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The map label for this gene is ygbK [C]

Identifier: 91785944

GI number: 91785944

Start: 31696

End: 33045

Strand: Reverse

Name: ygbK [C]

Synonym: Bpro_0031

Alternate gene names: 91785944

Gene position: 33045-31696 (Counterclockwise)

Preceding gene: 91785945

Following gene: 91785942

Centisome position: 0.64

GC content: 70.96

Gene sequence:

>1350_bases
ATGCAGGCGAGCCATAAAGACAGCACGCTGAAGATCGCCTACTACGGCGATGACTTCACGGGCGCCACCGACACGCTCGC
CACCGCCGCGCGCGCCGGCCTGCGCACGCTGCTGTTCCTGGGCCTGCCCACCGCCACGCAACTCGAACGCGCCGGCCCGC
TCGACTGCCTGGGCATTGCCGGCGCCGCACGCGCCATGACCCCGGCCGAAATGCAGCTGGAGCTCGAGCCGGTGGGCCGC
TTGTTCGCGGCGCTCGGGGCGCCCGTCATGCATTACAAAACCTGCTCCACCTTTGACAGCGCACCGCACATCGGCAGCAT
AGGCGCGGCCCTTCGCATCCTGCGGCCGCATGCCGGCAACGCGCTGGTGCCCATCGTCGGTGGCCAGCCCAACCTGCACC
GCTACTGCGTGTTCGGCAACCTGTTTGCCGGCACGGGCAACGGCGGCGCGATCCACCGGCTGGACCGTCACCCGACGATG
CGCCAGCACCCGGTGACGCCCATGCACGAGGCCGACCTGCGCCTGCACCTGGCGCAGCAGGGGCTTGAGAACTTGAGTGC
CATCGCCTACCCCGACTATGCGCAGCTCGATGAAGCGCTGGATCGGCAGCTTGACGCCCTCCTCGCACAGGGACCGGATG
CCGTGCTGTTTGACATCGCCCATCCGGACAACCTCGCCGCCGTGGGCCGCCTGATCTGGCAGCACGCCCGGCGCCAGCGC
CTGCTCGCCGCCGGGCCCAGCAGCGTGGTGCAGGCCCTGGCCGCGCACTGGCAGAGCGGAGCCGGCCCCGCCCGGACGGC
CATTGCGCCGGCGCAGGGCCCGGTGCTGGTGCTCGCCGGCAGCCTGTCGCCGCTGACGGCGCGCCAGGTCAAGGCCGCCA
CGTCTTACGAACACATTGCGCTCGATGCGCCCCGGCTGGCCGGCGACGAAAACTACCGGATGCAGATGGCCCGCCAGATC
GCCACGCGGCTGGACCAGGGCGCCCACGTGCTGGCCTGCACCTCGGGCGCAGACGGTGCTACCGTGAGCACAAGCTCCAG
TACCAGTAGCAGCCCCACCGACGGGCGCGCGCTGGCACAGGCCTGCGGCGACTTGCTGGCGCACGTGCTGGCCACCCGGC
CGATCAGGCGCCTGGGCATTGCCGGGGGCGACACCTCCAGCCATGCCGTGCAGGCCCTCCAGGCCTGGGGGCTGTCTTAC
CGCGCCCCCCTGGCGCCCGGCGTGGCGCTGTGCCGGCTGCACAGCGAGCAAGCGTCCCTCGACGGGCTGGAGATCATGCT
CAAGGGCGGGCAGATGGGTGGCGAGACACTGTTTGAAGAACTGCTGGCCGGCACGCCCTTGCCGGTTTAA

Upstream 100 bases:

>100_bases
GTCAGGCCTGGGCGGCCGCACGCCAGGGTGTTGCGCTGGCCGAGTTTGCGCGCGAGGCGCCCGAGCTGGCTGCCGCGCTC
GCCTTCTTCGGCAAATAAGC

Downstream 100 bases:

>100_bases
GAGAGCTTATGAAGAGCGCTTAAAAGGGCGGCGACTCTGCCTCGGCCGCAGCCAGCGCTGGGGCCAATGCTGGGGCCAAT
GCCGCAGGCGCGTCAGCCCC

Product: Hrp-dependent type III effector protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MQASHKDSTLKIAYYGDDFTGATDTLATAARAGLRTLLFLGLPTATQLERAGPLDCLGIAGAARAMTPAEMQLELEPVGR
LFAALGAPVMHYKTCSTFDSAPHIGSIGAALRILRPHAGNALVPIVGGQPNLHRYCVFGNLFAGTGNGGAIHRLDRHPTM
RQHPVTPMHEADLRLHLAQQGLENLSAIAYPDYAQLDEALDRQLDALLAQGPDAVLFDIAHPDNLAAVGRLIWQHARRQR
LLAAGPSSVVQALAAHWQSGAGPARTAIAPAQGPVLVLAGSLSPLTARQVKAATSYEHIALDAPRLAGDENYRMQMARQI
ATRLDQGAHVLACTSGADGATVSTSSSTSSSPTDGRALAQACGDLLAHVLATRPIRRLGIAGGDTSSHAVQALQAWGLSY
RAPLAPGVALCRLHSEQASLDGLEIMLKGGQMGGETLFEELLAGTPLPV

Sequences:

>Translated_449_residues
MQASHKDSTLKIAYYGDDFTGATDTLATAARAGLRTLLFLGLPTATQLERAGPLDCLGIAGAARAMTPAEMQLELEPVGR
LFAALGAPVMHYKTCSTFDSAPHIGSIGAALRILRPHAGNALVPIVGGQPNLHRYCVFGNLFAGTGNGGAIHRLDRHPTM
RQHPVTPMHEADLRLHLAQQGLENLSAIAYPDYAQLDEALDRQLDALLAQGPDAVLFDIAHPDNLAAVGRLIWQHARRQR
LLAAGPSSVVQALAAHWQSGAGPARTAIAPAQGPVLVLAGSLSPLTARQVKAATSYEHIALDAPRLAGDENYRMQMARQI
ATRLDQGAHVLACTSGADGATVSTSSSTSSSPTDGRALAQACGDLLAHVLATRPIRRLGIAGGDTSSHAVQALQAWGLSY
RAPLAPGVALCRLHSEQASLDGLEIMLKGGQMGGETLFEELLAGTPLPV
>Mature_449_residues
MQASHKDSTLKIAYYGDDFTGATDTLATAARAGLRTLLFLGLPTATQLERAGPLDCLGIAGAARAMTPAEMQLELEPVGR
LFAALGAPVMHYKTCSTFDSAPHIGSIGAALRILRPHAGNALVPIVGGQPNLHRYCVFGNLFAGTGNGGAIHRLDRHPTM
RQHPVTPMHEADLRLHLAQQGLENLSAIAYPDYAQLDEALDRQLDALLAQGPDAVLFDIAHPDNLAAVGRLIWQHARRQR
LLAAGPSSVVQALAAHWQSGAGPARTAIAPAQGPVLVLAGSLSPLTARQVKAATSYEHIALDAPRLAGDENYRMQMARQI
ATRLDQGAHVLACTSGADGATVSTSSSTSSSPTDGRALAQACGDLLAHVLATRPIRRLGIAGGDTSSHAVQALQAWGLSY
RAPLAPGVALCRLHSEQASLDGLEIMLKGGQMGGETLFEELLAGTPLPV

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=411, Percent_Identity=26.0340632603406, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 47017; Mature: 47017

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASHKDSTLKIAYYGDDFTGATDTLATAARAGLRTLLFLGLPTATQLERAGPLDCLGIA
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHC
GAARAMTPAEMQLELEPVGRLFAALGAPVMHYKTCSTFDSAPHIGSIGAALRILRPHAGN
CHHHCCCCHHEEEEHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC
ALVPIVGGQPNLHRYCVFGNLFAGTGNGGAIHRLDRHPTMRQHPVTPMHEADLRLHLAQQ
EEEEEECCCCCCEEEEEEECEEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
GLENLSAIAYPDYAQLDEALDRQLDALLAQGPDAVLFDIAHPDNLAAVGRLIWQHARRQR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
LLAAGPSSVVQALAAHWQSGAGPARTAIAPAQGPVLVLAGSLSPLTARQVKAATSYEHIA
HHHCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEE
LDAPRLAGDENYRMQMARQIATRLDQGAHVLACTSGADGATVSTSSSTSSSPTDGRALAQ
ECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCHHHHHH
ACGDLLAHVLATRPIRRLGIAGGDTSSHAVQALQAWGLSYRAPLAPGVALCRLHSEQASL
HHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHCCC
DGLEIMLKGGQMGGETLFEELLAGTPLPV
CCEEEEEECCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQASHKDSTLKIAYYGDDFTGATDTLATAARAGLRTLLFLGLPTATQLERAGPLDCLGIA
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHC
GAARAMTPAEMQLELEPVGRLFAALGAPVMHYKTCSTFDSAPHIGSIGAALRILRPHAGN
CHHHCCCCHHEEEEHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC
ALVPIVGGQPNLHRYCVFGNLFAGTGNGGAIHRLDRHPTMRQHPVTPMHEADLRLHLAQQ
EEEEEECCCCCCEEEEEEECEEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
GLENLSAIAYPDYAQLDEALDRQLDALLAQGPDAVLFDIAHPDNLAAVGRLIWQHARRQR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
LLAAGPSSVVQALAAHWQSGAGPARTAIAPAQGPVLVLAGSLSPLTARQVKAATSYEHIA
HHHCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEE
LDAPRLAGDENYRMQMARQIATRLDQGAHVLACTSGADGATVSTSSSTSSSPTDGRALAQ
ECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCHHHHHH
ACGDLLAHVLATRPIRRLGIAGGDTSSHAVQALQAWGLSYRAPLAPGVALCRLHSEQASL
HHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHCCC
DGLEIMLKGGQMGGETLFEELLAGTPLPV
CCEEEEEECCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]