| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91785924
Identifier: 91785924
GI number: 91785924
Start: 10874
End: 12052
Strand: Reverse
Name: 91785924
Synonym: Bpro_0011
Alternate gene names: NA
Gene position: 12052-10874 (Counterclockwise)
Preceding gene: 91785928
Following gene: 91785918
Centisome position: 0.23
GC content: 61.49
Gene sequence:
>1179_bases ATGATTTTGAGAAATATTGAACCCATCTTGTGCACCCGCCTGGCCACCGTTGTGCCGGCAGTGGTGTTGCTCGGACCTCG TCAAGTGGGCAAAACCACGTTGGCGCGCAAGATAGCAGCCGACTGGCCGGGTGGCGCGGTGTATCTGGACATGGAACGTC CGGCAGACCGGCGGCGGCTGGATGACGCAGATGCCTACTTGAGGGCACAAAACGGCAAGCTGGTCGTGATTGACGAAATT CAGCGCGCACCGGGCTTGTTTGAGGTGCTGCGCGGCATTATTGATGACCGGCGTGCCGCAGGGGAGCGGTTTGGCCACTT TCTGCTGCTGGGCTCGGCAGCACTTGAACTGATGCGCCAGTCGTCTGAAACGCTGGCGGGGCGGGTGGCATATCTTGAAA TTGGTCCCATCGACATTCTTGAGGCCGGCACTGCCAGTCTGGATGCCCAAACGCTCTGGTTGCGTGGTGGCTTTCCCGAG AGCCTGCTCGCACAGGGCGACGGCCCCAGTCTGGACTGGCGGCGGGACTTCATCCGCTCTTACCTTGAGCGGGACGTGCC CATGTTTGCACCACGCATGCCCGTACAGGCGCTGGGGCGCCTGTGGACCATGTTGGCCCACCAGCAAGGCGGCTTGCTGA ATCAGGCGCGGCTGGCGGCTGGCCTGGGCGTATCAGCACCCACCGTAACGCGTTACACCGACCTGATGGTTGATCTGCAA CTGGTGCGCCGCCTGGCGCCGTGGAGCGGCAATGTTGGCAAACGCCTTGTGAAGGCACCTAAAGTTTATGTGCGCGACAG CGGCATTGTTCATGCGTTGCTGGATCTGGAAACCTGGAACGATGTGCTGGGTCATCCGGTGGCGGGCCCGAGCTACGAGG GCTTCGTGATCGAAAACCTGATTCAGTGCGCCGGGCCGCGTTGGCGACCCTACTTCTATCGCACCCATGATGGCGCCGAG ATCGACCTGCTGCTGGAGCGCGGTGGCCAGCCCGAAATAGCGATCGAGGTCAAAAAATCGTCCGCACCCACATTGGACAA GGGCTTTGGCATGGCCTGTGACGACCTGAAGGTGCTCCAGCGTTATGTGGTGTACCCGGGCGAAGAAACCTATCCAGTCC GGCACGGTACGCAGGCCATTGGCTTGGCGGCGTTGGCCCGGCAGATGCAGGATGCCTGA
Upstream 100 bases:
>100_bases CGCCACAATTTCCGCATCGACCAGCGTTTTCATAACGCTCGGAGCCAAACCCGAGATTTTTTAAACCGTAAATCGAATAC ATGACGTATGATTTACGGCA
Downstream 100 bases:
>100_bases AGCTGCGTCGATCCGCGGCCAGGCAACGCACCCCTTCATGCGCCTCCACAAGGCAGCTCAGCGCCCGGTATTGCCCCGGC GCGACTGCGTCTGATTCGCG
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MILRNIEPILCTRLATVVPAVVLLGPRQVGKTTLARKIAADWPGGAVYLDMERPADRRRLDDADAYLRAQNGKLVVIDEI QRAPGLFEVLRGIIDDRRAAGERFGHFLLLGSAALELMRQSSETLAGRVAYLEIGPIDILEAGTASLDAQTLWLRGGFPE SLLAQGDGPSLDWRRDFIRSYLERDVPMFAPRMPVQALGRLWTMLAHQQGGLLNQARLAAGLGVSAPTVTRYTDLMVDLQ LVRRLAPWSGNVGKRLVKAPKVYVRDSGIVHALLDLETWNDVLGHPVAGPSYEGFVIENLIQCAGPRWRPYFYRTHDGAE IDLLLERGGQPEIAIEVKKSSAPTLDKGFGMACDDLKVLQRYVVYPGEETYPVRHGTQAIGLAALARQMQDA
Sequences:
>Translated_392_residues MILRNIEPILCTRLATVVPAVVLLGPRQVGKTTLARKIAADWPGGAVYLDMERPADRRRLDDADAYLRAQNGKLVVIDEI QRAPGLFEVLRGIIDDRRAAGERFGHFLLLGSAALELMRQSSETLAGRVAYLEIGPIDILEAGTASLDAQTLWLRGGFPE SLLAQGDGPSLDWRRDFIRSYLERDVPMFAPRMPVQALGRLWTMLAHQQGGLLNQARLAAGLGVSAPTVTRYTDLMVDLQ LVRRLAPWSGNVGKRLVKAPKVYVRDSGIVHALLDLETWNDVLGHPVAGPSYEGFVIENLIQCAGPRWRPYFYRTHDGAE IDLLLERGGQPEIAIEVKKSSAPTLDKGFGMACDDLKVLQRYVVYPGEETYPVRHGTQAIGLAALARQMQDA >Mature_392_residues MILRNIEPILCTRLATVVPAVVLLGPRQVGKTTLARKIAADWPGGAVYLDMERPADRRRLDDADAYLRAQNGKLVVIDEI QRAPGLFEVLRGIIDDRRAAGERFGHFLLLGSAALELMRQSSETLAGRVAYLEIGPIDILEAGTASLDAQTLWLRGGFPE SLLAQGDGPSLDWRRDFIRSYLERDVPMFAPRMPVQALGRLWTMLAHQQGGLLNQARLAAGLGVSAPTVTRYTDLMVDLQ LVRRLAPWSGNVGKRLVKAPKVYVRDSGIVHALLDLETWNDVLGHPVAGPSYEGFVIENLIQCAGPRWRPYFYRTHDGAE IDLLLERGGQPEIAIEVKKSSAPTLDKGFGMACDDLKVLQRYVVYPGEETYPVRHGTQAIGLAALARQMQDA
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 [H]
Pfam domain/function: PF08279 HTH_11 [H]
EC number: NA
Molecular weight: Translated: 43249; Mature: 43249
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRNIEPILCTRLATVVPAVVLLGPRQVGKTTLARKIAADWPGGAVYLDMERPADRRRL CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCC DDADAYLRAQNGKLVVIDEIQRAPGLFEVLRGIIDDRRAAGERFGHFLLLGSAALELMRQ CCCHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSETLAGRVAYLEIGPIDILEAGTASLDAQTLWLRGGFPESLLAQGDGPSLDWRRDFIRS HHHHHHCEEEEEEECCCHHCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHHH YLERDVPMFAPRMPVQALGRLWTMLAHQQGGLLNQARLAAGLGVSAPTVTRYTDLMVDLQ HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH LVRRLAPWSGNVGKRLVKAPKVYVRDSGIVHALLDLETWNDVLGHPVAGPSYEGFVIENL HHHHHCCCCCCHHHHHHHCCEEEEECCCEEEEEEEHHHHHHHHCCCCCCCCCCCHHHHHH IQCAGPRWRPYFYRTHDGAEIDLLLERGGQPEIAIEVKKSSAPTLDKGFGMACDDLKVLQ HHHCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH RYVVYPGEETYPVRHGTQAIGLAALARQMQDA HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MILRNIEPILCTRLATVVPAVVLLGPRQVGKTTLARKIAADWPGGAVYLDMERPADRRRL CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCC DDADAYLRAQNGKLVVIDEIQRAPGLFEVLRGIIDDRRAAGERFGHFLLLGSAALELMRQ CCCHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSETLAGRVAYLEIGPIDILEAGTASLDAQTLWLRGGFPESLLAQGDGPSLDWRRDFIRS HHHHHHCEEEEEEECCCHHCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHHH YLERDVPMFAPRMPVQALGRLWTMLAHQQGGLLNQARLAAGLGVSAPTVTRYTDLMVDLQ HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH LVRRLAPWSGNVGKRLVKAPKVYVRDSGIVHALLDLETWNDVLGHPVAGPSYEGFVIENL HHHHHCCCCCCHHHHHHHCCEEEEECCCEEEEEEEHHHHHHHHCCCCCCCCCCCHHHHHH IQCAGPRWRPYFYRTHDGAEIDLLLERGGQPEIAIEVKKSSAPTLDKGFGMACDDLKVLQ HHHCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH RYVVYPGEETYPVRHGTQAIGLAALARQMQDA HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]