC CCGCTTGA
Upstream 100 bases:
>100_bases CGGAATCCTCATGCACGCAAGTGCATTCCGGTGTCCTGCGCTCCGTGCGCCTTGCACTGCACTCCGATAATCGAATTTCT GACCGCCCCTTGAGACCACC
Downstream 100 bases:
>100_bases TGTGAATCAAGGTGCGCCCGCCTGAGTGGTGGGATGCTGGGTGCCACTGAGTTTGTTCTGGGGAAAGACGATCATGGCCT ACGCAACCCTGCGCATCATT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNTDAFAPLTGPIGFYPVVPDAAWVQRLLGWGVRTIQLRIKAADHTPAEIEREVRAAVEAGRAVPGAQVFINDHWQLALA AGAYGVHLGQEDLSMAEADLNALRKAGVRLGLSTHTPAELARAHAVQPSYLAIGPVYPTLLKVMPYEPVGLERLKEWALR AVPYSVVAIGGISLARLPGVIACGVDGVAVVSAVTQAADPEQATRQALALFDAPA
Sequences:
>Translated_215_residues MNTDAFAPLTGPIGFYPVVPDAAWVQRLLGWGVRTIQLRIKAADHTPAEIEREVRAAVEAGRAVPGAQVFINDHWQLALA AGAYGVHLGQEDLSMAEADLNALRKAGVRLGLSTHTPAELARAHAVQPSYLAIGPVYPTLLKVMPYEPVGLERLKEWALR AVPYSVVAIGGISLARLPGVIACGVDGVAVVSAVTQAADPEQATRQALALFDAPA >Mature_215_residues MNTDAFAPLTGPIGFYPVVPDAAWVQRLLGWGVRTIQLRIKAADHTPAEIEREVRAAVEAGRAVPGAQVFINDHWQLALA AGAYGVHLGQEDLSMAEADLNALRKAGVRLGLSTHTPAELARAHAVQPSYLAIGPVYPTLLKVMPYEPVGLERLKEWALR AVPYSVVAIGGISLARLPGVIACGVDGVAVVSAVTQAADPEQATRQALALFDAPA
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=205, Percent_Identity=54.1463414634146, Blast_Score=192, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 22694; Mature: 22694
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTDAFAPLTGPIGFYPVVPDAAWVQRLLGWGVRTIQLRIKAADHTPAEIEREVRAAVEA CCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHH GRAVPGAQVFINDHWQLALAAGAYGVHLGQEDLSMAEADLNALRKAGVRLGLSTHTPAEL CCCCCCCEEEECCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHCCEECCCCCCHHHH ARAHAVQPSYLAIGPVYPTLLKVMPYEPVGLERLKEWALRAVPYSVVAIGGISLARLPGV HHHHCCCCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHEEEECCCHHHHCCCE IACGVDGVAVVSAVTQAADPEQATRQALALFDAPA EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTDAFAPLTGPIGFYPVVPDAAWVQRLLGWGVRTIQLRIKAADHTPAEIEREVRAAVEA CCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHHH GRAVPGAQVFINDHWQLALAAGAYGVHLGQEDLSMAEADLNALRKAGVRLGLSTHTPAEL CCCCCCCEEEECCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHCCEECCCCCCHHHH ARAHAVQPSYLAIGPVYPTLLKVMPYEPVGLERLKEWALRAVPYSVVAIGGISLARLPGV HHHHCCCCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHEEEECCCHHHHCCCE IACGVDGVAVVSAVTQAADPEQATRQALALFDAPA EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]