| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785928
Identifier: 91785928
GI number: 91785928
Start: 14503
End: 15492
Strand: Reverse
Name: 91785928
Synonym: Bpro_0015
Alternate gene names: NA
Gene position: 15492-14503 (Counterclockwise)
Preceding gene: 91785930
Following gene: 91785924
Centisome position: 0.3
GC content: 64.65
Gene sequence:
>990_bases ATGTATCGCATGTCAGCAAGCGAAACACCCGCAAGCCTGCTTTTGCCGCCGCAACGCTCCATGGCCAGCCAGCTATGGGT TCAGCGCCGCCCCTCGCGTGCAAACCCGGCTGGCAGCCCGGGTGCCGGCAGGTATATTGGGCGCCAGTTTCAACGAAAGG CCGCCGTGCGTAGCAAGCTCTTCTCCCTCTTCTCCCGTTTCATTGCCATTGGCGTACTGCTGATGGCAGCCCTGTTGAGC AACATGACCCATGCCCAGGAAAAAGTCGGCGTGCTGATGCTGCACGGCAAAAACCCCGGCAGCAACAGCGATCCGAGCAT GGCCCGCATCAAAACCACGCTGGAGCAGGCTGGCTTGCTAGTGCAGTTTCCCGACATGCCCTGGTCACGCGGCCGCTACC TGGACGGCCATTGGGACAAAGCCATGGCCGAGATGGCCGGCCACGTCAAAGCCCTGCGCAGCCAGGGCGCCGGCAAGATC GTGGTCATGGGCCACAGCATGGGCGTGCCCGCCGCCATGGGTTTTGCCGCACGCGGCGGTGACGTGCAGGCGCTGGTGCT GCTGGCGCCCGGCCATGTGCCGGCGCGCTACTACGTCGCACAGCAAAACAAGGTCGTGCGCGAGAGCGTCGACGAAGCGC GCCAGCTGGTGGCCGCCGGCAAAGGCGATTCGCGAGAACGCTTCAGCGACATCAACCAGGGCAGGCAGATCAACGTGGTG GCCACCGCGCGCGACTACCTGTCGTACTTCGACCCAGAGTCCGATGCCGACATGGGCGTGACCGCACCGCGCGTGCCTGC CACCACGCCCGTGCTGACCGTGATCGGCGACGCAGACGGCATCATTGCCTATGCCCGCGGCTACTTCGTCGACAAGCTGC CAGCCCATCCCAAAAGCCAGTACCTGGAAGTCAAGGCGAATCACCTGACGACACCGGCGGTCGCCAGCGATGCCGTCGTC CAGTGGATCAAGGCGGCTACCGCTCCCTGA
Upstream 100 bases:
>100_bases TGTAAGTCGATGCGCAATCACCATTTCATGGCTGATGCGTGGTCAGTGAGCACTCACTAATCAGACAATCTTCATCATGT GAAACAGCGCTGCCGCCCGG
Downstream 100 bases:
>100_bases GCGGTCACGGGTCTGCGCAAACCGGATTTGCTAATCATTCAGTAGCCGATTGCGCACGCAGTACAACGGCAGCAGGCTCT TATTCCATTTCTAATTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MYRMSASETPASLLLPPQRSMASQLWVQRRPSRANPAGSPGAGRYIGRQFQRKAAVRSKLFSLFSRFIAIGVLLMAALLS NMTHAQEKVGVLMLHGKNPGSNSDPSMARIKTTLEQAGLLVQFPDMPWSRGRYLDGHWDKAMAEMAGHVKALRSQGAGKI VVMGHSMGVPAAMGFAARGGDVQALVLLAPGHVPARYYVAQQNKVVRESVDEARQLVAAGKGDSRERFSDINQGRQINVV ATARDYLSYFDPESDADMGVTAPRVPATTPVLTVIGDADGIIAYARGYFVDKLPAHPKSQYLEVKANHLTTPAVASDAVV QWIKAATAP
Sequences:
>Translated_329_residues MYRMSASETPASLLLPPQRSMASQLWVQRRPSRANPAGSPGAGRYIGRQFQRKAAVRSKLFSLFSRFIAIGVLLMAALLS NMTHAQEKVGVLMLHGKNPGSNSDPSMARIKTTLEQAGLLVQFPDMPWSRGRYLDGHWDKAMAEMAGHVKALRSQGAGKI VVMGHSMGVPAAMGFAARGGDVQALVLLAPGHVPARYYVAQQNKVVRESVDEARQLVAAGKGDSRERFSDINQGRQINVV ATARDYLSYFDPESDADMGVTAPRVPATTPVLTVIGDADGIIAYARGYFVDKLPAHPKSQYLEVKANHLTTPAVASDAVV QWIKAATAP >Mature_329_residues MYRMSASETPASLLLPPQRSMASQLWVQRRPSRANPAGSPGAGRYIGRQFQRKAAVRSKLFSLFSRFIAIGVLLMAALLS NMTHAQEKVGVLMLHGKNPGSNSDPSMARIKTTLEQAGLLVQFPDMPWSRGRYLDGHWDKAMAEMAGHVKALRSQGAGKI VVMGHSMGVPAAMGFAARGGDVQALVLLAPGHVPARYYVAQQNKVVRESVDEARQLVAAGKGDSRERFSDINQGRQINVV ATARDYLSYFDPESDADMGVTAPRVPATTPVLTVIGDADGIIAYARGYFVDKLPAHPKSQYLEVKANHLTTPAVASDAVV QWIKAATAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35505; Mature: 35505
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRMSASETPASLLLPPQRSMASQLWVQRRPSRANPAGSPGAGRYIGRQFQRKAAVRSKL CCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FSLFSRFIAIGVLLMAALLSNMTHAQEKVGVLMLHGKNPGSNSDPSMARIKTTLEQAGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCE VQFPDMPWSRGRYLDGHWDKAMAEMAGHVKALRSQGAGKIVVMGHSMGVPAAMGFAARGG EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCC DVQALVLLAPGHVPARYYVAQQNKVVRESVDEARQLVAAGKGDSRERFSDINQGRQINVV CEEEEEEECCCCCCCEEEEHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEE ATARDYLSYFDPESDADMGVTAPRVPATTPVLTVIGDADGIIAYARGYFVDKLPAHPKSQ EEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHCCHHHCCCCCCCCCC YLEVKANHLTTPAVASDAVVQWIKAATAP EEEEECCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYRMSASETPASLLLPPQRSMASQLWVQRRPSRANPAGSPGAGRYIGRQFQRKAAVRSKL CCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH FSLFSRFIAIGVLLMAALLSNMTHAQEKVGVLMLHGKNPGSNSDPSMARIKTTLEQAGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCE VQFPDMPWSRGRYLDGHWDKAMAEMAGHVKALRSQGAGKIVVMGHSMGVPAAMGFAARGG EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCC DVQALVLLAPGHVPARYYVAQQNKVVRESVDEARQLVAAGKGDSRERFSDINQGRQINVV CEEEEEEECCCCCCCEEEEHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEE ATARDYLSYFDPESDADMGVTAPRVPATTPVLTVIGDADGIIAYARGYFVDKLPAHPKSQ EEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHCCHHHCCCCCCCCCC YLEVKANHLTTPAVASDAVVQWIKAATAP EEEEECCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA