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The map label for this gene is 89885977

Identifier: 89885977

GI number: 89885977

Start: 252892

End: 254463

Strand: Reverse

Name: 89885977

Synonym: Rfer_4492

Alternate gene names: NA

Gene position: 254463-252892 (Counterclockwise)

Preceding gene: 89885978

Following gene: 89885976

Centisome position: 98.84

GC content: 56.36

Gene sequence:

>1572_bases
ATGATTTTTGTACGTCGCCGCATGCAGGGTTTTACGCTGCCAGAACTTATGATCGGGTTGGCCGTGTTTTCAATGCTGGC
CATTAGCACTGCCATGTCGCGGCGAAACGATGGAATCGTTGCTCGCGGTGAGTCGTTCGCCACTGGTTTCATACCGTACG
ACGCCGCCTTGGAAAGCTACGTCCGCAAGAACCGGATCGCTCTGCAGGCGGGAACGCCGATTGTCGGTGTGGCGAACCCA
TTGCGTCCGACTGCCGCTGAGTTGCGTGCCATCACGGACCTTCCCGCGACTTACCCGCTAACGCTGCCGGATTCAGGCGG
GGCGCCTATTTTCCGGGTGGATCGGTTGCCTGGTGGGTGTGTGGGGTCGACGTGTGATATTGAATACTACGTTGGGACTA
CAACGCCGTTACTCAATGCCGACGGCAATGCCGCAGAAGGCGTACTTTCCTACGCGACAAGAAAATTGGGGGGGACGGCC
GGGTTTTCTGATTCAGTGAGCCCCACTGTCATTGCGGGGCGTGGGGGTTGGACATACACCAATCCACAAGGCGGTGCATC
TGGGATCGCAGGCATCTTCGGAACCTACAGGACATACTCGTCAAGTAGTGTTGCCAATTACGTTCTGCGCGGAGATACGA
TCGATCCAGCCTTGGCGGGACCATTGACAGTAGGCGGGCAGACAACCTTCAATGGCGGGACGCAAGTGAACAACACACTT
GGTGTGACAGGCGCGGCTAGCGTCGGAACAACCTTGAATGTTGGAGGTGCGACCACGCTCAACGGTGCTACCCAAGTCAA
TGGCGCGCTCGGTGTGTCTGGTGCGACAACTATGAACGCAGGAGCCAGCATTGGAACCACCTTGAATGTTGGTGGGGCCA
CCACACTCGCTGGTGCAACCCAAATCAACAACACACTTGGAGTGACGGGTGCTGCCAGCGTCAACCGTTTGGTGCCAACA
GGACTCTATGCCCTTGGCGCGGCGTGCGCAGAAGAAAGTGCCATCGCGCGAGCCACCGGTGGCGGCGCTGCGATTTGTAG
CGGAGGGACTTGGCGACAATTGTTTCTCGGAGCAGCTGTCGGAGTGGCATGCGCTCCAAACGGATCGGATGCGACCGATG
CCGCCAGCGCCAAACTCACCTGCATCAATGGCACGTTTCGAGCGATCAGTTCTCTACAAGCCGAAGGCACGGTAGGTATG
CCTTGTCCGGCACCCGGACAGACATCATGGGATTTTTCTGTTGCGACACCAGCTCAACTGTTATGTCGAGATAATCCATC
TGGGGGTGGTCCGAAGTGGTATCGACTGCAAGATGTGACGACCAATTTGATCTTTGTGACGGCCATAGAGGTTGGCAATG
GAAGCTTTGTGCCAAAACCGCTGTGTAGTGTTGCCGGAGGGCAGACCGCAACGCCCATACTACAGCTCATTCCTAAGACT
GAATCGTCCAATGACGCTGGCTTCAACCGGTATGGCAACGACGTAGGAGCAGGTTGGACAGTCGTTCTCACCAGTTCATC
AGGATTGCCATTGGGAGTTGCTATTGCGCAGACGTTTTGCTACTACAATTAG

Upstream 100 bases:

>100_bases
ATCGCAGAGCTTACGACCGGCCTGGCCTGCGTCGGGCCATCGCAGCCGTGCGCACTGAACTGACGCGTGAGGCGTGATCT
AAGAGAACGAAAGCCACAAT

Downstream 100 bases:

>100_bases
TTTCAGATTTGTGTTAGTCTGATTCCTAGAATTTCTTTATCCGTTTTCCTAATGTTTGTATGGAGGTTGTGATGAGACTT
GGCATTTGTTTGCTTTCTTT

Product: methylation

Products: NA

Alternate protein names: Methylation

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MIFVRRRMQGFTLPELMIGLAVFSMLAISTAMSRRNDGIVARGESFATGFIPYDAALESYVRKNRIALQAGTPIVGVANP
LRPTAAELRAITDLPATYPLTLPDSGGAPIFRVDRLPGGCVGSTCDIEYYVGTTTPLLNADGNAAEGVLSYATRKLGGTA
GFSDSVSPTVIAGRGGWTYTNPQGGASGIAGIFGTYRTYSSSSVANYVLRGDTIDPALAGPLTVGGQTTFNGGTQVNNTL
GVTGAASVGTTLNVGGATTLNGATQVNGALGVSGATTMNAGASIGTTLNVGGATTLAGATQINNTLGVTGAASVNRLVPT
GLYALGAACAEESAIARATGGGAAICSGGTWRQLFLGAAVGVACAPNGSDATDAASAKLTCINGTFRAISSLQAEGTVGM
PCPAPGQTSWDFSVATPAQLLCRDNPSGGGPKWYRLQDVTTNLIFVTAIEVGNGSFVPKPLCSVAGGQTATPILQLIPKT
ESSNDAGFNRYGNDVGAGWTVVLTSSSGLPLGVAIAQTFCYYN

Sequences:

>Translated_523_residues
MIFVRRRMQGFTLPELMIGLAVFSMLAISTAMSRRNDGIVARGESFATGFIPYDAALESYVRKNRIALQAGTPIVGVANP
LRPTAAELRAITDLPATYPLTLPDSGGAPIFRVDRLPGGCVGSTCDIEYYVGTTTPLLNADGNAAEGVLSYATRKLGGTA
GFSDSVSPTVIAGRGGWTYTNPQGGASGIAGIFGTYRTYSSSSVANYVLRGDTIDPALAGPLTVGGQTTFNGGTQVNNTL
GVTGAASVGTTLNVGGATTLNGATQVNGALGVSGATTMNAGASIGTTLNVGGATTLAGATQINNTLGVTGAASVNRLVPT
GLYALGAACAEESAIARATGGGAAICSGGTWRQLFLGAAVGVACAPNGSDATDAASAKLTCINGTFRAISSLQAEGTVGM
PCPAPGQTSWDFSVATPAQLLCRDNPSGGGPKWYRLQDVTTNLIFVTAIEVGNGSFVPKPLCSVAGGQTATPILQLIPKT
ESSNDAGFNRYGNDVGAGWTVVLTSSSGLPLGVAIAQTFCYYN
>Mature_523_residues
MIFVRRRMQGFTLPELMIGLAVFSMLAISTAMSRRNDGIVARGESFATGFIPYDAALESYVRKNRIALQAGTPIVGVANP
LRPTAAELRAITDLPATYPLTLPDSGGAPIFRVDRLPGGCVGSTCDIEYYVGTTTPLLNADGNAAEGVLSYATRKLGGTA
GFSDSVSPTVIAGRGGWTYTNPQGGASGIAGIFGTYRTYSSSSVANYVLRGDTIDPALAGPLTVGGQTTFNGGTQVNNTL
GVTGAASVGTTLNVGGATTLNGATQVNGALGVSGATTMNAGASIGTTLNVGGATTLAGATQINNTLGVTGAASVNRLVPT
GLYALGAACAEESAIARATGGGAAICSGGTWRQLFLGAAVGVACAPNGSDATDAASAKLTCINGTFRAISSLQAEGTVGM
PCPAPGQTSWDFSVATPAQLLCRDNPSGGGPKWYRLQDVTTNLIFVTAIEVGNGSFVPKPLCSVAGGQTATPILQLIPKT
ESSNDAGFNRYGNDVGAGWTVVLTSSSGLPLGVAIAQTFCYYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52735; Mature: 52735

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVRRRMQGFTLPELMIGLAVFSMLAISTAMSRRNDGIVARGESFATGFIPYDAALESY
CEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCHHHHHHHH
VRKNRIALQAGTPIVGVANPLRPTAAELRAITDLPATYPLTLPDSGGAPIFRVDRLPGGC
HHHCEEEEEECCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCC
VGSTCDIEYYVGTTTPLLNADGNAAEGVLSYATRKLGGTAGFSDSVSPTVIAGRGGWTYT
CCCEEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC
NPQGGASGIAGIFGTYRTYSSSSVANYVLRGDTIDPALAGPLTVGGQTTFNGGTQVNNTL
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHCCCEEECCEEEECCCCEECCEE
GVTGAASVGTTLNVGGATTLNGATQVNGALGVSGATTMNAGASIGTTLNVGGATTLAGAT
CCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCHH
QINNTLGVTGAASVNRLVPTGLYALGAACAEESAIARATGGGAAICSGGTWRQLFLGAAV
HCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCHHEEECCCCEEEECCCCHHHHHHHHHH
GVACAPNGSDATDAASAKLTCINGTFRAISSLQAEGTVGMPCPAPGQTSWDFSVATPAQL
CEEECCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHH
LCRDNPSGGGPKWYRLQDVTTNLIFVTAIEVGNGSFVPKPLCSVAGGQTATPILQLIPKT
EECCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCHHHHHCCCCCCCHHHHHCCCC
ESSNDAGFNRYGNDVGAGWTVVLTSSSGLPLGVAIAQTFCYYN
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIFVRRRMQGFTLPELMIGLAVFSMLAISTAMSRRNDGIVARGESFATGFIPYDAALESY
CEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCHHHHHHHH
VRKNRIALQAGTPIVGVANPLRPTAAELRAITDLPATYPLTLPDSGGAPIFRVDRLPGGC
HHHCEEEEEECCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCC
VGSTCDIEYYVGTTTPLLNADGNAAEGVLSYATRKLGGTAGFSDSVSPTVIAGRGGWTYT
CCCEEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC
NPQGGASGIAGIFGTYRTYSSSSVANYVLRGDTIDPALAGPLTVGGQTTFNGGTQVNNTL
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHCCCEEECCEEEECCCCEECCEE
GVTGAASVGTTLNVGGATTLNGATQVNGALGVSGATTMNAGASIGTTLNVGGATTLAGAT
CCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEECCHH
QINNTLGVTGAASVNRLVPTGLYALGAACAEESAIARATGGGAAICSGGTWRQLFLGAAV
HCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCHHEEECCCCEEEECCCCHHHHHHHHHH
GVACAPNGSDATDAASAKLTCINGTFRAISSLQAEGTVGMPCPAPGQTSWDFSVATPAQL
CEEECCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHH
LCRDNPSGGGPKWYRLQDVTTNLIFVTAIEVGNGSFVPKPLCSVAGGQTATPILQLIPKT
EECCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCHHHHHCCCCCCCHHHHHCCCC
ESSNDAGFNRYGNDVGAGWTVVLTSSSGLPLGVAIAQTFCYYN
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA